Basic Information

Insect: Eupelmus kiefferi
Gene Symbol: -
Assembly: GCA_030522745.1
Location: JAPYZB010019237.1:2273-5375[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.3e-05 0.0033 19.8 1.2 2 23 75 96 74 96 0.98

2 14 1.7e-05 0.0041 19.5 2.4 2 23 103 124 102 124 0.97

3 14 5.5e-07 0.00014 24.2 2.3 1 23 158 180 158 180 0.98

4 14 0.00064 0.16 14.5 0.1 1 19 186 204 186 208 0.95

5 14 3.5e-05 0.0089 18.5 1.1 2 23 215 236 214 236 0.96

6 14 1.7e-06 0.00042 22.6 0.8 1 23 242 264 242 264 0.95

7 14 1.8e-05 0.0045 19.4 0.2 1 23 270 292 270 292 0.98

8 14 2.2e-05 0.0055 19.1 7.2 1 23 298 320 298 320 0.97

9 14 2.3e-08 5.8e-06 28.5 0.6 1 23 325 347 325 347 0.97

10 14 0.00035 0.087 15.3 0.2 1 23 353 375 353 375 0.97

11 14 9.6e-05 0.024 17.1 7.0 1 23 381 403 381 403 0.97

12 14 1.1e-06 0.00027 23.2 1.1 1 23 409 431 409 431 0.99

13 14 1.4e-05 0.0035 19.7 0.5 1 23 437 459 437 459 0.98

14 14 0.0048 1.2 11.8 2.1 2 23 466 488 466 488 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.3e-05	0.0033	19.8	1.2	2	23	75	96	74	96	0.98
2	14	1.7e-05	0.0041	19.5	2.4	2	23	103	124	102	124	0.97
3	14	5.5e-07	0.00014	24.2	2.3	1	23	158	180	158	180	0.98
4	14	0.00064	0.16	14.5	0.1	1	19	186	204	186	208	0.95
5	14	3.5e-05	0.0089	18.5	1.1	2	23	215	236	214	236	0.96
6	14	1.7e-06	0.00042	22.6	0.8	1	23	242	264	242	264	0.95
7	14	1.8e-05	0.0045	19.4	0.2	1	23	270	292	270	292	0.98
8	14	2.2e-05	0.0055	19.1	7.2	1	23	298	320	298	320	0.97
9	14	2.3e-08	5.8e-06	28.5	0.6	1	23	325	347	325	347	0.97
10	14	0.00035	0.087	15.3	0.2	1	23	353	375	353	375	0.97
11	14	9.6e-05	0.024	17.1	7.0	1	23	381	403	381	403	0.97
12	14	1.1e-06	0.00027	23.2	1.1	1	23	409	431	409	431	0.99
13	14	1.4e-05	0.0035	19.7	0.5	1	23	437	459	437	459	0.98
14	14	0.0048	1.2	11.8	2.1	2	23	466	488	466	488	0.95

Sequence Information

Coding Sequence: gtaAAATTGGAATTTGATGCAGATAACAACCATCATCATTGGGCAGCTCAATTAGCAAATGCAAGTTTATTTGATAACGGAGATTATGGAGGTCAAAATGATCACTTTCTTAATTCAAGTGCAACACAAAAGTATTATAAGATTCAATGTATACTTTGTAAAAAATGGTTTTTGAATAATGATTCTATGGTGACTCACTTAAAAATGCATTGCTGTGGAAATACTTGTGAAGTTTGTCAACAAACTTTTACGGATAATACAGGTTTACATGCTCATATGTTAACGCACGTTGGTATGAGTCCTGTGGAATGTACAATATGTCAAAGAAGATTTGCTTACAAATGGTGTTTACGAAATCATATGCAAACGCATGTGCAAAATAAAACATATGAGTATGATAGTTTACAGCAAgtctttttaaaaagatatagtcAGAACAATGATTATTTAATGTGCAATGAAGAAAAGCCTTACACCTGCCACGTTTGCCAAATATCATTTAGAGAAAAAGGAAATTTAAATCGTCATATGTCAATGCATACtggagaaaaattttacagATGTGAAATTTGCTTCGCATCATTCCGGGATAAAGCAAAACTAAATATTCACGCTCCAATCCACACTGGTTTTAAGCATTTAAAATGTACTATGTGTTATCGATCGTTTAATCAAAAAACCGCTTTAAGTAACCACATGTTAGCACACAATGGGGAGAAACCCCATGCTTGTGACATTtgtgaaaaaacatataaaagaaaatctgaACTAATAAGGCATGCAATGATACATACAGGTGAAAGACCTTATGAATGTCCAGAATGTTTAATGACTTTTCGTGAAAAGGCTAAATTAAATTCTCATATGCTGGTTCATACAGGTGAAAAacctcatgaatgtcatatatGTCATAAAGCATGTGCTCGTAAGTCAGATCTGAATAGTCATATGCTCTCTCATACTGGAGGTCAGTATGACTGTAAAGtatgtgataaaatatttactcgaAAATCAGATTTAAATAGACATATTTTAGTTCATACTGGAGAAAAGCCGTATGCTTGTGATTACTGTGAAATGGCTTTTCGAGAAAAAACAAGACTGAACTCACATATGGTTGTGCATACAGGGGATAAAAGGCACATATGTCACatttgtcataaaaattttcGAGAAAAGTCAGTTTTACGAAAACATATGTTAAGTCATACTGGTGATCGGCCGTATGAATGTTATGTATGCCAAAAAGCATTTACACAAAAGACCACTCTTAATAGCCATATTCTAACACACACGACAGATGCATCATATGAATGTACTATTTGTCGAAAGGTTTATCGAGATAGACTGGCACTGAGGAAACATCTTATATCTCATAcaacagataaaaataatgaatgccctatttgcttaaaaaaatgcattcacAAAACGGCACTGAGTAATCATATAACATCAGCTCATTCGTTATAA
Protein Sequence: VKLEFDADNNHHHWAAQLANASLFDNGDYGGQNDHFLNSSATQKYYKIQCILCKKWFLNNDSMVTHLKMHCCGNTCEVCQQTFTDNTGLHAHMLTHVGMSPVECTICQRRFAYKWCLRNHMQTHVQNKTYEYDSLQQVFLKRYSQNNDYLMCNEEKPYTCHVCQISFREKGNLNRHMSMHTGEKFYRCEICFASFRDKAKLNIHAPIHTGFKHLKCTMCYRSFNQKTALSNHMLAHNGEKPHACDICEKTYKRKSELIRHAMIHTGERPYECPECLMTFREKAKLNSHMLVHTGEKPHECHICHKACARKSDLNSHMLSHTGGQYDCKVCDKIFTRKSDLNRHILVHTGEKPYACDYCEMAFREKTRLNSHMVVHTGDKRHICHICHKNFREKSVLRKHMLSHTGDRPYECYVCQKAFTQKTTLNSHILTHTTDASYECTICRKVYRDRLALRKHLISHTTDKNNECPICLKKCIHKTALSNHITSAHSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01469925;
90% Identity: iTF_00690507;
80% Identity: -