Basic Information

Insect: Eupelmus kiefferi
Gene Symbol: -
Assembly: GCA_030522745.1
Location: JAPYZB010002483.1:2582-6636[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.046 12 8.7 0.6 2 23 326 348 326 348 0.94

2 8 4.6e-06 0.0012 21.2 0.9 1 23 366 389 366 389 0.98

3 8 1.5e-05 0.0039 19.6 1.2 1 23 429 451 429 451 0.98

4 8 1.9e-05 0.0047 19.3 2.2 2 23 457 478 456 478 0.96

5 8 0.00026 0.064 15.8 6.4 1 23 484 506 484 506 0.98

6 8 0.00021 0.054 16.0 4.4 1 23 512 534 512 534 0.97

7 8 5.7e-05 0.014 17.8 2.3 1 23 540 562 540 562 0.97

8 8 0.014 3.6 10.3 3.8 1 21 568 588 568 589 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.046	12	8.7	0.6	2	23	326	348	326	348	0.94
2	8	4.6e-06	0.0012	21.2	0.9	1	23	366	389	366	389	0.98
3	8	1.5e-05	0.0039	19.6	1.2	1	23	429	451	429	451	0.98
4	8	1.9e-05	0.0047	19.3	2.2	2	23	457	478	456	478	0.96
5	8	0.00026	0.064	15.8	6.4	1	23	484	506	484	506	0.98
6	8	0.00021	0.054	16.0	4.4	1	23	512	534	512	534	0.97
7	8	5.7e-05	0.014	17.8	2.3	1	23	540	562	540	562	0.97
8	8	0.014	3.6	10.3	3.8	1	21	568	588	568	589	0.93

Sequence Information

Coding Sequence: ATGTGCGCCCGCCTGCTGGCCTGTCCTCTCTGCTCTCAGCCTGGCTTCCTCACCCTGGACGCTCTACGCGCCGGCCTGGTGAGCGTGGCCACGCGGCCCCTGGCCTGTCCAGTCTGCAACGAGGTACTTCTCGGCATCGACAAGCTGACGATTCACCTGTTCGGCCACACTTTCAGCCAGGGCCAGGTGGTCGGCGGGGGCAGCGAAACGGCCAAGCTGATCGAGGTCCGCAACGCCCAGGCTATCCAGCAATGGAACGTTCTGAACGAGAACAAGCGGATTGAGGAGGCTAATCGTGAGACGACGGGCAGCGGAATCTATATACCGATCGATGAGATCGAGACGTTCAGGAACCTGACGGCCATCAAAGATGCCGGTAGTGTCATTCCCGTTAACAATGCTCAGAATGTTACCGTGGATACGAAGGCGCCTAGCCAGGTGATTTTCCTGCAGAATGTCTCAGCTCAGCCCAAGATAATCACCGCCAATCTCATCGGTCAGACAGTCGAGCAACAGGAACAGCAGCCAATTGCTACGGGAATCTATCAGACAGTTCCGGTCacacagcaacagcagcagcaacaggcAACTAATGAGCCGCAGGCTCCGATGGATCAGACCTGCAGGCAAGAGGACATTCAGGTGGCCGAGGCTAGCGAATCCTCACCGAATGTAGTGATCTCCATTAATGGAACCGTCGACAAGAATGGCAAGGAATCGTTCACACAGaccTCTTGGAACGAAAACGCGAGCCCTGCACCGTCATCTCCGTCAGTTTCCGAGTATCCACCCTCACATACCGACAGATTGGCAGACCTCGTTAAAAACGCGCAAATAACGGCCTCACCTTTGGGCAATTTTCACGAGTCGTTTGATTGCTCGAGGCCACCAACGCCCCCTGACTCTACTTCCTCACCTATACCGAAACCGAATATCAAGTCTCAGAAGATTCTCTCAAGCAATGAGCGAAGCGAACGCTGCAATATCTGCGGTTTGCATTTTGCCAGCCGTAATATTCTCATACTACACAAAAAGGTCATTCACATGATCCAGGAAAAAGATCTGAACGTTGCTCCGGAGGATCTTATGAAGAATTATCCCTGCCACCTTTGCACCAAGGTCTTCAAGATGCGCGGTAGCTTGATGCTCCACATGAGAGTTGCACATCCTAGCATCAATACGAACGCCAACACAGCTTCAAAAGAGACTCCCAAACAAGAGCCGGTAAAGGAAAAACCGAAAGATCCTGAAGCAGTGCCGCAGAATGGTGATCCTGAGAACAGTTTTAACTGCCCGATTTGTGGAAAAGGCTTCAGAAAGGAGCAACACGTTACGCAGCACTTGAAAATTCACGACGGCAAACAGTGGGAATGTGATGTGTGTAGTAAAATGTTTACTAcaaaatactttcttaaaaaacacaaaagacTTCATTCGGGTGAAATGCCTTACAAGTGCAGTATATGCGACAAGACATTCACCTTTCAGCAGTCCTATCACAAGCACAGACTTTATCATAAGGATGACAAACCACATTCGTGTACTACTTGCGGTCGTTCTTTTAAAGAACTTTCTACTCTGCACAATCATGAAAGGATTCATACGGGAGAGAAGCCTTTTGCTTGCGAATCCTGTGGAAAATGTTTCCGACAACGAGTTTCTTATTTAGTACATAGACGAATTCATACTGGAGTTATGCCATATAAATGCACAGCATGTGGTAAAAGCTTCAGATATAAGgtcAGCCAGAGAACTCACAAATGCTCACAACAACCACCTGGCACAGTCGTACATCAAAATAGTCTCGTTCAACAACTGAAGAATGCATCCAAAATGAAAGAAACGAATGGGTTTTCTTCACAAGATGAAGAGTTTATGGATACACCAAGTACAAGTGAAGAAAATCAATATGTTTTTGTTCTCAATGATGAAGGTCAACATGTCTTGAAACGAAAGTTAGATGTTGAAAATACAAATGATAACAAtgtaaatcaagaaaaaaataaagaaaatacaaatcGAAGTAATgaatttatgcagaatatgtGGAATCAAGATTCCGCTAGTGAAATGGACTTCAAAGGAAATAGTTCAAAAATTGAGGGCGAAACATCTAATGTAATAACAGATACGAATTTATGGAACGAAACAgctaacaataaaaataattctccgTTATCAGACTGTAGTAGTATTTCTAAGCAGTTTAATGTGAAAACATTAAATAGTGAATTTACAAATGAGATGTGGAATCAAACACCATCGCGTGAAGTGTCTTATGATAAAATATCTGgtaaaaatcaatcaaacaaTTCTAATGATTTCTTTTCTATGGTCATGTCTCCTCTAGAAAATGAAATATCCTCTCCCTCGACAGAAATGGAACATTTAAGGCTGTCTTCGCCGGTGAGTAATCTAGAGAAATCACCTGACGCTACTGACTGCTTTCCACCAATGAACAACAGCGCAAACGCTGTCCAGGTAGACCATAGTAATATAGAAGAACATTTCAGTGAGAATAATGTTAATCTTTCCACACTTCAAACCATTAACGAAGACTCATTGAAGGAATTGTTATACAGCATTGctgataaatag
Protein Sequence: MCARLLACPLCSQPGFLTLDALRAGLVSVATRPLACPVCNEVLLGIDKLTIHLFGHTFSQGQVVGGGSETAKLIEVRNAQAIQQWNVLNENKRIEEANRETTGSGIYIPIDEIETFRNLTAIKDAGSVIPVNNAQNVTVDTKAPSQVIFLQNVSAQPKIITANLIGQTVEQQEQQPIATGIYQTVPVTQQQQQQQATNEPQAPMDQTCRQEDIQVAEASESSPNVVISINGTVDKNGKESFTQTSWNENASPAPSSPSVSEYPPSHTDRLADLVKNAQITASPLGNFHESFDCSRPPTPPDSTSSPIPKPNIKSQKILSSNERSERCNICGLHFASRNILILHKKVIHMIQEKDLNVAPEDLMKNYPCHLCTKVFKMRGSLMLHMRVAHPSINTNANTASKETPKQEPVKEKPKDPEAVPQNGDPENSFNCPICGKGFRKEQHVTQHLKIHDGKQWECDVCSKMFTTKYFLKKHKRLHSGEMPYKCSICDKTFTFQQSYHKHRLYHKDDKPHSCTTCGRSFKELSTLHNHERIHTGEKPFACESCGKCFRQRVSYLVHRRIHTGVMPYKCTACGKSFRYKVSQRTHKCSQQPPGTVVHQNSLVQQLKNASKMKETNGFSSQDEEFMDTPSTSEENQYVFVLNDEGQHVLKRKLDVENTNDNNVNQEKNKENTNRSNEFMQNMWNQDSASEMDFKGNSSKIEGETSNVITDTNLWNETANNKNNSPLSDCSSISKQFNVKTLNSEFTNEMWNQTPSREVSYDKISGKNQSNNSNDFFSMVMSPLENEISSPSTEMEHLRLSSPVSNLEKSPDATDCFPPMNNSANAVQVDHSNIEEHFSENNVNLSTLQTINEDSLKELLYSIADK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00691418; iTF_00693262;
90% Identity: iTF_00691418; iTF_00693262;
80% Identity: -