Basic Information

Gene Symbol
CDC5L
Assembly
GCA_900480035.1
Location
UELX01007872.1:324-4083[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.2e-16 1.7e-13 51.0 1.5 2 46 9 54 8 54 0.97
2 4 4.5e-12 6.2e-09 36.4 0.1 1 45 60 103 60 104 0.93
3 4 3.4 4.7e+03 -1.7 0.0 32 46 580 594 575 594 0.88
4 4 8.5 1.2e+04 -2.9 0.3 3 15 601 613 600 615 0.77

Sequence Information

Coding Sequence
ATGCCGCGTATTATGATAAAGGGCGGTGTCTGGCGGAACACAGAGGATGAAATCCTTAAAGCCGCCGTGATGAAATATGGCAAGAATCAGTGGAGTCGAATTGCTTCCCTGCTGCACAGAAAATCGGCAAAACAGTGCAAAGCCAGGTGGTTTGAGTGGCTCGATCCGAGCATCAAAAAGACAGAATGGAGCAGAGAGGAAGACGAGAAGCTTCTTCACTTGGCAAAGCTCATGCCCACTCAATGGCGAACAATTGCTCCCATCATTGGACGTACAGCTGCACAATGTCTGGAGCGCTACGAGTACTTGCTCGATCAGGCacagaaaaaagaagagggagACGAGAGTGTGGATGATCCCAGAAAACTGAAACCTGGAGAAATTGATCCAAATCCAGAAACAAAACCAGCAAGGCCTGATCCCAAAGATATGGATGAAGACgAGCTGGAAATGTTGTCGGAAGCTAGAGCAAGATTAGCTAATACACAAGGAAAGAAGGCTAAAAGAAAGGCTCGTGAAAAGCAGTTAGAAGAAGCCCGTAGGCTTGCTGCTTTGCAAAAACGTAGGGAATTGAGAGCTGCTGGTATTTCGGTTGCAcagaagaataaaagaaaacggggtattaattataataccgAAATTCCATTTGAAAAGAAACCAGCTCCAGGATTTTATGATACATCTACTGAAGAAATTGATCCACTTGCTGCTGATTTCTCCAAATTAAAACAGCAAAATCAATTGACTTggcaagaaaaagaagaaattgaaagGAAAAAGGACAAACAGAAATTaaagcaaagaaaagaaaacgataTGCCAGCGAATATGATGAATGAAGAGCCAATTCGTAAAAGAAGCAAGCTTGTACTACCTTCTCCACAAATTTCTGATAAAGAACTACAGCAAGTAGTAAAATTGGGACGTGCTTCTGaggctGCTCGGGAAATCGTTATGGAAGGAGAAAATCACTCATCAGACAGTTTGCTAGCAGATTACTCTTTAACGCCTAGCGTGACTGCAACTCCAAGGACTCCAGCAGCCGTAGATAGAGTATTACAAGAAGCGCAAAATGTGATGGCACTCACGCATGTTGATACGCCTCTGAAAGgaGGTGCAAACACGCCTTTAATAAATACTGATTTCAATTCGGTACAGCCGGCAGCGAATGCTGTAGCTACACCGAATACAGTTCTAACTACTCCATTCAGATCTCAGAGAGGTGAGTTAACTTCACCAGCACCGTTTAGCACACCAGGCTCTGTCAGAGGGCAGGGTGTTCCTGGTGCTACTCCAGTTAGGGATAAACTAAATATCAATCCGGAAGATGGGGTGGAAGTGGCAGAAACACCGGTCATTCGGAAACAGgCAAAAGATCAGTTACGTATGGAATTCAGTTCATTGCCAGCGCCTAAAAATGATTTCGAAATAGTTGTACCAGATGAAGATATTACTGAAGAAGAAAGCAGCAGTGCAGTGAATGATCAAGTTGAGGATCAAGCTGATGTAGATGCAAGGAAGCAGCAGGAATTAATTGAACAAcAAAAACGAGAACTGGAAAAGCGTTCACAAGTTATTCAAAGAGGACTTCCACGACCTATCGAagtaaatcttaatattttaagaccTTCAAATGAAGTTTCCTTAACTGATTTACAAAAggcTGAAGAATTAATTAAGCAAGAGATGATCGTTATGATGCAGTACGATCTAGTTCAGAATCCTGTACAACCTACGGGAAAACGAGCTGCGTCGATTATAAATCAAGCGCAAAATTACTTAGAACAGCATCCTTATGAAGAATTTACCAAAGAAGAACTCGAAAATgccaaaaaattattaaaagatgaaaTGGCTGTTGTAAAAGAAGGGATGGCACATGGTGATTTAAGCCTTGAATCATATTGTACAGTTTGGGAGGAATGTTTATCCCAGgttttatatttagaaactCAGAAAAGGTATACAAGAGCTACATTGGCTTCAAAAAAGGATAGAATTGAAGCTTGTGAAAGAAAATTGGAAGAAAACCGAGGTCACATGACTGGTGAAGCTAAAAGAGCTGCTAAAATGGAGAAGAAATTGAAAGTATTGTTAGGAGGTTATcagaatcgagcccaagttttaataaagcaatataACGATTTAAATGATCAAATCGAACAATCAAGATTAGAATtgtctattttcaaatttttggaaaaacaaGAAGAAGCAGCTTTGCAAAAACGACTTGATTCTTTAACTGAAGATGTAAATcgacaaaaagagagagaacatAGATTACAAAATCGCTATTCACAGTTAAAAGAGAAACTACACGAGTTACAAACGCAAtcttactaa
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGDESVDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGISVAQKNKRKRGINYNTEIPFEKKPAPGFYDTSTEEIDPLAADFSKLKQQNQLTWQEKEEIERKKDKQKLKQRKENDMPANMMNEEPIRKRSKLVLPSPQISDKELQQVVKLGRASEAAREIVMEGENHSSDSLLADYSLTPSVTATPRTPAAVDRVLQEAQNVMALTHVDTPLKGGANTPLINTDFNSVQPAANAVATPNTVLTTPFRSQRGELTSPAPFSTPGSVRGQGVPGATPVRDKLNINPEDGVEVAETPVIRKQAKDQLRMEFSSLPAPKNDFEIVVPDEDITEEESSSAVNDQVEDQADVDARKQQELIEQQKRELEKRSQVIQRGLPRPIEVNLNILRPSNEVSLTDLQKAEELIKQEMIVMMQYDLVQNPVQPTGKRAASIINQAQNYLEQHPYEEFTKEELENAKKLLKDEMAVVKEGMAHGDLSLESYCTVWEECLSQVLYLETQKRYTRATLASKKDRIEACERKLEENRGHMTGEAKRAAKMEKKLKVLLGGYQNRAQVLIKQYNDLNDQIEQSRLELSIFKFLEKQEEAALQKRLDSLTEDVNRQKEREHRLQNRYSQLKEKLHELQTQSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309433;
90% Identity
iTF_00690108; iTF_00691018;
80% Identity
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