Basic Information

Insect: Eupelmus kiefferi
Gene Symbol: -
Assembly: GCA_030522745.1
Location: JAPYZB010014199.1:701-4027[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.01 2.5 10.7 1.1 1 23 264 286 264 286 0.95

2 12 7.9e-05 0.02 17.4 1.2 1 23 294 316 294 316 0.98

3 12 5.3e-05 0.013 17.9 0.6 2 23 324 345 323 345 0.96

4 12 0.00077 0.19 14.3 1.1 1 23 351 373 351 373 0.98

5 12 1.3e-05 0.0034 19.8 2.4 1 23 380 402 380 402 0.98

6 12 4.3e-05 0.011 18.2 1.6 1 23 408 430 408 430 0.95

7 12 1.5e-05 0.0037 19.7 0.1 1 23 436 458 436 458 0.98

8 12 8.2e-07 0.00021 23.6 1.2 1 23 464 487 464 487 0.96

9 12 4.3e-06 0.0011 21.3 0.5 1 23 493 516 493 516 0.96

10 12 6.6e-06 0.0017 20.8 2.8 1 23 522 544 522 544 0.99

11 12 0.00011 0.027 17.0 0.4 1 23 550 572 550 572 0.94

12 12 0.00033 0.084 15.4 0.1 1 23 578 602 578 602 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.01	2.5	10.7	1.1	1	23	264	286	264	286	0.95
2	12	7.9e-05	0.02	17.4	1.2	1	23	294	316	294	316	0.98
3	12	5.3e-05	0.013	17.9	0.6	2	23	324	345	323	345	0.96
4	12	0.00077	0.19	14.3	1.1	1	23	351	373	351	373	0.98
5	12	1.3e-05	0.0034	19.8	2.4	1	23	380	402	380	402	0.98
6	12	4.3e-05	0.011	18.2	1.6	1	23	408	430	408	430	0.95
7	12	1.5e-05	0.0037	19.7	0.1	1	23	436	458	436	458	0.98
8	12	8.2e-07	0.00021	23.6	1.2	1	23	464	487	464	487	0.96
9	12	4.3e-06	0.0011	21.3	0.5	1	23	493	516	493	516	0.96
10	12	6.6e-06	0.0017	20.8	2.8	1	23	522	544	522	544	0.99
11	12	0.00011	0.027	17.0	0.4	1	23	550	572	550	572	0.94
12	12	0.00033	0.084	15.4	0.1	1	23	578	602	578	602	0.94

Sequence Information

Coding Sequence: ATGACGGCGGATTCAGATAAAGACAGTACACATTGCTTACTTTGTAATAACAAAGTAGGAGTGTCAGTAAGGAACTCTATAAGCATTTTTGGAGATACTGCTGTAACAAACTCAGAGAAACCTATAATTGATGTAATTTGTTCTACTTTGCAAACGACTATCAAGAAAGAAAATGCACATTCatcaataatttgtaaaaagtgttACAAACTTGTTAATGaggCTGATGAATTAGAAAGTAAAttagaagatattaaaaaagaaatatgtaatttgtacaaaaaaactACAACAAAACTATCCGAAACAAATGTAAATGGAGATGAATATAATGATCACgattatattgataattcaGAAAATGTAGAGTTTGTAATCTTAGCTAAGAATACAGGAAAAGCTAAAGAAACtagaagtaaaacaaaaaaagtcacTATTTCTGAAGCACCTGTTCTAATTCAACCTGAAGAAATAGCCATAAGTCAAATTAAAACAGATGAAGATATAATAGATGATAACTCCGACGAACATGAAATTCAGGATGATCATATTGATAATGATAGTATTCATGATTCTGAAGAAATAAATGTACCTAAAAGTGAAATAgaagaaataattatagaaaagaaaaatacaaaaaaacaaaaaggaaaaagtgaTTCTCCAGATGAGataattgtgAAAGATGGTTCCAATTACATATGTGTCCTTTGCCCAGAAGAGAACAGGGAAAGTAAAGATGCCAAAGGTATAATTGCTCACCTGAAAGATGAACACGATGCTCGTGTATACATCTGCGATATTTGtggtgattattttaaaaaaagaactgaACTATCTCATCATTTAGATGATCATGTAGCAAAAGAGGAAGGCGATTTTCAGTGTGAAGTTTGTAATAGGATATTCAATAATTTACGATTATTCCGTATTCATAAACGTATTCATTACCCTCAAGTAAAGTCTTGGTCATGTGAGTCTTGTGGTAAACGCTACAGTTCAAAGAATTTGCTTGAAGAACACACTAATACCCACACTGGAAATAGACCATACATTTGTGAAGTGTGTGGTAAAGATTTTGCATCAAAGTATACCCATCGAGCACATGCTAAAACTCATGAAGTTCGGCCTAGGCCTTTCGAGTGTACTCAATGCAACAAAACTTTTCTTAGTCAACAGAATTTAACACAGCACATAAAAACACACAACGGAGTTAAAGAACATGTGTGTCATCAATGTGGAAAAGCATTTGGTTCTGCCCATAATTTAGAAGTTCATAATATTGTCCATACTGGATACAAACCATATATTTGTCGAGTTTGTGGTAAGGCTTTTGCTCGTAAGGCTGAGATCCGAGACCACGAAAGAACACATACAGGCGAGAAACCTTATCAATGTGAATTTTGTGGAGCTACATTCAGTCAAAGATCAAACTTACAATCACATAAACGTGCAACTCATTATAATGATAAAAGATATAAGTGCGATGATTGTGGCAAAGGTTTTAAAAGAAGAAGATTGTTAgattatcatattaaagcagctCACACTGGAGAGCGTCCTTACAAGTGCGAAACATGTACAGCAACATTTGTTTATCCAGAACATTTTAAGAAGCACATGCGAATACACACAGGAGAGAAACCTTATTTATGCGAGGTTTGTGGTAAAGCTTTTAATAGTAGAGATAATCGTAATGCGCATAGATTTATTCACAGTGATAAGAAGCCTTATGAATGTTTAGTTTGTGGAATGGGATTTATGCGTAAACCTCTACTTTACGCCCATATGCAAAcacagGGCCACTTAAATGACACCATTGTAGTTAATCAACCAAGACTAACTACTACTGAAGAAGATGTCATTATTCAAGACCCTTCCTCACGAGTTCATTTAGTTATGGAAGGTGGAGAAGaattaaatGAAAGTACCCAGCTTATTGTTGCAGAACTTAAAGATCATGTAATAATTCAAGATGGAGAACAGCAAAACGTTATTAGTCTTGCAGATGATCATTTAAGTACTGAAGAAGTTGATCAACTGCagATGTCTTTCGAGGAATCCGAAGTTATGGAATGTAAAACAGAAGAAACCgaaagcatcgaagaagtttACGGCTACCAGGACGAAGATGGCAACACTATTGTCCTGCCTGCAGGAACCGACATTAAAGAAATCATTGGGGAAGGAAATAAAACAATGCGATTGGTGCAAATTCGCTTGCCGGCGGGTACCGATGTCAATGGTCGAAGTTGGTTGAGCTTAGTACAAAACTAG
Protein Sequence: MTADSDKDSTHCLLCNNKVGVSVRNSISIFGDTAVTNSEKPIIDVICSTLQTTIKKENAHSSIICKKCYKLVNEADELESKLEDIKKEICNLYKKTTTKLSETNVNGDEYNDHDYIDNSENVEFVILAKNTGKAKETRSKTKKVTISEAPVLIQPEEIAISQIKTDEDIIDDNSDEHEIQDDHIDNDSIHDSEEINVPKSEIEEIIIEKKNTKKQKGKSDSPDEIIVKDGSNYICVLCPEENRESKDAKGIIAHLKDEHDARVYICDICGDYFKKRTELSHHLDDHVAKEEGDFQCEVCNRIFNNLRLFRIHKRIHYPQVKSWSCESCGKRYSSKNLLEEHTNTHTGNRPYICEVCGKDFASKYTHRAHAKTHEVRPRPFECTQCNKTFLSQQNLTQHIKTHNGVKEHVCHQCGKAFGSAHNLEVHNIVHTGYKPYICRVCGKAFARKAEIRDHERTHTGEKPYQCEFCGATFSQRSNLQSHKRATHYNDKRYKCDDCGKGFKRRRLLDYHIKAAHTGERPYKCETCTATFVYPEHFKKHMRIHTGEKPYLCEVCGKAFNSRDNRNAHRFIHSDKKPYECLVCGMGFMRKPLLYAHMQTQGHLNDTIVVNQPRLTTTEEDVIIQDPSSRVHLVMEGGEELNESTQLIVAELKDHVIIQDGEQQNVISLADDHLSTEEVDQLQMSFEESEVMECKTEETESIEEVYGYQDEDGNTIVLPAGTDIKEIIGEGNKTMRLVQIRLPAGTDVNGRSWLSLVQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00691364; iTF_00690514; iTF_00693223;
90% Identity: iTF_00690514;
80% Identity: -