Basic Information

Gene Symbol
Arid4b
Assembly
GCA_030522745.1
Location
JAPYZB010007444.1:2541-6989[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.2e-29 8.1e-25 89.1 0.2 1 89 312 399 312 399 0.95

Sequence Information

Coding Sequence
ATGTCTTGTAATGTTTTGCAGGGGGACGATCCGCCTTACCTTTCGGTGGGCACCGAGGTCAGTGCCAAGTATAAAGGTGCCTTCTGCGAGGCTAAGATCAGGAAAGTTGTGCGCAGCGTCAAGTGTAGAGTGACTTACAAGCAGGGTCTGGGCACGGCCACTGTTACCGATGACCAGATCAAAGGGACACTGAGAGTGGGTGCTTCGGTAGAGGCCAGGCacaatgataaaaaagaatttgtcGAGGCTACTATCACCAAAATACAAGACTGCAGTCAGTATACTGTTGTGTTTGATGACGGTGACATTACTACCCTTAGGAGAACTGCTCTGTGTCTAAAGAGTGGCAGGCACTTTGCTGAAAGTGAAACGTTAGATCAGCTACCTCTGACCCACCCAGAACACTTTGGAAACCCTGTTATTGGAGGAAGACGTGGCAGAAGGTCCAGACAAACTCAagaTGACAGCAGCGATGAAGATGATGATGGCCCAAGAGGTAGTAATGATTCTGGATCTGGATCTGGTGGTAAAGAGGGACCAGAAACGGAACCAGAAATTGGTAGGGTGGTTTGTGTGGAGCTTggtgacaaaaagaaaaaagacaactGGTTCCCTGGGTTAGTTGTTGCTCCAACTGCCCAAGATACCGTGAGAATTAGAGTTCGTGATGACTATCTAGTGAGATCTTTCAAGGATGCTCGataTTATACAGTACCGAAAAAAGAGGCCACTGAATTTACCAAAGATTTGGTCAATAAAGTGGAGAACAGTGCTTTGAAAGTAGCAGTGGAAAAAGCTTTACTATTTTTAGAGAAGAATGAGTTGCCTCCTCATTGGGATCGAGATTCGTTGTTTGGAAACTCGGTATCAAGCGGAAATAGCGACTCTGATGGAGAACTTGACTCagatagtTCGGACGATGAACCTCGAGAAGAAAAGGATCACTTCGTCGCGCAATTGTATAAATTCATGGACGATCGAGGAACCCCAATTAATAACTGTCCTATGATCGGTAACGAGGACATCGATCTGTACAGGTTATTCCGCGCTGTCTACAAACTTGGTGGCTATAATCGTGTTACCAATCAAAATCAATGGAAGCTGATTACAAGGCGACTAAGTTTTTCCATGCAAAACAATACGTCGACGCACAATTTAGTTAAACAAGCTTACAAAAAATTCCTGCACTCCTTCGAAGATTTCTACAGAAAACTTGGTTGCACAATGGTAAATCATCCAAGAGGTAGTATTAGAAAACAGCGACCTGGTCGTAGTTTAATTCGAGATAAGGACCGAAATACACCAGTGCCAACTCAGGATAAGGCtgcaataaaacaagaaaaggaagatgaagagaaagaaaaaaagaacatcaATGTTGTCGAAGATGAGATTAAGAAGGAGAAGCGTGAGATTAAAAAGGAACCACCTGTAATAAAGGAAGAAGAGgtgAAGGTGAAGAGAAAAGAAGAACCAGCGGAAGAAAGCGCGAGTGGGCAAGAAAGCGATGTAAACATCGAGGTTGAAGAGGAGTCTTCCTGCAGTGAGAAATCGCAAAAGAGTTCAAGACTGACTCCTTCGAGCAATGTTAGTAGTAAATCCAAAACGACGACAGCAACAGCTGCTGtcaaaagtaaagaagaagTGCCGAAGAAAAAAGCAACCCAAGAGAAGAAAAAACCCGATACAAAGAAACAAGATAAAAAGGATGACAAAGGCAAGGAAGATGATAGTACGAAGACAAGGTCTAAATCCAAAGAAGATGTAGCTAAAGGAGTAAAGTCAAATTCTGCTTCAGATGCTAGGGAAACGAGAACACCTTCAAGAGAATCGGATAAAAAGGGTCTTGGAAAACAAAGAAGAATGACTGAGGAGGAGCTGAAAAAACGAGGTAGAAAGAAAAAGGAAGTTGAAGGCGAGAAAGGAAAGGGCTCTGAAGATCGATCAGTCGAGTATGCACCTAGCTATAAAGGACCCGTTGAAATTGGAGATAGACTTAAGGTGTACTACGGACCAACTCATGAGTCCAAAGTTACTTATGAGGCTAAAGTTATAGATATGGAAAAAGACGGAACTGAAGCCGTGTACTTAGTTCATTACACTGGATGGAACACCAGGTATGATGAATGGATAAAGGGATCAAGAATCGCACAAAACTTCACTCAAGCTCAAGGTCGAGTCAAGCGCACCAAAGCTACTCCACGGCCGCAAACTCCTAGCTCCTCTGCAAAGTCTTCCAAAGGGACGACGGCTCCGAACGCTGGAACTGGTGCAGCGTCCTCGGCCAGTGCTCAGAGTCGCCGCCGGGCCCAAAGTGATGCACCTTCGAGCTCTTCAAACGCCAAAGACTCGCGTAAAGAAGATCGCGAAGGTACACCAGCAAATCGTTCAACAACTCCTTCACCTCTCACTTCAAGCATTCTTCGAACAAAGAGCCCTGCTACAACGGCAAACAACAGGCCTACGCGGATGACAAGAAATGCTGATTCTACGTCGGTCAATGATTTAGGCAGGCGGACAAGAAGAACCTCAGGGCACGCAGATGCCATGGCCGCTGAAGAGTCGGAAAGTGAAGATTCAGATTCGCTTGAATCAGACGCCAGCGTTGAACCCGAACAGGTACAATCAAGATCGCGTATGAAGAGCGGTATGCAGGAAAGAAATCGCAGGGAGGCGAGACGGCGAGCTGAAAGTCGTATGAAAATTGAAGAAACGAGCGATGCAGAAGCTGAGAAGGAAACAGAGGAGCCGCGCAGAGGGCGTAGACTGAGAAAAGCTATTGGAAAGTTGCAGGAAGTAAAGTCTGAACCAGAAAGTGAGGAAGAGCAGCCCAAAGGTAGAGATTTTGACCTGAATCAAATTAGATCTGAACTTAAGGGTTTTGATAAGGCTGTGAAGTTGGAAATAGCTAGTGTCGAACCAGAACctgaagaagaagaggaagaacaGCCTTCTATACCAATTAAACAAGAAAAGATTGAACCTGAGAGCGTCGTAGATAAAAagTTACAAACTGAAAATAAGAACTTTCTGGTATGA
Protein Sequence
MSCNVLQGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVTDDQIKGTLRVGASVEARHNDKKEFVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQTQDDSSDEDDDGPRGSNDSGSGSGGKEGPETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKDLVNKVENSALKVAVEKALLFLEKNELPPHWDRDSLFGNSVSSGNSDSDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGNEDIDLYRLFRAVYKLGGYNRVTNQNQWKLITRRLSFSMQNNTSTHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGSIRKQRPGRSLIRDKDRNTPVPTQDKAAIKQEKEDEEKEKKNINVVEDEIKKEKREIKKEPPVIKEEEVKVKRKEEPAEESASGQESDVNIEVEEESSCSEKSQKSSRLTPSSNVSSKSKTTTATAAVKSKEEVPKKKATQEKKKPDTKKQDKKDDKGKEDDSTKTRSKSKEDVAKGVKSNSASDARETRTPSRESDKKGLGKQRRMTEEELKKRGRKKKEVEGEKGKGSEDRSVEYAPSYKGPVEIGDRLKVYYGPTHESKVTYEAKVIDMEKDGTEAVYLVHYTGWNTRYDEWIKGSRIAQNFTQAQGRVKRTKATPRPQTPSSSAKSSKGTTAPNAGTGAASSASAQSRRRAQSDAPSSSSNAKDSRKEDREGTPANRSTTPSPLTSSILRTKSPATTANNRPTRMTRNADSTSVNDLGRRTRRTSGHADAMAAEESESEDSDSLESDASVEPEQVQSRSRMKSGMQERNRREARRRAESRMKIEETSDAEAEKETEEPRRGRRLRKAIGKLQEVKSEPESEEEQPKGRDFDLNQIRSELKGFDKAVKLEIASVEPEPEEEEEEQPSIPIKQEKIEPESVVDKKLQTENKNFLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-