Basic Information

Insect: Eupelmus urozonus
Gene Symbol: -
Assembly: GCA_900480035.1
Location: UELX01015341.1:560-3532[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.6e-12 3.9e-09 36.6 0.0 1 44 50 93 50 94 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.6e-12	3.9e-09	36.6	0.0	1	44	50	93	50	94	0.90

Sequence Information

Coding Sequence: ATGGTAGGAAaccgaaaaataaagaaacttaaaaGCGACAGTAAAAGTAACAAAACTGTGTCTAAAAAAcatgttgaaaaaaatcataaacaaagtTCCGTGGtatctaaaaaaaagcaaagagtttataaaaaaagatttttatattctgaAGAAAGTTTGAAAGAGGCTATTACTTCTGTTAAAACTGGCAGCATGTCTATGAATAAGGCATCCAAGCAATATGGTATTCCTATTggtactttatttaataaagtacatGAGAAAGTTTCTTTAGAAAGGCGAATGGGACCTTTGCCTGTTTTAACATTGGAAGAagaaaatagagtaaaaaagtGGATACTCGACAAAGCAGCAATTGGTTACCCAATGCACCAAATGATAGTCAGGCAGGCAGTCAAAGGTGTTCTTGATGCAGTTCCTCGAACAAACCCTTTCAAAAACAACTGTCCAGGGATAAAATggttagaattatttttaaaacgtcatCCTgaagttaaaagtaaaaatacagaAGTTTTATGCCATGCAAGAGCTGCTGTGacagaagaaaaaataagaatttggtTTCaggatttaaaaaactatttagctGAAATAAATGCTCTTGATATTCTTGAAGATTCGTCAAGAATGTACAACATGGACGAAACTGGAGTTGCCTTATGTCCCAAGACTGGAAGAGTTTTGGCTGCTGCAAaggagaaaaatgtatatttcattTCACCAGGTGCAGAAAAGCAGAACATAACTGTACTGTGTTGTTTTAGTGCATCTGGATCTGGCATTCGCCCAATGATCATGTATCCCTATCAGCGTTATGTACCTAAAGAAGTTGTAAATTCTGTACCTGATGGATATGCCATTGGGCGGAGCGAAAATGGTTGGATGACTACTGCTGCTTTCTACGAGTACattgtaaattgtttttatcctcaactaaaacaaaatggaataaaatttcCAGTTCTGCTATTGTTTGATGGACATAAATCCCACATTAGTATCGAGTTACATGATTTTTGTAATCAAGTtggaattatattatattgttttattgcacATGCATCCCATATAATGCAGCCCCTTGATGTTAGTTTTTTTAGACCCTTTAAAGTATGTTGGAAACAAACGGTAGCAGATAATGCACAAAAATCTAATCAAGtcataacaaaaatttcttttgctcCATTATTTGACTCAGCTTATTCTAAAATGCTCCAGAAACCAGAAATAGTCAAAAAAGGGTTTGAAAAATCAGGCCTTTTTCCATTCAATCCTGACAATGTAGATTACTCTAAGTGTATCTCAACAAGaagagaaagtataaaaaattcttcagaaAATTCTGAAAGTAATCAAGATAATACCAGTAAAAGTGATATAGATATAGAGGTTCACATACCACCTGAAGTTTTACAGGAGTTCGaggaacatttatttttaggaacTGTACCCAAAgatgagaaaattttattttctatttggaaACAGATGAAACAACCCAGTGGCAGTTCTCATCTTCTAAACGAATCTAGTAATGATTCAAGTATTTCAGAAGAATCGTCAACTTCTGAACCAGTTATTCTCTTAAGTGCCCCTGTAACATTAACAACAGAAGAGAGCTTGGACTGTGAGTTAACTAATTATAACCAAAAtgtaccaaaaaatattattcaaactacATGtgataatttagaatataatgatatagaaaaaatggatattgatattatagatataaataatgtacCTAAATTATTTGTCTCTAAGTGTAATGAAACTGAAAATGTGAAAGCGATACTTCATCAAACATATATGGATCAGAATCTTACAGATAATGTATCTGGTATAGATGAAAGTAttggtaataataatgataaaattaccTTAACCAGTAAATTCAGCGAAAAGggtaataatctttatttagaCCATCCGATAGATTTAACTTGTGGCTCAGTTGATAGTTTCATCACAAGTATCCCTATTTCTAatacatttgaaattattagaaaaccTGATTtggatAATAAACATACTGAAATATCTCAAGCACTTGAAAGCAATTCAAAGTCTGCTGGAGTAATCAAACATGATTCTACACTCAATTTGATATCAGATGATTCTACTACATAtaaaattgatacagATGCTACTAAACAAActctattttataatcaaaatgcTGAAAGTATAGTTGcatctaatttaaatattaaaagagaacTTTTAGATAATTCATTGGATTCTGTAAGTCATATTGATTCAGTATGGAAACAACAATTACATTTCCCTCGCATCGAAgcctcgaaaaagaaaaaaagtaaagtagaTGTAGCTCCCACTTATGCCTTAACATCTGAACAgtggaaatcaaaatatttacaaaaaatacaagaagaagaaagaattaaagaagaaaaagagttaaaaaagaaatctaaaattgtagaaaaagaaaataaattgaaaataaagcaaGAGCAAATTGAGCAAAACAGAAAATCAAAACGagatgaaaaggaaaaaaaaattaaaataaagctagaagaaatggaaaagaaaaagaaacttagagtggaagaaagagaaaagaaaatgaaattgaaagaatttgaaaaaaagcaactaaagaaaatcaaaatacagaaaaaattagaGCAAAATAAGTTAAGAGAATTACAAATTAACGAGCAAAAACCCAAGTGA
Protein Sequence: MVGNRKIKKLKSDSKSNKTVSKKHVEKNHKQSSVVSKKKQRVYKKRFLYSEESLKEAITSVKTGSMSMNKASKQYGIPIGTLFNKVHEKVSLERRMGPLPVLTLEEENRVKKWILDKAAIGYPMHQMIVRQAVKGVLDAVPRTNPFKNNCPGIKWLELFLKRHPEVKSKNTEVLCHARAAVTEEKIRIWFQDLKNYLAEINALDILEDSSRMYNMDETGVALCPKTGRVLAAAKEKNVYFISPGAEKQNITVLCCFSASGSGIRPMIMYPYQRYVPKEVVNSVPDGYAIGRSENGWMTTAAFYEYIVNCFYPQLKQNGIKFPVLLLFDGHKSHISIELHDFCNQVGIILYCFIAHASHIMQPLDVSFFRPFKVCWKQTVADNAQKSNQVITKISFAPLFDSAYSKMLQKPEIVKKGFEKSGLFPFNPDNVDYSKCISTRRESIKNSSENSESNQDNTSKSDIDIEVHIPPEVLQEFEEHLFLGTVPKDEKILFSIWKQMKQPSGSSHLLNESSNDSSISEESSTSEPVILLSAPVTLTTEESLDCELTNYNQNVPKNIIQTTCDNLEYNDIEKMDIDIIDINNVPKLFVSKCNETENVKAILHQTYMDQNLTDNVSGIDESIGNNNDKITLTSKFSEKGNNLYLDHPIDLTCGSVDSFITSIPISNTFEIIRKPDLDNKHTEISQALESNSKSAGVIKHDSTLNLISDDSTTYKIDTDATKQTLFYNQNAESIVASNLNIKRELLDNSLDSVSHIDSVWKQQLHFPRIEASKKKKSKVDVAPTYALTSEQWKSKYLQKIQEEERIKEEKELKKKSKIVEKENKLKIKQEQIEQNRKSKRDEKEKKIKIKLEEMEKKKKLRVEEREKKMKLKEFEKKQLKKIKIQKKLEQNKLRELQINEQKPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -