Basic Information

Gene Symbol
ZNF341
Assembly
GCA_030522745.1
Location
JAPYZB010002621.1:10507-13760[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.093 23 7.7 3.9 1 23 34 56 34 56 0.98
2 13 0.00029 0.073 15.6 3.9 1 23 215 237 215 237 0.99
3 13 3.3e-07 8.3e-05 24.8 0.4 1 23 243 265 243 265 0.98
4 13 0.016 4 10.1 1.3 1 23 290 313 290 313 0.96
5 13 0.044 11 8.7 0.2 1 23 319 343 319 343 0.98
6 13 5.9e-06 0.0015 20.9 1.4 1 23 348 370 348 370 0.98
7 13 0.007 1.8 11.2 3.9 1 23 382 406 382 406 0.91
8 13 0.00033 0.084 15.4 2.0 1 23 408 430 408 430 0.98
9 13 8.5e-06 0.0021 20.4 0.2 1 23 436 458 436 458 0.96
10 13 4.5e-05 0.011 18.1 1.2 1 23 464 486 464 486 0.95
11 13 0.002 0.51 12.9 1.2 2 23 493 519 492 519 0.89
12 13 0.072 18 8.0 8.2 1 23 525 548 525 548 0.93
13 13 0.0011 0.27 13.8 0.4 2 19 551 568 550 571 0.94

Sequence Information

Coding Sequence
GTATCATTAAATGGCTCGACAGTTCAATCTTTATTGGAATCTCAGACATTAATAAGTGAAGTCGAGCAATCAGCGATTGATCAAGATGAAGAAGACATATTTCAGTGTGGCAAATGCAAGAGCCAATTTACATCACTGCACTTATTTGTTCTTCATAAAAGGGAGCATACGAAGGTGCAGGAGCAGACGGTGGATTTAAGTCAGTATTTAGTCAACAGCGACAGTCATGTTGTTCAGACTGATGATAATTGTCAAGATGGCACACACTTTAATTCTGAGGATGATTTTAATCAGACACACCAGCTTGGGGAACCGATTATTTTGGAGGAAAATGATATACTTTTTAGCATGGACCAAGAAGGTGCTAGCTACTTAACTTCTAATTCAAGCTTTAACGTccctataattttaaatactgatGCATTGGATTCTTTTGCTGATTCTCCTATAACAGGAACTGATGATGATCCTATAACAGAACAAGTGAATGAATTGCATGTGTTGGAGAATGATATTAATCAGAATTTTGAAGAGAATGATCTACAGGAAGCAATCAATCTTTATGCTCCACAGGAAGAGACACCTGAGCACGTTGAGGGTTCAGAACCAGAAAATAAATCTGGTCAAACACAAAACCTAAAGTACAAGTGCAGCTACTGCCAGAAGCAATTTGCCAAAAAGTTTTACTGGCAGCAGCACGAACGCTCTCACACGGGAGAGAAACCGTACCAATGCGTGGTTTGCGGTCGGCCATTTGCCCAGAAATCTAACGTGAAGAAGCACATGTCTTCGCACAAAGTGTGGCCAGGAACGGCTATTCACTCGCTGCCGCCGGAAGCACCTGCGGACGGCAGCATTGAACGCTCCTATCACTGTCAATTCTGCAAGGAGATCTTCGACTCGTATAAGGCGCTCAAGGGCCACCTGATCGTCTCCCATCTGACCTTGAAAGTGTACAAATGCGTGCAGTACGGCTGCGGCTCTATGTTCGCAGAGCTCGAAGACTTCCTCGAGCATACTCGTAGCCACAAGCGTTCCGAATATCGCTGTCATGTGTGCGGCGAGACCTTTAACACCCTATCCGATCTCGGACTGCATCAGTACACGCATTCCGTCCAGAAGCAGAAAACTACCGAgaaGTACTATTGCTGTTCGGTATGCAAATCCTCATTTTCGAATCTTGAAGCGCTCCAGCACCACACAGAGACGACAACCCACGACTATGCCTGTCCACACTGCGGCAAGAGCTTCCTGATCGAACGTTTTCTAAGACGTCATCTTAAGACTCACGCTTCCTCAGCGCGTTTCGCCTGTGAGGACTGTGGCAAAGCCTTCAAGACTGAGCAGTACCTCGCCAATCACAAGCTTATTCACAGCGAGGAGACGCCCTTCCTCTGTCcaCACTGTCCAGCACGTTTCAAGAGGAAAGATCGGCTAGGCCGGCACATGCTCATCCACGATTTAACTAAGCGGCTCAAGTGCCCGTTTCGCGGACACCTCGGCTGCATGCGGGAATTCTCGCGGCCGGACAAGCTCAAACGCCACCTCCTCACCCACAGTAATCATAAGCGCTTTAGCTGCGGCCACTGCAACCGGCACTTCCATCGCGCCCAGGCGCTCAAGCACCATGAGCTACAGAAGCACAGCTTAAAGTGCGACATCTGCTCGCTTGCATTTAAAACCAAGGATCAGTTGTTAACTCATAATTGCGATCAGTCGGCTGAGCTTAAAAAACACACAAGCTCGCAGCTACCGAAAAAGGCTAGCGGCTCGTTCAAGCCTCGAAGGCCGACTCCTAAGCGGCAAGCCTCTTCTAAAGCCACGACTACTATTActtctactactactactattaCTACTTTAAGTACTTCTGATAAAGAGAAGGATAAGATTAAGGCTGATGAAATACAAAAACGGaATGTCTCAGAGACTTTAAAACTTGATCAACGAGAAGACGAATTCGACATAAAAATTGAGAGTATCAATCTTGATCTCGATTTGAACAACGAGAGTTCGCTATCTTTGGATTCTTTAAAAGACGAATAA
Protein Sequence
VSLNGSTVQSLLESQTLISEVEQSAIDQDEEDIFQCGKCKSQFTSLHLFVLHKREHTKVQEQTVDLSQYLVNSDSHVVQTDDNCQDGTHFNSEDDFNQTHQLGEPIILEENDILFSMDQEGASYLTSNSSFNVPIILNTDALDSFADSPITGTDDDPITEQVNELHVLENDINQNFEENDLQEAINLYAPQEETPEHVEGSEPENKSGQTQNLKYKCSYCQKQFAKKFYWQQHERSHTGEKPYQCVVCGRPFAQKSNVKKHMSSHKVWPGTAIHSLPPEAPADGSIERSYHCQFCKEIFDSYKALKGHLIVSHLTLKVYKCVQYGCGSMFAELEDFLEHTRSHKRSEYRCHVCGETFNTLSDLGLHQYTHSVQKQKTTEKYYCCSVCKSSFSNLEALQHHTETTTHDYACPHCGKSFLIERFLRRHLKTHASSARFACEDCGKAFKTEQYLANHKLIHSEETPFLCPHCPARFKRKDRLGRHMLIHDLTKRLKCPFRGHLGCMREFSRPDKLKRHLLTHSNHKRFSCGHCNRHFHRAQALKHHELQKHSLKCDICSLAFKTKDQLLTHNCDQSAELKKHTSSQLPKKASGSFKPRRPTPKRQASSKATTTITSTTTTITTLSTSDKEKDKIKADEIQKRNVSETLKLDQREDEFDIKIESINLDLDLNNESSLSLDSLKDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00691382;
90% Identity
iTF_00691382;
80% Identity
-