Ekie003090.1
Basic Information
- Insect
- Eupelmus kiefferi
- Gene Symbol
- -
- Assembly
- GCA_030522745.1
- Location
- JAPYZB010001539.1:13136-28336[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-10 2.3e-06 29.2 0.1 5 38 1 33 1 35 0.93 2 2 1.2 3.2e+03 -0.0 0.0 14 31 1056 1072 1045 1078 0.71
Sequence Information
- Coding Sequence
- ATGAAGGCAGCGCTGACGGCTCTGAATCAAGGCATGTCCTTCAGAAAGGCTGCTGAGAAATTCGGCATCACCAAATCGACGCTTCAGCGCATCAAGTCCCAGCAGCGTTGGAACGCCGGTGatattattatcattgattCAGATGAAGAAGATGAAAGCTTGAAAGGTTTTCCTGGAAATAGAGAGGCCGGCGTCTTTATAAAACAAGAACCAATTGAACATTTTCAAGACCGGGGAATCGAAGAAATAATAGTTAAGCAAGAGTACAATGATGATAAATATGAAACTCaaggaatttttattaatccagAAAACATTAAAGATGAAATGGAAAAAGATGTTTTTGCCGAGGAGGACTTCGAATGCACGTCTCCCGAGTTATCAGCGTCAGCAGAAAATTTTAGTGTTGACTCGCTTCCACACAAATCTCAAAAAGTATACTGGACTGTGTATGATGCTTTTATAGAATGGAAgaacactaataaaattaacgataTCACAGGAGATGTTATGTTGGCTTATTTCGATGTTATTCTGATTGAATCTGATGAAGAAGATGAGATCAGGAATAGTTTTACTGGAGATGAAGAACAAGAATCGTGTCTTCCCATAAAACAAGAACCGACTGAAGATATTCAAGATTTTAGAATTGAAGAAGTTACGATTAAGGATGAATTTGTAGCTGATGAAATATCATTAAACAGTGATGATATTGAAAAAGACATTATCGTTGAGGGTGATTTTGATTATACATCGCAGGAAGCCTACAGAACCGAAGATAACTATAGTGGCTACGaagcaaaaaaatcaaaagtattaacaccagatgaaataaaaaaatttttgtacgaAGCGCCGGATGAACTTTACTTAGCTACTAaggTTGCTTTGATTTTTGGTATATACGGAGCGTGTCGACATGGTGAACTAGTTAAACTCACTGTTAATGAAGTCATAGATTACggtgaaattatgaaaattatattaagagaTCCAGATAGTAAGACTTCAAGAGAATTTTACATTGAGGGTGAACCAGTTCGATTAGTTAAAGCTTATCAAGCATTGCGTCCTCAAAATGTAACTGTTGATCGATTTTTTTTGGCATACAGAAAGAATAAGTGTCTTAATCAGCCTCTTGGGAAAAATCGTTTTGGTACAATGCCCAGAGAAATAGCACAATATCTTAAACTACCAAATCCAGAGATGTATATTGGCATTTCGAGAATAATCAGCAACGTTGCTTatgtACTTCTCATAGACTTAGATGAAGAACATAACAGAAGAGGGGCGCAAATACAAGAACCAAATGAACATCTTCAATTACGTCGAATCGAAGAAATTACACTTAAGCAAGAATTTACAGAAGACGCTGATGCTGATGATATGTTGTTACATAGTGATGATATTGAAAAAGATGTTTTAGCCGAAGACGATTTCGATTATACTTCGTCGGAGATGTATAAAACCACCGATAATGTTAAAAAGTCCAAAGTATTAACATCAGAtgaaatacaaaagtttttatacgAAGCTCCAGATTGTGTTTACTTAGCTACAAAGGTTGCTTTGATTTTTGGTATATACGGAGCGTGTCGACATGGCGAACTAGTTAAACTCACCGTTAATGACGTCATAGATTACggtgaaattatgaaaattataataaaagattccGAACATAAGACTTCAAGAGAATTTTATATTGAGGGTGAACCACTTCAACTTGTTAAAACTTACCGATCACTGCGTCCAGAAAATGCGACTATAGATCGATTCTTTTTGACATTTAGAAAGAATAAATGCCATAATCAACCTCTTGGAAAAAATCGATTTGGGACGATGCCCAAAGAAATAGCTCAATATCTTAAATTACCAAAACCAGAGATGTATACTGGAATTTCGAAGATAATCAGTAATGTTTCCTCTGGATCAAGGTATAATTCTAATTCTAAAATACTAAGCTTATTTACgaatattattatcattgattCAGATGAAGAAGATGTAAGCTTGAAAGGTTTTCCTGGAAATAGAGAGGCCGGCGTCTTTATAAAGCAAGAACCCATTGAGCATACTAAAACAAGTGGAATCGAAGAAATTACACTTAAGCAAGAATTTTCTGAAGAACCTGATGCTGATGGTATGTTCGTACATAGTGATGATATTGAAAAAGATGTTTTGGCCGATGACGATTTTGAGTATACATCGTCGGAGATGTATAAAACCACCGATAATGCTAAAAAGTCCAAAGTATTGACATCAGAtgaaatacaaaagtttttatacgAAGCTCCAGATTGTGTTTACTTAGCTACAAAGGTTGCTTTGATTTTTGGTATATACGGAGCGTGTCGACGTGGGGAACTAGTTAAACTGACTGTTAATGAAGTCATAGATTATgATgtcatttttattgaatcagATGAAGAAGATGTAATCAGAAAAAGTATTTCTGGAAATAAGCGAAGCGAGCCGTGTTTCATTATAAAGCAAGAACCCATTGAGCATACTGAAACAAGTGGAATCGAAGAAGTTATAATTAAGCAGGAGATCACTcaagataaatttgaaattgaagaaGTCATGATAAAAAGTGAGAATATCAAAGATGAAATCGAAATGGATGTAATTGTTAAAGAGGAACTTGAAACAGATCTGAATAAGTGTGAAAAAGCTTCTACGAGTAAGCAGAAAGATGCTGTtgaagatgaagatgaagaCGACGAAGACGATGATGAAGATTTCGAAGAAGAAGGTTTTAGTGATCTAGAATATATATTAGAACAAGAGGAAAATAAAGATAACGTTGAAGAAGAATACCAAAAAGATGACGATAAAGATGAAGaactttttgtaaatcaaagtacaaaacaagaaaaaaaatcaagtattaaaattaataataaaaatctaaaagatGCAAAAGAGGAAATAAAAGTAGCTTTAGGaaCACCCGAAAAGATAAAGTATAAAGTGATTATACCTCAAGAGCGAAAGAGCCTCGATACATTCGAGGGTTGGTGTACGCGTAACGTAGCCAGACAGGACAGAGAACCCCCGTATTCGTTTGTCCATAACCCGAGAAAAAATCCTACTATGGTCCCTTACAGCGTTCCATATCGAATGACAGCGAATCTTCGAATGGCACTGATGGCGCTGGATAAGGGCACAAGTTTTGATGTTGTCTCAAAGGCCTATGGTATCCCTGAGCAGAGGCTACGCAGGATTAAGTTTATGGAGGAGCAAAATCCCGAACTGATTTCGCATCCACATCCCAACGTTTACACCAGGCCATATCAGCGGTCCACGTCAGCCAAGAAATTTCGCTGCCCCATTTGCGGCCGAAGCTACAAAGTTCAGCGCTCGCTACGACGACATATACAGATCGAGTGTGGGAAGGCACCCAGGCACAAGTGTCCGTATTGCGACCACCAAACCAAGTACAGGGCCAGTGTGCTCAAACACATCATGCACATACATCCCAATCTGCCGCTCATCACGTAA
- Protein Sequence
- MKAALTALNQGMSFRKAAEKFGITKSTLQRIKSQQRWNAGDIIIIDSDEEDESLKGFPGNREAGVFIKQEPIEHFQDRGIEEIIVKQEYNDDKYETQGIFINPENIKDEMEKDVFAEEDFECTSPELSASAENFSVDSLPHKSQKVYWTVYDAFIEWKNTNKINDITGDVMLAYFDVILIESDEEDEIRNSFTGDEEQESCLPIKQEPTEDIQDFRIEEVTIKDEFVADEISLNSDDIEKDIIVEGDFDYTSQEAYRTEDNYSGYEAKKSKVLTPDEIKKFLYEAPDELYLATKVALIFGIYGACRHGELVKLTVNEVIDYGEIMKIILRDPDSKTSREFYIEGEPVRLVKAYQALRPQNVTVDRFFLAYRKNKCLNQPLGKNRFGTMPREIAQYLKLPNPEMYIGISRIISNVAYVLLIDLDEEHNRRGAQIQEPNEHLQLRRIEEITLKQEFTEDADADDMLLHSDDIEKDVLAEDDFDYTSSEMYKTTDNVKKSKVLTSDEIQKFLYEAPDCVYLATKVALIFGIYGACRHGELVKLTVNDVIDYGEIMKIIIKDSEHKTSREFYIEGEPLQLVKTYRSLRPENATIDRFFLTFRKNKCHNQPLGKNRFGTMPKEIAQYLKLPKPEMYTGISKIISNVSSGSRYNSNSKILSLFTNIIIIDSDEEDVSLKGFPGNREAGVFIKQEPIEHTKTSGIEEITLKQEFSEEPDADGMFVHSDDIEKDVLADDDFEYTSSEMYKTTDNAKKSKVLTSDEIQKFLYEAPDCVYLATKVALIFGIYGACRRGELVKLTVNEVIDYDVIFIESDEEDVIRKSISGNKRSEPCFIIKQEPIEHTETSGIEEVIIKQEITQDKFEIEEVMIKSENIKDEIEMDVIVKEELETDLNKCEKASTSKQKDAVEDEDEDDEDDDEDFEEEGFSDLEYILEQEENKDNVEEEYQKDDDKDEELFVNQSTKQEKKSSIKINNKNLKDAKEEIKVALGTPEKIKYKVIIPQERKSLDTFEGWCTRNVARQDREPPYSFVHNPRKNPTMVPYSVPYRMTANLRMALMALDKGTSFDVVSKAYGIPEQRLRRIKFMEEQNPELISHPHPNVYTRPYQRSTSAKKFRCPICGRSYKVQRSLRRHIQIECGKAPRHKCPYCDHQTKYRASVLKHIMHIHPNLPLIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00692567;
- 90% Identity
- -
- 80% Identity
- -