Basic Information

Gene Symbol
Kdm5
Assembly
GCA_030522745.1
Location
JAPYZB010000200.1:1-6987[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.5e-26 1.1e-21 79.0 0.0 2 89 127 210 126 210 0.94

Sequence Information

Coding Sequence
ATGGTCTCGAAGCCGCAGCCAGGCGGCGGCAGATACCAGTGCGCCAGCGGCGCAGGGGACATCGGCAACAACACTGCCAGGCGGCAGGCCTTGCTCCAGGAGTGCGCGGCCGCCAGCAGCACGAGCGGCATGCCAGCACAGCGCGAGGACTTTGAGTTCCTGGTGCCGCCCGAGGCGCCAGTCTTCGAGCCGACCACCGAGGAGTTTCTAGACCCGCTGGGGTATATAGCCAAGATCAGGCCGATCGCCGAGAAGTCCGGCATCTGCAAGATCAAACCGCCACCCaACTGGCAACCACCGTTTGCTGTGGATGtagataaattcaaatttactcCAAGAATACAAAGGCTAAATGAACTTGAAGCAAAAACTAGGATTAAGCTTAATTTCTTGGATCAAATAGCAAAATTTTGGGAACTTCAAGGATCCTctttaaaaattccattagttgAACGTAAAGCGTTGGATCTATATTCACTCCACAGAATTGTGACAGATGAAGGTGGAATAGAAACTGTTACAAAAGAAAGGAGGTGGGCGAAAATAGCAAATAAGTTAGGCTACCCTTCTGGGCGCAGTGTTGGCAGTATTCTTAAGAGTCATTACGAAAGAATTTTATACCCATTTGACGTCTTTAAACAAGGAAAAACTTTAActgatattaaaattgaacCGGATAGTGATGCGAATGAGAAGAAGGATAGAGACTATAAACCACACGGAATTATATCGCGACAACAAATCAAACCACCACAAGAGAAATTTTCGCGGCGTTCTAAGCGATTTTCAGGGCAAGATGAGAAACAAAATGGATGTCAATCAATTAAACAAGAAGACTGTAAGGAGGAGTTTGATATCGATACCAaggttaatattaaaaaagaatgttttgaTACCAAGCCCAATGTTAGAGGTAAAAATGTTGACTGCAAGGATAATGTTAATGTTAaagGCAAAAACTCCCATGACACCAAGGACTGTATTAAAACGAGAGGTGCAGCAGCTGAAAAAGATAAAGAGAACAgtaaagaacttaaaaaattgcagTTCTATGGAGCTGGACCCAAAATGGCTGGCTATAATACCAAAGAAACGAAACAACCGAAATCAAATAAAACGAGAGGGGTCAAGCTAGTCTATGAATTCGATCCActtGCTAAATACATTTGTCATAATTGTGGCAAAGGAGATAATGAAGAAAACATGTTACTTTGTGATGGATGTGATGATAGCTATCATACATTCTGTTTGTTACCACCATTGACAGAAATCCCTAAAGGAGACTGGCGATGTCCCAAATGTGTTGCTGAAGAAGTATCAAAACCAATGGAAGCCTTTGGATTTGAGCAAGCACAAAGAGAATACACGTTACAACAGTTTGGAGAAATGGCAGATCAGTTTAAAAGTGACTACTTTAACATGCCCGTCCATatggtACCAACTGAGTTAGTAGAAAAGGAGTTTTGGAGAATAGTATCATCCATCGATGAAGATGTTACTGTTGAATACGGAGCTGACTTACACACAATGGATCATGGATCTGGCTTTCCGACAAAAACAAGTGTCAATCTTTTTACCTGTGACCAAGAATATGCAGAGTCTTCCTGGAACTTGAACAATTTACCAGTATTGCGAGAGAGCGTTCTTGGACATATAAACGCTGACATCAGTGGAATGAAAGTCCCGTGGATGTATGTAGGAATGTGCTTTGCGACCTTCTGTTGGCACAATGAAGACCATTGGAGctattctattaattatttacattgggGTGAACCAAAAACGTGGTACGGTGTACCGGGATATGAAgctgaaaagtttgaaaaatctatGAAGTCTGCTGCACCAGAGCTTTTTCATAGTCAGCCAGATTTGCTTCATCAATTAGTAACCATAATGAATCCTAATATTCTTACCAGTGAGGGTGTACCAGTATATAGAACAGACCAGCATGCTGGCGAGTTTGTGGTTACATTTCCTCGAGCCTATCACGCAGGTTTCAATCAGGGCTACAATTTTGCTGAAGCTGTAAACTTTGCTCCTGCAGATTGGttgCAGATAGGCAGAGAATGTATTACACACTACTCGAATCTCAGACGGTTTTGTGTTTTTTCTCATGATGAATTAGTTTGCAAAATGTCTTTGGAGCCAGAAACTCTGGACATTGGAATTGCTGCTGCAACATATCATGACATGTTGACTATGGTTGAGGAAGAGAAGAAATTGAGGAAAAACCTGCTAGAATGG
Protein Sequence
MVSKPQPGGGRYQCASGAGDIGNNTARRQALLQECAAASSTSGMPAQREDFEFLVPPEAPVFEPTTEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTDEGGIETVTKERRWAKIANKLGYPSGRSVGSILKSHYERILYPFDVFKQGKTLTDIKIEPDSDANEKKDRDYKPHGIISRQQIKPPQEKFSRRSKRFSGQDEKQNGCQSIKQEDCKEEFDIDTKVNIKKECFDTKPNVRGKNVDCKDNVNVKGKNSHDTKDCIKTRGAAAEKDKENSKELKKLQFYGAGPKMAGYNTKETKQPKSNKTRGVKLVYEFDPLAKYICHNCGKGDNEENMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTELVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRESVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGYEAEKFEKSMKSAAPELFHSQPDLLHQLVTIMNPNILTSEGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLQIGRECITHYSNLRRFCVFSHDELVCKMSLEPETLDIGIAAATYHDMLTMVEEEKKLRKNLLEW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00969358;
90% Identity
iTF_00969358;
80% Identity
-