Ekie009538.1
Basic Information
- Insect
- Eupelmus kiefferi
- Gene Symbol
- lov
- Assembly
- GCA_030522745.1
- Location
- JAPYZB010006586.1:3246-5619[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.5e-06 0.012 17.4 0.0 1 37 213 249 213 256 0.88 2 4 4.8e-11 1.3e-07 33.3 0.0 8 39 270 300 264 304 0.92 3 4 5.7e-05 0.15 13.9 0.0 6 34 320 347 317 352 0.91 4 4 2.1e-10 5.6e-07 31.2 0.0 4 37 378 411 375 416 0.93
Sequence Information
- Coding Sequence
- ATGTCAGAGTCCTCGCCAACGAGCCAGCAGGCGGACACGTCCTACTGCTTCAAATGGAGCAACTACCAGGGTCACCTCTCCGAGGTCGTGCGCCAGCTCCTCGACGAGGAGTGCATGGTCGACGTGACGCTTTACACGCAGGGCGAGCGCATCCAAGCGCACCGGCTTGTTCTCTGTGCCTGCAGCACTCTTTTTCAGgaaATTCTCAGCCAGGTTAATGATGAACATCCAACAATCATTCTGAGCGATATATCACCACAAGATGTAAGGTCAATTGTAGAGTTTAGTTACAACGGAGAAGTTAGAATACCTGTTGAAaacatcaataatttattagatgCAGCACATTCTTTGAAAATATGCGGTTTGATGGAAATCGAAGGACTTGATGAAACTGAAATACCAAATGATAAGGATGAGATTGAAGAAACATATATACTTAACGAAGTACCACCAAGTAGTAGTAATGATGATTATCTGGATTTCGATGAAAAATCCAGTCGTGAAAAATTTATAgagtcaaaaagaaaaagaaagaaagattcAGATGATgatgattttgattttataagtcccattagaaaaaataatggcAAGATGAAAAGGCAAAGAAAAAGTGTGTGTAAAAAAGAATACACAGATGAAATGTTTAATCAAGCTAttgaagatataaaaaatggaaaatcacTATTAGAGGCTGCTGCTCAGAATCAAATTCCTAGATCTACACTTTATATGCGTGCAAAATTATTGGGAGTACATTTGAATCCTATTAGAAATGAATATACTTATGAAGATGTGAAAGGAGCTATAGAAGCAGTATGCgATGGTGCTAGTTTGCAGCAAGCAGCAGATTGTTATGGAATTCCAAAAACAGTCTTGTGGAGGAGAATACAAAAAGCAGGTATTACAACTCCTAGACgtgaaacaagaaaaaattatgcCTGTGAAAAGAGAGAAGCTGCTGTAAAAGCATTAGCGAAAGGAGAGTCTCTCACAAAAGTTGCAAATGAATACCAGattccAAAAACAACGTTATTCCGAGATAAAGTAAAATTGGTAGATCAAGGAAAATTACCAGGATCATTTTGGAAAAAGCGTAAAACTGATActgaagaggaaaaaaaatctcGTCTAGAAGAAGCTGTATCAGCATGCAAAGATGGTAAAATGTCTCAAGCAttagcatcttcaacttatcAAGTACCTAAAACAACAATATGGAGACGTCTTCATCaagatgagaaaaaaatagttCCATCACCACTTCCcaagaaaaaagaatcaaaagttATTGAATCGCCTATTAAAGCAAAAACGGTGGATGTAAAAGCGGAAGAGTTGAATGAAGCCGATTTTGAAGCTTATTGCCCAGATGAATCAGAAATGAGTATAACATATATTGATGAAAGTAATATGACAGACGATCCAGTTATAATTTTGGCTAGTGGAGATGTAGACAATCTAAATTTACCAAATAGACCTTTAGTAGTTGTACAGAATGATGGTAATGATGAGAATTTTATTTCCTGTGGACTGGAAGAATTAGATGAAAATTCAGCATTTGAATCAAAGAGTTAA
- Protein Sequence
- MSESSPTSQQADTSYCFKWSNYQGHLSEVVRQLLDEECMVDVTLYTQGERIQAHRLVLCACSTLFQEILSQVNDEHPTIILSDISPQDVRSIVEFSYNGEVRIPVENINNLLDAAHSLKICGLMEIEGLDETEIPNDKDEIEETYILNEVPPSSSNDDYLDFDEKSSREKFIESKRKRKKDSDDDDFDFISPIRKNNGKMKRQRKSVCKKEYTDEMFNQAIEDIKNGKSLLEAAAQNQIPRSTLYMRAKLLGVHLNPIRNEYTYEDVKGAIEAVCDGASLQQAADCYGIPKTVLWRRIQKAGITTPRRETRKNYACEKREAAVKALAKGESLTKVANEYQIPKTTLFRDKVKLVDQGKLPGSFWKKRKTDTEEEKKSRLEEAVSACKDGKMSQALASSTYQVPKTTIWRRLHQDEKKIVPSPLPKKKESKVIESPIKAKTVDVKAEELNEADFEAYCPDESEMSITYIDESNMTDDPVIILASGDVDNLNLPNRPLVVVQNDGNDENFISCGLEELDENSAFESKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00693104;
- 90% Identity
- iTF_00693104;
- 80% Identity
- iTF_00692165;