Euro013443.1
Basic Information
- Insect
- Eupelmus urozonus
- Gene Symbol
- lov
- Assembly
- GCA_900480035.1
- Location
- UELX01000754.1:6441-9268[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.8e-06 0.0033 17.6 0.0 1 37 207 243 207 250 0.87 2 4 5.4e-11 3.8e-08 33.5 0.0 8 39 264 294 257 298 0.91 3 4 7.1e-05 0.05 13.9 0.0 6 34 314 341 311 346 0.91 4 4 2.7e-10 1.9e-07 31.3 0.0 4 37 372 405 369 410 0.93
Sequence Information
- Coding Sequence
- ATGTCAGAGTCCTCGCCGACGGGCCAGCAGGCGGACACGTCCTACTGCTTCAAATGGAGCAACTACCAGGGTCACCTCTCCGAGGTCGTGCGCCAGCTCCTCGACGAGGAGTGCATGGTCGACGTGACGCTTTACTCCCAAGGCGAGCGCATCCAAGCGCACCGGCTTGTTCTCTGTGCCTGCAGCACTCTTTTTCAGgaaaTTCTCAGCCAGGTTAATGATGAACATCCAACCATCATTCTGAGCGATATATCACCACAAGATGTAAGGTCAATTGTAGAGTTTAGTTACAACGGAGAAGTTAGAATACCTGTTgaaaacatcaataatttattagatgCAGCACATTCTTTGAAAATATGCGGTTTGATGGAAATTGAAGGACTTGATGAAACTGAAATACCAAATGATAGGGATGAGATTGAAGAAACATATATACTTAACGAAGTACCACCAAGTAGTAGTAATGATGATTATctggattttgatgaaaaatctatagagtcaaaaagaaaaagaaagaaagattcagatgatgattttgattttataagtcccattagaaaaaataatggcAAGATGAAAAGGCAAAGAAAAAGTGTGTGTAAAAAAGAATACACAGATGAAATGTTTAATCAAGCTattgaagatataaaaaatggaaaatcacTATTAGAGGCTGCTGCTCAGAATCAAATTCCTAGATCTACACTTTATATGCGTGCAAAAGTATTGGGAGTACATTTGAATCCTATTAGAAATGAATATACTTATGAAGATGTGAAAGGAGCTATAGAAGCAGTATGCgATGGTGCTAGTTTGCAACAAGCAGCAGATTGTTATGGAATTCCAAAAACAGTCTTGTGGAGGAGAATTCAAAAAGCAGGTATTACAACTCCTAGACgtgaaacaagaaaaaattatgccTGTGAAAAGAGAGAAGCTGCTGTAAAAGCATTAGCGAAAGGGGAGTCTCTCACAAAAGTTGCAAATGAATACCAGattCCAAAAACAACGTTATTCcgagataaagtaaaattggtAGATCAAGGAAAATTACCAGGATCATTTTGGAAAAAGCGTAAAACTGATActgaagaggaaaaaaaatctcGTCTAGAAGAAGCTGTATCAGCATGCAAAGATGGTAAAATGTCTCAAGCATTAGCATCTTCAACTTATCAAGTACCTAAAACAACAATATGGAGACGTCTTCATcaagatgagaaaaaaatagttcCATCACCACTTCCcaagaaaaaagaatcaaaagttATTGAATCGCCTATTAAAGAGAAAACGGCGGATGTAAAAGCGGAAGAGTTGAATGAAGCCGATTTTGAAGCTTATTGCCCAGATGAATCAGAAATGAGTATAACATATATTGATGAAAGTAATATGACAGACGATCCAGTTATAATTTTGGCTAGTGGAGATGTAGACAATCTAAATTTACCAAATAGACCTTTAGTAGTTGTGCAGAATGATGGTAATGATGAGAATTTTATTTCCTGTGGACTGGAAGAATTAGATGAAAATTCAGCATTTGAATCAAAGAGTTAA
- Protein Sequence
- MSESSPTGQQADTSYCFKWSNYQGHLSEVVRQLLDEECMVDVTLYSQGERIQAHRLVLCACSTLFQEILSQVNDEHPTIILSDISPQDVRSIVEFSYNGEVRIPVENINNLLDAAHSLKICGLMEIEGLDETEIPNDRDEIEETYILNEVPPSSSNDDYLDFDEKSIESKRKRKKDSDDDFDFISPIRKNNGKMKRQRKSVCKKEYTDEMFNQAIEDIKNGKSLLEAAAQNQIPRSTLYMRAKVLGVHLNPIRNEYTYEDVKGAIEAVCDGASLQQAADCYGIPKTVLWRRIQKAGITTPRRETRKNYACEKREAAVKALAKGESLTKVANEYQIPKTTLFRDKVKLVDQGKLPGSFWKKRKTDTEEEKKSRLEEAVSACKDGKMSQALASSTYQVPKTTIWRRLHQDEKKIVPSPLPKKKESKVIESPIKEKTADVKAEELNEADFEAYCPDESEMSITYIDESNMTDDPVIILASGDVDNLNLPNRPLVVVQNDGNDENFISCGLEELDENSAFESKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00693104;
- 90% Identity
- iTF_00693104;
- 80% Identity
- iTF_00693104;