Ekie011191.2
Basic Information
- Insect
- Eupelmus kiefferi
- Gene Symbol
- -
- Assembly
- GCA_030522745.1
- Location
- JAPYZB010008114.1:2172-2678[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-10 1.3e-06 30.0 0.0 3 38 32 67 30 70 0.92 2 2 3.5 9.2e+03 -1.5 0.1 34 44 138 148 134 149 0.78
Sequence Information
- Coding Sequence
- ATGTGCTGTGAAGGGGaagtcaagaaaaataaaaaaactaatggCCACCGTACTGACACAAAGAAGAATAGTTTGGAGAAAAACTATACAGTTGAATCGTTGCAAGCTGCTCTAAACGCAATGGGCGAGGGAGCGACTCTACGCCAAGCTGCTCACAATTTCGGAGTGCCCAAGAGTACACTTTATCTCAAATCCAAGAACGTAGTACCACTCGAGTGTAGAACGGGACCAAGTACTATCTTGAGTGCAGAGGAAGAGAGTGAGATTGTGTCATGGATAATCTTTTGTGCAGACAGTGGTCATCCTATTACTAAATCAAGACTCCTTGACTGTgttcaaaaatatcttggtaATAGAACTGATACTCCATTCGAAAATAATCGCCCTGGCCAACACTGGTACCGTGCTTTTATGAAGAGATACCGCAATCATTATGCTAGTTCTCAAAGACAACAAAGTAATTACGGAGAAAGGTGCCAGGGCTCCTTATCAAATAGTATCAAGTAA
- Protein Sequence
- MCCEGEVKKNKKTNGHRTDTKKNSLEKNYTVESLQAALNAMGEGATLRQAAHNFGVPKSTLYLKSKNVVPLECRTGPSTILSAEEESEIVSWIIFCADSGHPITKSRLLDCVQKYLGNRTDTPFENNRPGQHWYRAFMKRYRNHYASSQRQQSNYGERCQGSLSNSIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -