Basic Information

Gene Symbol
pnr
Assembly
GCA_030522685.1
Location
JAPYZA010009142.1:6314-8334[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2e-19 2.1e-15 57.7 6.2 1 35 18 51 18 52 0.98

Sequence Information

Coding Sequence
ATGGGACAGATCTCCGAATTCCAGACGGCGACGAGGCGGCTCGGGCTCTGCTGCACGAACTGCGGCACGCGCACCACGACCCTCTGGAGGCGCAATAACGAGGGTGAACCGGTTTGCAATGCATGCGGCCTCTACTTCAAGCTGCACGGCGTCAATCGGCCACTGGCAATGCGCAAGGACGGCATACAGACGCGCAAGCGAAAGCCCAAGAAGACACCCGAGCCGAACGCCAGGCAGTCGGCGAACGACCACGATAACAATACGTCCACCGCTTCTTCGCCTGCGAACGAACTGAAAAGCAGCCACCACCAGTCGCACCAACCGCAGCCCCAGCCGCACCAGCCTCACCCGCAGCACCAGCTCGACGGCAAATCCACCTCGGCACCGAACTCAAACACGTCGTCCGGCTCGGAGCGTCCGGTCTACCTCGGCCACACGTCGCTGCTCTCGTCGAGCGGCGACGCAAGCTCCGCCGTCATACCCACGGTGAAGACGGAGCCGCGCAGCTGCGACGGCGGCGTCATCGGGCAGCCCTACTCCGCCTACTACCAGCACCATCCCCATCAGCTGGGCGTGCCCGCGAGCGAGCACCAGCAGGCCAACTACTACGCCAGCAGTCAGGAGGCGCCCTATCACCATCAGCATCACGTAACCGCAGCCGCCAAGCTGCTCGCCTCGTCCTAA
Protein Sequence
MGQISEFQTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPNARQSANDHDNNTSTASSPANELKSSHHQSHQPQPQPHQPHPQHQLDGKSTSAPNSNTSSGSERPVYLGHTSLLSSSGDASSAVIPTVKTEPRSCDGGVIGQPYSAYYQHHPHQLGVPASEHQQANYYASSQEAPYHHQHHVTAAAKLLASS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00739597;
90% Identity
iTF_00692588; iTF_00690773;
80% Identity
-