Basic Information

Gene Symbol
Csrnp2
Assembly
GCA_030522745.1
Location
JAPYZB010019810.1:515-2580[+]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.1e-79 1.2e-74 253.0 7.1 35 218 1 180 1 180 0.91
2 2 0.015 6.1e+02 2.2 2.0 50 86 185 221 181 246 0.43

Sequence Information

Coding Sequence
ATGAGCGCGACGCACACGCACGCCGAGCGTTTCTCGCTGACGGAACACGCCGCGGAGCAGCGCCGGCTCCACCGGGCGAGGCTGGCCCAGCTGCGCTCGGAGCGCGCCGCGGCCAACCTGAACGCGGCCGAGGCCGCCTCGAGCTCGGAGGACCCGAGCGACGACACCGACGACGAGCCGAGCGACAGCGCCGAGGAGCTCGACATCGACAGCTACTACTTCCTGCAGCCGGTGCCCACCTGGCAGAGGCGGGCTCTGCTCAGGGCGGCCGGAGTGCGTAGGATAGATGCTGTGGAGAAGGATGAGTGTAGGGATATCAGGGCGAGCAGGGAGCATTGCGGTTGTGGGTGTAAAGGATACTGCGATCCCGAGAGCTGTCCGTGTAGTAGAGCCAACGTCAAGTGTCAGGTCGACCGAGCTGGCTTCCCTTGCGGCTGCTCGCGGGACGGCTGCGCCAACAGTTCCGGCCGCATCGAGTTCAATCCCGTCCGCGTGCGCACACACTTCATCCACACTCTCATGCGGCTCGAGCTCGAAAAAAAGCCGGCCCACCaccaccagcagcagcaacagcagcgcgACGAGTCCGAGCACCAGCAGGAGTCGACGAGCGGCGCCGGCAGTCATCACCAGCATCATCATGCACAGGCCAACCATCACCACCATCATCAAAATCGACTCGCCGTGCCGCTGTCCTCGGTCCTGGACTCGGCCAACGACTGTCTCACAGGTGGCTTCACGAGCCTCCACTACGACAGTCAGGATGGCACGCGGCCCGACAGTCTCGATCTCTACACGATAAGGGATGACTGTTAA
Protein Sequence
MSATHTHAERFSLTEHAAEQRRLHRARLAQLRSERAAANLNAAEAASSSEDPSDDTDDEPSDSAEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCSRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKPAHHHQQQQQQRDESEHQQESTSGAGSHHQHHHAQANHHHHHQNRLAVPLSSVLDSANDCLTGGFTSLHYDSQDGTRPDSLDLYTIRDDC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-