Basic Information

Gene Symbol
pnr
Assembly
GCA_030522685.1
Location
JAPYZA010003632.1:9642-21062[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6 1.6e+04 -2.7 0.1 7 12 171 176 161 178 0.56
2 2 1.3e-15 1.3e-11 45.6 4.4 1 35 394 427 394 428 0.98

Sequence Information

Coding Sequence
ATGCTGCACATTCCCAGTTGCATCATTACTCGGAAGAGAGAGGACATTCTCGTTCAGTCAGCCAAGGAGAGCAGTGAGTTTAACATATTGCAATCGGTGCTGAAGCTAAGCAGAATGCTATCGAGCAACGGCGAGCCAGTCTCGTCCGCCAGCATGAACCTGAACCTCCAGCCGGCCGCCATGCTAACTCATCCCCGCGAGCGTCCACCCACGTTCCAGATGTTGGTGCCGCTACGCGGCGACGAGCCGAGCCTCGAGGATGACACCTGCTCCAACGACTCGGACCCCGACAGATTGGAGATCGAGGAGCTCGAGGAGGAACAGCGCCAGCAGGACGACGACGGGAGCGGCAGCGAGGCCGGCGGCGCGGCTGAGAACGGCCACGACATGAGCATGGGCAGCAGCGCCAAGAGGCCGAAGAAAGAGCCGAACGGGCCGACTAGCGCGGAGAGCCCGATCAACAGGATGGACACGCCGGAGAGTAACTGCTCCGACAGCCAGGTCGACCAGGAGACGACCAAGCTATGGCAGGCGCTCGCTAGcaaCCGAAACCTGGAGATAACGCGGACGAACGGCGAAAAACCAAACAACGGTTTCAGCGGCGAGGCGACGAACTTGCTTCGCTCTCTTATGAACAACCGGCCGGTCGGCATAAGCGTCATTGAAGCGGCTGCGGCCGCAGCTACGGCTGCAGCGGTGGCGGCCAACAATAACCAGGGCTCGAGATCGCCAGGACCACAGATTCGATTTTCCAGTAATAGTAGCCAGGGCACCGGATTGTTGCCTAATCTCATTGCCTCGACAGACTGCCCAGTGCTCGGCAATCGAACTAACCTGGTGGCGCGCATCGACCCGACGaaTGCATCAATGGACAGCAATCCGTCGAGCCCAGCGAGCGGCGGCCAGCCCCTACGCAAAGAGTCGAAAGGTAGGCGAAAGCAAAGCTTCCCAGTCAAAGCACCCGCAAGTCCTTATCAGCGTGCAGATATGGAGGATCAGGCTCAGGACTTCACAGCCTGGtccaaaaaaatcaaagaaaagCTGCAAGAGGAGCAAAAGTACAATCCAGCTGACCAGTCGATTGGTGGTGGCGGCGGAATCGTCGTAGGCGGCGGAGGTGCTAACAACAACGTGGCCAGCAACAACGGCAACAACTCCGTAAAGAAAGTCGACATAACCTGCACCAACTGCGGCACCATGACCACGACGATCTGGAGGCGAAGCTTAAAGGGCGAGATGGTTTGCAACGCCTGCGGTCTCTATTACAAGCTGCACGGTGTTAACCGGCCTCACACCATGCGCCGAGACACGATACACACACGGCGGCGCAGGCCCAAGGGCGAGAAAGCAACCAGGCATCGAAAAAAAGCCGACGGTGGTTCGACACCTCAACAGCGGGTACAACAACAAAGAGAGCAGCAGCCAGCTAACGAGCCGATGGATGCGGAAAGCGCCGACATGCTCGCGGCGCTGCGCCGCCAGATTCAGCCACACCTGATGATGGCGGCATTGGCGTCGCCTGCCGGCCGAGTCCTCCCTTTGGGACAGGCTCATCCCGCGCCCCTCGTACCAAGCCCACCCATCCCGGGCCCACCACCCATCAACTTCGGCATTCCCCTCTCCAACTTTATGATGAAGCACATAAAGGAGGAAGAATGCTCTGACGGCGGCGACGAAGAAAACGTCTCAGAAATGCCGCTGAACCTCGTCGCCACATCGCTCGCCGAAGAGGCTCACTGA
Protein Sequence
MLHIPSCIITRKREDILVQSAKESSEFNILQSVLKLSRMLSSNGEPVSSASMNLNLQPAAMLTHPRERPPTFQMLVPLRGDEPSLEDDTCSNDSDPDRLEIEELEEEQRQQDDDGSGSEAGGAAENGHDMSMGSSAKRPKKEPNGPTSAESPINRMDTPESNCSDSQVDQETTKLWQALASNRNLEITRTNGEKPNNGFSGEATNLLRSLMNNRPVGISVIEAAAAAATAAAVAANNNQGSRSPGPQIRFSSNSSQGTGLLPNLIASTDCPVLGNRTNLVARIDPTNASMDSNPSSPASGGQPLRKESKGRRKQSFPVKAPASPYQRADMEDQAQDFTAWSKKIKEKLQEEQKYNPADQSIGGGGGIVVGGGGANNNVASNNGNNSVKKVDITCTNCGTMTTTIWRRSLKGEMVCNACGLYYKLHGVNRPHTMRRDTIHTRRRRPKGEKATRHRKKADGGSTPQQRVQQQREQQPANEPMDAESADMLAALRRQIQPHLMMAALASPAGRVLPLGQAHPAPLVPSPPIPGPPPINFGIPLSNFMMKHIKEEECSDGGDEENVSEMPLNLVATSLAEEAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00693458;
90% Identity
-
80% Identity
-