Basic Information

Gene Symbol
ct
Assembly
GCA_030522745.1
Location
JAPYZB010003549.1:6380-10102[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-32 2.8e-28 99.8 0.0 3 77 223 298 221 300 0.96
2 2 8.4e-31 1.1e-26 94.7 0.0 3 75 461 534 459 538 0.95

Sequence Information

Coding Sequence
ATGTTTCCGCACTTTTTCAGCGGACAGAACCTGCAGGGCATGGAGCGCACGCAGGAGGAGATCCGCATGGCCCTGGACGCCTACCACCGCGAGCTCCAGAAGCTGAACGTCGCCCAGGGTCTACCCTACCCACCTCAGATCTCGGGCCTCCTGGCCCTCCAGCAGCACGCCATCCAGCAGCACCACCTGGCGACGAACGGCGGTGGCGCCGGCGCGGGTGCCGGCTCCGCAGCCGCCGCGGCCGCGGCAGCCGCAGCTGCAGCGGCGGCCCAGGACCTCAGCCTCGGCAACATCCTCAGGAACAAGATGATCAACGGCGTGTCCGAGGAGGAGAAGGAAAAAATGGAGGAGGCCATGAGGCACGCGGGCAGCGCCTTCTCCCTGGTAAAGCCAAAGCAGGAGCCAGGCGTAACCGGTGGCAGCGGCGCCCAGTCGACGCCCGGTGGCTCCAGCGCCAGCTCGCCCCTCGGCAACTCGATCCTGCCCCCGGCGATGACGCCCAGCGAGGAGTTCGCCGGCGCCGCGGCCGCCAGTCCGCTTCAGCGCATGGCCTCCATCACCAACAGTCTCATCAGTCAACCGTCCACGCCGACCCACCACTCGGCCAATCAGCGGCCGCTCAAGGCCGTGCTGCCGCCCATCACCCAGCAACAGTTCGACATCTACAACAACCTCAACACCGAGGACATCGTCAAGAGGGTGAAGGAGCAGCTGTCCCAGTACTCGATCTCGCAGCGCCTGTTCGGCGAATCCGTCCTGGGCCTGTCCCAGGGCTCCGTGTCGGATCTCCTGGCTCGGCCCAAGCCCTGGCACATGCTCACGCAAAAGGGCCGAGAGCCGTTTATACGCATGAAAATGTTCCTCGAGGACGACAACGCGGTGCACAAGCTCGTGGCGAGCCAGTACAAGATAGCGCCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCGTGCGGCACGCCGATGAAGCCGATGCCACCGACCAAGCTGGTGCAGGAGCAGCTGCAGAACGCCGCCAAGGCCCAGGCCGCCGCCCAGGCGGCTGCCCAGGCCGCAGCGGCCGCCCAGCATCAGCAGGAGAGCCACATGCAGCTCGGGCCGCCCCAGCAGAGTCCGCAGCACCCGGCGCTGCCACAGAGCTCGCCGATGATGCTGACACCTCCAGGACCCATCCTGCCGCACAGCCAGATCAGCATGCAGGAGCTCCagaaaaagcagcagcagcaacagcagcaacaacagcagcaccAGGGACCCCCGATGAACCTGCACTCGCCGCACCAGATGGCGCAGTCGCCCATGCGCGCCCTCCACCCCCACATCTCGCCGAGCGTCTACGAGATGGCAGCCCTCACTCAGGATCTCGACACCCAGACCATCACGACCAAGATCAAGGAGGCTCTGCTGGCCAACAACATCGGCCAGAAGATCTTCGGCGAGGCGGTGCTGGGTCTGAGCCAGGGCTCCGTAAGCGAGCTTCTCAGCAAGCCCAAACCGTGGCACATGCTCAGCATCAAGGGACGCGAGCCGTTCATTCGCATGCAGCTCTGGCTGTCGGACGCGCACAACGTCGACCGGCTCCAGGCGCTGAAGAACGAGCGCCGCGAGGCCAACAAGAAGCGGCGCAGCAGCGGCCCCGGCCACGACAACAGCTCCGACACGTCGAGCAACGACACCGCCGAGTTCTACCACGCGGCGTCGCCCGGGCCCGGGCCCACCTCCGCCAAAAAGCAGCGCGTCCTCTTCAGCGAGGAGCAGAAGGAGGCGCTGCGGCTGGCGTTCGCTCTGGACCCCTACCCGAACGTCGCGACGATCGAGTTCCTCGCGAGCGAGCTGGCCCTCTCCTCGAGGACGATAACCAACTGGTTCCACAACCACCGCATGAGACTGAAGCAGCAGCCGCCGCACGGCCAGCCGGAGCCGCAATCGCCCCGCGAGCCCGGCCAGCCGTTCGACCCCGTGCAGTTCCGGCTGCTCCTCAACCAAAGACTGCTCGACATCCAGAAGGAGAGACTCGGCCTGGGCAGCGTGCCCCTCACCTATCCGCCCTACTTCAACCCGAACCTCGCCGCCCTCGTCGGCAACGCGCTCAAGGAGCAGTGCTCCGGCCTCGACCTGTCCATGGGCTCGCTCAAGCGGGAGCCCAACCAGGAGTTCGAGGACGAGGACGCCGAGGACGCGATGAGCAACCTCGGCAGCGAGGACTCCGAGGGCTCGGCTACCAGCGTGAAGCGCGAGCCGACGGAGACCCCGGTGCCGGCCAACACCTCGAGGTCGAACCGGCGGAAGCCCGCGGCGCCCCAGTGGGTTAACCCGGAGTGGCAGGAGCCAGCGAGGACCGGCGACGAGGTCATCATCAACGGCGTCTGCGTCATGCAAACCGACGACTACGGCGTGAAGCGAGAGGCCGAGGAGACGGTGAGGGTGGAGCCGACGCCGGTTCAGGACAGATACGAGGAGGACGCCCAGAGCGACGTGTCCTCGGCCGCCTCGGCGAGCAACGCCCCGGACCGCGAGAGCCCCTCGCCCAGTCCAAAGTCGGCCCAGAACAGCCCGGCGGCCTCGCCCAGGCCGCCCTCGGCGCCACAGCCGGCCGAGGACAGTCCCAAGGACGTGGTGAAGCACGAGCCCGAGGAGACGTGGGACTATTGA
Protein Sequence
MFPHFFSGQNLQGMERTQEEIRMALDAYHRELQKLNVAQGLPYPPQISGLLALQQHAIQQHHLATNGGGAGAGAGSAAAAAAAAAAAAAAQDLSLGNILRNKMINGVSEEEKEKMEEAMRHAGSAFSLVKPKQEPGVTGGSGAQSTPGGSSASSPLGNSILPPAMTPSEEFAGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDIYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAAAQHQQESHMQLGPPQQSPQHPALPQSSPMMLTPPGPILPHSQISMQELQKKQQQQQQQQQQHQGPPMNLHSPHQMAQSPMRALHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKKRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELALSSRTITNWFHNHRMRLKQQPPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLDIQKERLGLGSVPLTYPPYFNPNLAALVGNALKEQCSGLDLSMGSLKREPNQEFEDEDAEDAMSNLGSEDSEGSATSVKREPTETPVPANTSRSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKREAEETVRVEPTPVQDRYEEDAQSDVSSAASASNAPDRESPSPSPKSAQNSPAASPRPPSAPQPAEDSPKDVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01428152;
90% Identity
iTF_01218878;
80% Identity
iTF_00691801;