Basic Information

Gene Symbol
Cdc5l
Assembly
GCA_030522745.1
Location
JAPYZB010079068.1:1-694[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.8e-13 2.2e-09 39.3 0.1 9 46 1 39 1 39 0.98
2 2 7.5e-10 2.5e-06 29.6 0.0 1 43 45 86 45 89 0.93

Sequence Information

Coding Sequence
GATGAAATTCTTAAAGCCGCAGTCATGAAATATGGCACAGAAAATTGGAATCGTGTATCTTCGCATTTGCCTACAAAGAATGCATCTTTATGCAAAAGCAGATGGTTCCAGTGGCTTGAACCAAGAATCAAGAAGACAGAATGGAGTAGAGAGGTAGaggaaaaattattgcatttagTTAAAATCATGCCTGCTCAGTGGAATACAATTGCTCCAATTGTAGGACGAACAGCAGTACAATGCTCAGAACACTATACATATTTGATTGATCAAACactaaaaaggaaagaaaatgaaaaactgGATGAACCTATAAGATTAAAACCTGGAGAATTGGATCCATATCCTGAATCTAGACCAGCCCGACCCGATCCTGTAGACATGGATGAAAATGAACTGGAAATGTTAGCAGCAGCTAGAGCAAGATTAGCTAACACACAAGGTAAAAAGGCCAAAAGAAAAGCACAAAAAAGATGTTTAGAAGAAGCTCATAGGCTtgcaattttacaaaaacaaagaGAGCTGATAAAAGCTGGTATTTCAGATgtacagataaaaaaaagataa
Protein Sequence
DEILKAAVMKYGTENWNRVSSHLPTKNASLCKSRWFQWLEPRIKKTEWSREVEEKLLHLVKIMPAQWNTIAPIVGRTAVQCSEHYTYLIDQTLKRKENEKLDEPIRLKPGELDPYPESRPARPDPVDMDENELEMLAAARARLANTQGKKAKRKAQKRCLEEAHRLAILQKQRELIKAGISDVQIKKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00692850;
90% Identity
iTF_00692850; iTF_00691870;
80% Identity
-