Basic Information

Gene Symbol
gata4_1
Assembly
GCA_030522685.1
Location
JAPYZA010003535.1:9781-23308[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-17 1.9e-13 51.4 3.2 1 34 195 227 195 229 0.97
2 2 2.3e-19 2.4e-15 57.6 5.7 1 34 249 281 249 283 0.98

Sequence Information

Coding Sequence
ATGGTTACGGTGATTCTGGAGGGGGCGTTTGGGAGTTCATCCTTGTACCGAATGGCCGGCGTAGGCAGTCTCGGATCCAGCACCGGATCCAGCACTGGCTACCCCATGTACATGAACCCAGCCGAGCTTACACCCACTTCCCAGCAGCTCTGGACATCTCAAGTTCCAACCGTCAGCGGCACCCTGCCACCAATGTCGGAGGACTACTCGGACAAGGCACCCACAGCCAGCCACCAGAGCCTCCCAGCCTTCACCCCGCCATTTGGCGCTCGCTTCCGCTACTCGCCGCCCTACACCAGCAACCCCCAGGCCGTCGCCGCGTCGAGCGCCGCCCTGGCCTCGGCCGCCGACGTCGCCTGCTGGTCCAGCTACGTGACGAGCGGTGAGTCCTACGCGGCCGCCGCGGCCGCCGCAACTAGTAGGGTGGCCGATGTCAAACATCGGCCGCTTAATAATAGGATCAATGTGTCGACGGCTGGGGGCACCGGGGCGATCAGCCAGGCCCAGCATCAGCTCAGCGCGGCCGCCAATTTGACAGCCAtgcaCAACATCGAAGCTGAGTACTTTACGGAGGGTCGTGAGTGCGTGAATTGCGGGGCGGTATCCACTCCGCTCTGGCGACGGGACGGCACCGGCCATTACCTCTGCAACGCCTGCGGCCTTTACCACAAGATGAACGGCATGAATCGGCCATTGGTTAAGCAATCCAAGCGAATGTCGGCAACCAAGCGAGCCGGCCTGTCCTGCAGCAACTGCCACACGACGACGACGTCGCTGTGGCGTCGCAACGAGCACGGCGACGCCGTCTGCAACGCCTGCGGCCTCTACTACAAGCTTCACCGCATTAACAGGCCGCCCTCGATGAAGAAGGAGGCGATACAGACGCGCAAACGCAAGCCTAAGAATGTTAAAGTCAGCGACACGCCCATAAGTGGTCCCTGTCCCCTTCCGCtgaacaataacaataataacaacatcaacaacaataataatacgATGAAGATCGAGCTCGATTACCACAACGATCTACGCTCGAGCCACGCCGGCGTCACTCAAACCACCTACGCCACAAACCTGTACGCCGGCCAGCCTCAGTCCAGGGTCTACCGGCCAGAGAACATCTACTACGACATCTTCCAGCAACaggcccagcagcagcagcaacagcagcagcagcagaaccACCCGATGGACAACCATCACTCGCCCAAGGTAGAATGCCCATCGCCGCCGTGCGCCACCCGCTCGCCCGTCCTGGTATCGGCCGGCCACTCACCGGACcaccagcaacagcagcaacaccAGATCGCCGCCTCGTCGCCGCACATCGTCAGCCTGAGCAACTCGTCGCCGGGACCGAGCGCCAAGCTCCTCATGGACAACATCGACCGGCCAACTGTCGTCTCGATATCCTCGtag
Protein Sequence
MVTVILEGAFGSSSLYRMAGVGSLGSSTGSSTGYPMYMNPAELTPTSQQLWTSQVPTVSGTLPPMSEDYSDKAPTASHQSLPAFTPPFGARFRYSPPYTSNPQAVAASSAALASAADVACWSSYVTSGESYAAAAAAATSRVADVKHRPLNNRINVSTAGGTGAISQAQHQLSAAANLTAMHNIEAEYFTEGRECVNCGAVSTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQSKRMSATKRAGLSCSNCHTTTTSLWRRNEHGDAVCNACGLYYKLHRINRPPSMKKEAIQTRKRKPKNVKVSDTPISGPCPLPLNNNNNNNINNNNNTMKIELDYHNDLRSSHAGVTQTTYATNLYAGQPQSRVYRPENIYYDIFQQQAQQQQQQQQQQNHPMDNHHSPKVECPSPPCATRSPVLVSAGHSPDHQQQQQHQIAASSPHIVSLSNSSPGPSAKLLMDNIDRPTVVSISS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00690774;
90% Identity
iTF_00690774;
80% Identity
-