Basic Information

Insect: Eupelmus kiefferi
Gene Symbol: -
Assembly: GCA_030522745.1
Location: JAPYZB010011905.1:1133-3283[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3.8 9.7e+02 2.6 0.1 1 20 302 321 302 325 0.82

2 10 0.026 6.6 9.4 0.6 1 23 332 354 332 354 0.98

3 10 0.0081 2 11.0 5.3 1 21 360 380 360 382 0.94

4 10 3.5e-05 0.0087 18.5 0.9 1 23 388 410 388 410 0.97

5 10 1.4e-05 0.0034 19.8 3.4 1 23 416 438 416 438 0.98

6 10 7.6e-05 0.019 17.4 0.4 1 23 449 471 449 471 0.98

7 10 2.8e-08 7.1e-06 28.2 0.4 1 23 477 499 477 499 0.99

8 10 3.7e-06 0.00093 21.5 0.6 1 23 505 527 505 527 0.95

9 10 9.4e-05 0.024 17.1 0.1 1 19 533 551 533 555 0.96

10 10 5.7e-06 0.0014 20.9 0.4 1 23 561 583 561 583 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3.8	9.7e+02	2.6	0.1	1	20	302	321	302	325	0.82
2	10	0.026	6.6	9.4	0.6	1	23	332	354	332	354	0.98
3	10	0.0081	2	11.0	5.3	1	21	360	380	360	382	0.94
4	10	3.5e-05	0.0087	18.5	0.9	1	23	388	410	388	410	0.97
5	10	1.4e-05	0.0034	19.8	3.4	1	23	416	438	416	438	0.98
6	10	7.6e-05	0.019	17.4	0.4	1	23	449	471	449	471	0.98
7	10	2.8e-08	7.1e-06	28.2	0.4	1	23	477	499	477	499	0.99
8	10	3.7e-06	0.00093	21.5	0.6	1	23	505	527	505	527	0.95
9	10	9.4e-05	0.024	17.1	0.1	1	19	533	551	533	555	0.96
10	10	5.7e-06	0.0014	20.9	0.4	1	23	561	583	561	583	0.98

Sequence Information

Coding Sequence: ATGTCTTGGGAAATTAGCTGGGGAGACTTGTGCCGAACTTGTATGGATGCCGAAGGTAATTTGATATCTTTATATAGCAACGATGATGAAGACAGCGAAAATGATTTGCCACAAAAACTTTCTGAATTAACATCGATAGAGATCGATAAATATGATGGCTTACCCacaaaaatatgcaataaatgTGTTAATAAAACGAAcatgttttttgaatttaaataccAAGTTCAAGAATCTGATAAAAAACTCAAAGAGATGTTTCAGGAGCAAATGGTTTGCATTGTTAAAatggaACAAGGTGAAGATGTTGAATATACTTTACTGGAAACAGAATCAGAAAACTGCAATTCTGTTATAAATGAAGAAGATACATCTTGccaaaatattaatcaaaatagcTTTACAAAAATAGACCAGACAGAAGAAATAGATGAAAATACTGTTGCTACAGAACAATTAAATAATGCTTGCgaaactgtaattttaaatgtaaataaggACTTTAATGATGTGCCAGATGATAGCATTTTAAGTGGAGTACagaatattcatataataattcaaGCTGAGGATTTGAATACAATTAATGGAATTAGTGAATCTCAGTTTATCGAAAATCAAAGTAATGATGAGGGCCAAAATCCTGAAACTTTGTCTTCCAAACTAGgagaaatagaaaatcaaacaGAAATTGCTTACAATATTCAAGTCTCGTCAgaagatataaatataacagACGCGAATGAATCCACTTTTATAAATCCTACTTCAGATGATAATAATGTGCCACAAGATGATAGTGATTCTGATGACTATATGGATTCAGAGCAAAATATTGTCGGTAGTATAAATGATACAATAACCAAAGTTAAAGAAATCAAAGAAGGTGGTAAAATTGTACAATATCAATGTACACTgtgtttacaaaattattcagTACTTGCAGAAGCTTTGAGCCACTTAGTAGAATTACACGTGCCAAGTGGTGGACCATTCTACTGTGTTGTTTGTGAAATGGATTGTAACagtattaaagatttaaaagcaCACGTAAAAATACATAAAGGTCCAACACCTTACAACTGTTTTCTCTGCAATAAATCTTATGTAATGAAGAGGTATCTTAAGCGGCATATGTCTTGTCATTTAGATTTCCCTCGGCATCGGTGTGCAAAGTGCGGTGAGCGATTTAAAGTTAAAAGTGACTTAGATGCCCACATTACATCTCATTCTCAAGAAGCAGCTTTCAAATGTAGTCAATGTCCGCGAATATTCAATCATAAAGGAAATTATAAACGCCACTTGATTTCTCATCTTGATCCTCAAGGTCTTCATTTACCAAAATATCCATGTAATGTATGCAatagaagatttttaaataatcgtaCTTTAGTAATACATATGAGAGTTCATACAGGAGAAAAACCATACAAATGTGAACTATGTGGCAAAGCATTTTCACAACAAGGAAACCTTTTAAATCATCAAAAGATCCACACAAATCCACGAAGTTTTACATGTGAAGTTTGTGGAAAGAGTTTTAATCAAAAAGCTACTTTAAGAGATCACAGTTTATTACATTCTGGGGAGAAACCTTATGTGTGTACCATATGTGGAATGGCATTTACATTTAGTGCTGCCCTTCGTCGTCATTCATGGAGTCATAGTGAAGGAAAACCATTTGAATGTGATGTTTGCAATGCCAAATTTGTTGGAAGATATGATCTTAGACGTCATATGAAAATTCATAGTAAAAGGCCTAAATTGAAACgcaataaatcaaataataggAATAAAACAGAAGAGAATGTAATTGAAGTTCCTGAAGTTATTAATATAGTTCAAGAACCTTCAAATACAGATACTATTTTTGTTGAACAAATCTTTTTATGCGACGATGACGAATCAATCCAAATTATTTCACAAGGAGATTCTGAGAAGGAAAATGTTGATTCGTTGCTTGGGCTTATTCagtattcataa
Protein Sequence: MSWEISWGDLCRTCMDAEGNLISLYSNDDEDSENDLPQKLSELTSIEIDKYDGLPTKICNKCVNKTNMFFEFKYQVQESDKKLKEMFQEQMVCIVKMEQGEDVEYTLLETESENCNSVINEEDTSCQNINQNSFTKIDQTEEIDENTVATEQLNNACETVILNVNKDFNDVPDDSILSGVQNIHIIIQAEDLNTINGISESQFIENQSNDEGQNPETLSSKLGEIENQTEIAYNIQVSSEDINITDANESTFINPTSDDNNVPQDDSDSDDYMDSEQNIVGSINDTITKVKEIKEGGKIVQYQCTLCLQNYSVLAEALSHLVELHVPSGGPFYCVVCEMDCNSIKDLKAHVKIHKGPTPYNCFLCNKSYVMKRYLKRHMSCHLDFPRHRCAKCGERFKVKSDLDAHITSHSQEAAFKCSQCPRIFNHKGNYKRHLISHLDPQGLHLPKYPCNVCNRRFLNNRTLVIHMRVHTGEKPYKCELCGKAFSQQGNLLNHQKIHTNPRSFTCEVCGKSFNQKATLRDHSLLHSGEKPYVCTICGMAFTFSAALRRHSWSHSEGKPFECDVCNAKFVGRYDLRRHMKIHSKRPKLKRNKSNNRNKTEENVIEVPEVINIVQEPSNTDTIFVEQIFLCDDDESIQIISQGDSEKENVDSLLGLIQYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00691381; iTF_00693238; iTF_00690526;
90% Identity: iTF_00693238; iTF_00690526; iTF_00691381;
80% Identity: -