Ekie005918.1
Basic Information
- Insect
- Eupelmus kiefferi
- Gene Symbol
- -
- Assembly
- GCA_030522745.1
- Location
- JAPYZB010003621.1:1-3757[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0019 0.48 13.0 0.1 1 21 56 76 56 77 0.95 2 13 2.6e-06 0.00065 22.0 0.6 1 23 157 180 157 180 0.96 3 13 0.0015 0.38 13.3 4.1 2 23 187 209 186 209 0.94 4 13 3.9e-05 0.0098 18.3 4.0 1 21 216 236 216 237 0.95 5 13 1.8e-08 4.4e-06 28.9 1.8 1 23 248 270 248 270 0.98 6 13 2.4e-05 0.006 19.0 0.5 2 23 280 301 279 301 0.97 7 13 0.053 13 8.5 0.7 2 23 308 329 307 329 0.96 8 13 1.7e-06 0.00044 22.6 2.5 1 23 335 357 335 357 0.99 9 13 2.1e-05 0.0052 19.2 2.6 1 23 363 385 363 385 0.95 10 13 2.3e-05 0.0057 19.1 1.4 1 23 391 414 391 414 0.94 11 13 2.2e-07 5.5e-05 25.4 1.0 1 23 420 442 420 442 0.98 12 13 4.5e-07 0.00011 24.4 3.6 1 23 448 470 448 470 0.98 13 13 8.7e-06 0.0022 20.4 0.9 2 23 477 499 476 499 0.95
Sequence Information
- Coding Sequence
- attcTGAAGGTGGAAAACACCTTTCTGCAGGAGGACGGTATGACCGAGGTTGTTGTTGCAGATCTCTTGGTGAAAGATCAAGAGGATAGGCTTATATTACCTGATATCATTGATGGAGAAGAAGtacttGTACAGAATGGCCAAATTATACAAATCATTGGTGATTACGAGTGTGTCACTTGTCACCGCATCTTTCCAAGTGAAGAGATGTTAAAAGAACATTTACAAGTATGTAGAGAAGAAGATGATGATGTCGATATTTTAGAATTAGGTGGAATGAATGATATAGATTCAGATGATGAAGAAAATGATGAATCTGTGGATGATCCAGATTATAACACAGATTCAAATCCATCAgattctcaaaattctcaaaataataataaaaaagtagcaaTTAAACCAGTGTCTGAAGATCAATGTCACTGTTGTGCTGAAGATTTAAAAACAGCTCATTCTGGTGGTCCTTTTAAGTGTTCCAACTGTGATATGTCATTTAGAAAGGCATCTTCTTTAGAAAGGCATACAATTGTGATTCATTGGGAATCAGATTCATGCACATGCAAAGAATGTGGCTCAACATTTCGAGATAAAAAAGCTCTTGATAAACATAAATACACAACCCATGTAAAAACTAAGAGGGTTTATAAATGCGATAAATGTGATACTTATTTTTCTAGAAGTTATCATTTAAATCGTCATAAACAGCAGTCAGGCTGTCATGGAGATACTGGCAATAGCTTCTCATGTCAGGTTTGCAACAAAGTATTCACTCGTAAAGATAATTTACGAGAACATTTAAGAACACATGCAGGAATGCCtcaaagaaagaagaaatcTTGCGACCTTTGtccaaaacaattttatacaaatCAACAATTAATAATTCACCAGCGAGTTCATACTGGAGAAAGACCTGTAGAATGTGATTTGTGTTCTAAAACATTCTTATCTACTTTGGCAATGAAAAAACATCGTAGAGTACACACTGGAGAAAAGCCTTTTGAATGTAAATATtgtcaaaaaaaatttgctgcCAGAGAAACATTAAATCGACATCAAAGAACTCATACTGGAGAAAAACCTCATATTTGTCAGTATTGTAATAAATCCTTTATTCAAGCAGCTCAGTTAAGAGCACACATATTTCACCATACAGGAGAAAATGGTTTTTATTGCGATGTGTGTGGAAAAGCTTTTAACCGAAAAGCGCGCCTTACTAATCACAAAAAGTTTGTTCATGAAGGTGCTACACCATTTAAGTGTGAAACTTGTGATAAGCCTTTTACAAGAAAAGAAGATTTATCCaaacatataaatttacatGCTGGAATTaaacctcATAAATGCGATACATGCGGGAAATGTTTTGCTGCAAAGTCATCATTACAAGCACACATGAATACTCACAGAAGAGAACCACCACAATCTTGTGCCGAATGTGGAAGAGCATTCATTCGTCAAGATTGCCTTATGCGACATATTCGCGCGAAGCATAGGGACCTATTAGAAGATGTACTTGGTGAAGCAGAGAAAAAACATTTACAATTACAAATGTTCAATATTGCTTACATTGCTGCCGAAAAAATGAAAACGGGCGAAACAAATATTCTTTCAACAAGTGATTTGATGAAAGTTATTACAGATCTTCTAGAAGTTCTTATAGAAAAAGAAACGTTAGAACTTTTTGGTTGGTTGCAATCACCTTTGCAAGATGTTCTTGAAGCTGTTATTCGAAGATGTGGGCATGAACCCCTTACAGCAGATAGTGATTTGCCACTACCAGAGAGGTTGAGAGGAAATGTTAAACTTCTATTTAACGCTGTTATTGAAGATGAAAATGTCAAATCTTTATTGACAACACAAACTGTTGATGAAGTAATTTTGCATGTTCTTAAATTATCAAAAGCTAACAAAGAAGAGAAAGAGTAA
- Protein Sequence
- ILKVENTFLQEDGMTEVVVADLLVKDQEDRLILPDIIDGEEVLVQNGQIIQIIGDYECVTCHRIFPSEEMLKEHLQVCREEDDDVDILELGGMNDIDSDDEENDESVDDPDYNTDSNPSDSQNSQNNNKKVAIKPVSEDQCHCCAEDLKTAHSGGPFKCSNCDMSFRKASSLERHTIVIHWESDSCTCKECGSTFRDKKALDKHKYTTHVKTKRVYKCDKCDTYFSRSYHLNRHKQQSGCHGDTGNSFSCQVCNKVFTRKDNLREHLRTHAGMPQRKKKSCDLCPKQFYTNQQLIIHQRVHTGERPVECDLCSKTFLSTLAMKKHRRVHTGEKPFECKYCQKKFAARETLNRHQRTHTGEKPHICQYCNKSFIQAAQLRAHIFHHTGENGFYCDVCGKAFNRKARLTNHKKFVHEGATPFKCETCDKPFTRKEDLSKHINLHAGIKPHKCDTCGKCFAAKSSLQAHMNTHRREPPQSCAECGRAFIRQDCLMRHIRAKHRDLLEDVLGEAEKKHLQLQMFNIAYIAAEKMKTGETNILSTSDLMKVITDLLEVLIEKETLELFGWLQSPLQDVLEAVIRRCGHEPLTADSDLPLPERLRGNVKLLFNAVIEDENVKSLLTTQTVDEVILHVLKLSKANKEEKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00691361;
- 90% Identity
- iTF_00691361;
- 80% Identity
- -