Basic Information

Insect: Eupelmus urozonus
Gene Symbol: clz9
Assembly: GCA_900480035.1
Location: UELX01006900.1:5666-8792[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.5e-10 1.7e-07 31.3 0.0 2 35 46 79 45 85 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.5e-10	1.7e-07	31.3	0.0	2	35	46	79	45	85	0.92

Sequence Information

Coding Sequence: atgacAAAAGTCAGAAAAACGTCAAGgtctaagaaaaataaaaatactgatgAAACtggcaagaaaaaaaagtgtattaaaaagaataagagctcaaaagccataaaaaagaagaaaatgattaACAATTACAATGATGAGTCAATCAAGAAAGCCTTTGAAGCAGTCAAGGAGGGTACGTCACTTAGAATAGCTGCACAAAAATATGGTGTACCGAAGAGTACTTTGCACTGGAGACTGACTCACAATAGTTCACAAAATATCAGAAAAGGTCCCAAGACAGTGCTAACTCAAGAAGAAGAACAGGATATAGTGAATTGGATTTTAGAAAGCCAAGAGCGAGGTTTTCCAGTAACCAAGAGTAGACTCCTGGATTGTGTACAAAAATTCATTGCTAATAGTAAGAGAGACAATCCATTCAAAAACTCACGTCCAGGCAAACATTGCACAAGAGCTTCTGTAACTGAAAATGAACTGCGAGGTTGGTTTTCATATGTGAAAGAGCGTATTGAAAAACTAGATCTGTTAGATATAGATTCAAATAGGCTGTTTAACCTTGATGAATCAGCTTTTAAATTAGTGCCAGAAGGAGACAAAGCTATAGCGAAGAAAGGAGCAAGAACTGTTTATCGAATAGTTGGATGTAGTGAGAAAGCAACTGTAACAGTTCTGTTTACTGCATCTGCTGCTGGTGTATTAGCTCCCCCGATGATTCTTTTTGAACTCAAGACAGCACCTAAAAGAAGTACGCTCCAGTGGATTCCTCAAGGTTGGGGTGTGGGGAATTCAGAATGTGGCTGGATGACTGGAGAGAGCTTTTacagttacataaaaaatattttctacaagtGGCTTGTAGACAACAAgtatatatttccttttttgctATACGTGGACAACCATACATCACATGTTAATTtgcaactattaaaattttgtaaggaaaaaaaaatagaaatcattGCTCTCTACCCAAACTCGACACATATTATACAACCACTTGATGTGGCCTTTTTCCAtccacttaaaataaaatataaagaggCTGTTGCGcagtataaagttaaaaataaaattattgatttaaaaaaatgtatggttGCTCCAGCCCTTCAGAAGGCTATTGACTCCATGGATTTTAGAGAAAGTATAATACAGGGATTTAAAGGAAGTGGTTTATACCCTCTTGACCCACAGTCAGTTAACTACAATGTATTTAgaaaagtaaagaagaaaaaatttgtgaatGCAGCAGATATGATTTCTTTTGGTAcgcaagaaaaaagtaatgaagataataattcaatgttattgaattattttgaaaaaaatatatctgcaGAAATTCTTGAAGCTTTTCGAAGAGATGAATTGGCTGGAACTTGGACAGGAGACAGTAGTCAACAGGGTCTTTTTGAAATGTGGCTTAAAATGCGAATGCTTCATAACAaacaatctAATGAAGTAGAAGAGCATAACGTCTCTAACGATTACATTCAGAATGAGTTGATAAGCAATACCGGTGCTACTGTAGAGAATGTTAGTGAAGATGCAGTATTTGAAGTTGATAGTTTATACCTAAGTCAGGAAGGTGTTATCGAATCTCATGCAACTAACGTGCCTGATGAAATTGAACTTGAAGATACTTGGGATTCGGGCATTTTGGCTGATCTTAGCAACGATTGCAGTACCACTGAAATAGAATTTTTGGATAAACAAGGTAATAAGAGAACTGCAGCTATTATTCATGTGATTCCAGATTCTGAAAGCTATGCGAATAGCAATGACACAATTTCAAAGCCAGTAGTAGAAATctgtacacaaaaaaatgttgaaaatgttaataattcaaGTACTGAAAGTGAGAACCGAGAAACTTATTGTAAGGTAACTAATATTCAGGTATCACCATGCAGTGAAGTTCATGATCCACAACTTATCAAAAGCATATCCAGCGCTGATGCCTCTAATGTTGAAATTGATACTATGAAAGActcaaatataaatgaatttgtaCAAACTATAGATATTAGTGAAGctGCAATTCTCGATTTATCTGTGAGTAATCATTCAAGCAACAAAAATGATGAAAACGTTGTATCAACTGTCTCTAAAACCGATTCTGCAAAGGTACTCCGAGAAATTCCTTTGAGCCAAAATGAAAGTATCCACTTCCTAATCAATCAACACCCTATATCAAAAGTAAttactgAAGAATTCAAGAAAGTTTTTACAGTAgataaacttcataaaaaaaataaaaaaaacaaaaccttcGAAGGTACATCTGCATATTTTATAGATGACATGATTACAGCTTTggagaaaaaagagaatgaaaaaacTCTCAAAGAACACGAAATTTTGCTTAATAAACAACAGCgagagaaatataaattaataaaagcaaaagaattAGATATCAATAAGTCACTAAAAGAAGCCAAgtccaaattattaaaacacaagaaagatttgaatattgaaataaaaaatttgaagtcaATGATTAAATCTGAAACTaccaaagaaaatattgaagcgctcaaagaaaaattacagaATTTGACTAAACAATTAGAAGAAACTGACAAGTCTATTCACCTGCATGAAATGGAAGCTTTAGCTCACAagttgcaaattaaaaaagagaagctgtag
Protein Sequence: MTKVRKTSRSKKNKNTDETGKKKKCIKKNKSSKAIKKKKMINNYNDESIKKAFEAVKEGTSLRIAAQKYGVPKSTLHWRLTHNSSQNIRKGPKTVLTQEEEQDIVNWILESQERGFPVTKSRLLDCVQKFIANSKRDNPFKNSRPGKHCTRASVTENELRGWFSYVKERIEKLDLLDIDSNRLFNLDESAFKLVPEGDKAIAKKGARTVYRIVGCSEKATVTVLFTASAAGVLAPPMILFELKTAPKRSTLQWIPQGWGVGNSECGWMTGESFYSYIKNIFYKWLVDNKYIFPFLLYVDNHTSHVNLQLLKFCKEKKIEIIALYPNSTHIIQPLDVAFFHPLKIKYKEAVAQYKVKNKIIDLKKCMVAPALQKAIDSMDFRESIIQGFKGSGLYPLDPQSVNYNVFRKVKKKKFVNAADMISFGTQEKSNEDNNSMLLNYFEKNISAEILEAFRRDELAGTWTGDSSQQGLFEMWLKMRMLHNKQSNEVEEHNVSNDYIQNELISNTGATVENVSEDAVFEVDSLYLSQEGVIESHATNVPDEIELEDTWDSGILADLSNDCSTTEIEFLDKQGNKRTAAIIHVIPDSESYANSNDTISKPVVEICTQKNVENVNNSSTESENRETYCKVTNIQVSPCSEVHDPQLIKSISSADASNVEIDTMKDSNINEFVQTIDISEAAILDLSVSNHSSNKNDENVVSTVSKTDSAKVLREIPLSQNESIHFLINQHPISKVITEEFKKVFTVDKLHKKNKKNKTFEGTSAYFIDDMITALEKKENEKTLKEHEILLNKQQREKYKLIKAKELDINKSLKEAKSKLLKHKKDLNIEIKNLKSMIKSETTKENIEALKEKLQNLTKQLEETDKSIHLHEMEALAHKLQIKKEKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -