Eazu007365.1
Basic Information
- Insect
- Eupelmus azureus
- Gene Symbol
- -
- Assembly
- GCA_030522685.1
- Location
- JAPYZA010003929.1:11122-14179[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.0014 0.29 13.4 1.1 2 23 57 78 56 78 0.96 2 16 1.1e-05 0.0023 20.0 3.0 2 23 125 146 124 146 0.97 3 16 1.3e-05 0.0027 19.8 3.9 1 23 151 173 151 173 0.96 4 16 0.00043 0.089 15.0 0.8 1 21 180 200 180 204 0.92 5 16 0.0019 0.4 12.9 5.2 1 23 295 317 295 317 0.97 6 16 4.7e-06 0.00097 21.2 2.2 1 23 364 386 364 386 0.98 7 16 0.00061 0.13 14.5 0.7 1 20 391 410 391 412 0.94 8 16 0.043 9 8.7 0.3 2 23 423 444 423 444 0.97 9 16 1e-05 0.0022 20.1 0.7 2 23 482 503 481 503 0.97 10 16 2e-05 0.0042 19.2 1.5 1 23 508 530 508 530 0.95 11 16 3.9e-05 0.0081 18.3 1.9 1 23 536 558 536 558 0.98 12 16 7.9e-06 0.0016 20.5 1.5 1 23 575 597 575 597 0.95 13 16 3e-07 6.4e-05 24.9 0.6 1 23 603 625 603 625 0.99 14 16 3.3e-05 0.0069 18.5 0.2 1 23 631 653 631 653 0.97 15 16 0.00012 0.026 16.7 4.1 1 23 659 681 659 681 0.96 16 16 0.01 2.1 10.7 0.5 1 20 687 706 687 708 0.89
Sequence Information
- Coding Sequence
- ATGAAAGAAGATCCCATGCCACTGGAAGTTTCTTTCCATGAAGATGATGATGAACTAGATTTCCATGGCTATGATAATTCCACTGCTGAAACGGATTATGATATTGAAGATGATGAGattgaaacagataaaaaaattcatgtgaaAAAGGAATTAGAAAGTTTGTTACAGTGTAATATCTGTTCAGAAGAGTTTGATACAATGGATAAGCTAAAAAATCATAAGTCTAAGCATGTTGTTGAAGGTTCACTAATTAAGCAAGATTTAAATGATGATGAACTACTAAATAATTCAGCTTGCAGAACAGATAGTGATGAAGAAGCTAACATAAAGGACTTTAATACTACtaaaaaagaagagttcaaagaTCTCAAATGCCCACACTGTCCAATGTCATATTCCCACAGAAAGTCTCTTGCACGTCATATGGAAAGCCACTCTGGCACAAAGTACAGTTGCAAACTCTGTTCACAAAGTTTCTCTAGGAAAGATCACTTACGTCGGCATGTAGATCAACATACGAGCCgattaaaaagctttaaatgtACACAGTGTAATAAGAGCTTTGGCAATGAACTGACTTTGAGAAACCATTTGATAGCAACAAATCACAAAACTACTGTGAGAGGACAGGAATATGATCCAAATAAAAGGATCAAGAGGGTAGCTGCTAAGGctgcacaaaaaattattgacCAAATCAAAACAGACCTTATGGATGATGAGGAAGAAGAGAAAGTGCCAAGATTAAGGGACagggatagagatagagataaaataaaagataacgCGGACGTCAAAGAAGAAATTAATGATTCAATGGAGAAACAAAAgGAAAATACGGCACAGGTATCTAAGAAATTGCAGCGTAGTTCCAAATCTTTCATTTGTGAAACCTGTCATACAAAATGTTCTTCGAAACAAGCTCTTACGAAACACATGGAGCAGCACGTGAAGGatgaaaatacaattaatcaagaaaaaatggataaaacGCTCGAGGAAAGTCGAGAGACGGAGGAGAATGAGGAagacaacgacgacgacgatgattATTTCGAAGGCGGTCTCGACTGGCCAATTGATAGTTACGAATGTCCCACTTGTAAAAAACGTTATAGTACCAAAAAGTCCTTGTTGCGCCATCAACTATTGCACGAGGAACCTAATTTTGAATGCGATATTTGCAGcgtgaaattttatagaaaagaCAAACTTAAAGCTCATTATGATAAATGTTCAGAAAAGAATCCAGACCAAGTACGAAAGTGTAATATTTGTGGTGATACATTTGAGAAcaatgaaattttgagagaGCATCGAGCGAAGCACGTTACGGAAGGAATTTTGACAGAAGAGGATCTAAGAGAAATAGAGCCAAGACCTGAGGATAAGAATGAGGAGAAGCAACCGCGGAAGAGACGTACGGATATCGTAGGTCTTGAATGTACTGAGTGCAACAAACGATATACCTCTAGAAAAGGATTATTAAGACATATACAGGTACACGAAGGGAAAAAGTACTTGTGTGAAATATGTCCAAAGAAGTTTTACAGGCGAGAACATCTAAAGATTCATGTAGCCAAACACAACATGATCAAGCCTTACAAATGTCCTCGTTGTACAAAGCGTTTTATCAAGGAGGAGCAGCTGAACAATCACTTGACGAAACATGAAAGAACATTCAAGAAGGCCAAAGAGTCCTCTGACACGGCAAAGAGATTCCTCTGCGAGATCTGTTCAAAGTGTTTCACACAGTCGACGACGCTGATAGCTCATCTGCGTGCTCATAACGGTATCAAGCCCTACGTTTGTGAGGTCTGTTCGAGACCTTTTACAACGAATGCGTACCTGAAGATGCACATGCGAACGCACACTCAAGAGCGGCCCTACATCTGTCAGTACTGCTCCAGGGCTTTTGCGCGAGCCGACACCCTGGCTAACCACTTGACCTCGCACACCGGTGAGGCTAAATATCACTGCAAGTACTGCCCTAAGAACTTCAGAAGACTCAAGTCTCTCAAAGAACACGTCTTTATACACACAGGACAGCGTCCCTACGCTTGTCCTACTTGTGACCGGAAGTTCAATAACAACGGCAGTAGGTATGCTCATAGCAAGCGCTGCAAACAGAATTTGCAAGCTAGGCCTCAGCAAAATTTGCAGGTAAGACCTCAGCAGCAGCTTCCAACTGTTCACAATTTCGGGCCGATCGATACACAGGAGCTGCAGGAACAGCAGGAACAAGAAGAGCAGGAGCAGCAGTTACAGCTGCAGGAGCACCAAGAGATTCAGCAGCAATTGCAACAACAGCAGAGGATACACCAGGCCACCATTGGTCAGGCACAAATTATCAAACCACAAAACATCAAGACCATCACCATTACCAGGCAGGATCCGGGCCTGGGACAGCAGCACGTCATGGCCCATCAGGAGATTTTGATGCCTCTGATATTGCCATTAACGGTGACTTTGACCGATGTGGGTGAGGAGGTGATTCTTCCTGAGGGAACCAAGATTTTCACCACGTAA
- Protein Sequence
- MKEDPMPLEVSFHEDDDELDFHGYDNSTAETDYDIEDDEIETDKKIHVKKELESLLQCNICSEEFDTMDKLKNHKSKHVVEGSLIKQDLNDDELLNNSACRTDSDEEANIKDFNTTKKEEFKDLKCPHCPMSYSHRKSLARHMESHSGTKYSCKLCSQSFSRKDHLRRHVDQHTSRLKSFKCTQCNKSFGNELTLRNHLIATNHKTTVRGQEYDPNKRIKRVAAKAAQKIIDQIKTDLMDDEEEEKVPRLRDRDRDRDKIKDNADVKEEINDSMEKQKENTAQVSKKLQRSSKSFICETCHTKCSSKQALTKHMEQHVKDENTINQEKMDKTLEESRETEENEEDNDDDDDYFEGGLDWPIDSYECPTCKKRYSTKKSLLRHQLLHEEPNFECDICSVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDTFENNEILREHRAKHVTEGILTEEDLREIEPRPEDKNEEKQPRKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCEICPKKFYRREHLKIHVAKHNMIKPYKCPRCTKRFIKEEQLNNHLTKHERTFKKAKESSDTAKRFLCEICSKCFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRKFNNNGSRYAHSKRCKQNLQARPQQNLQVRPQQQLPTVHNFGPIDTQELQEQQEQEEQEQQLQLQEHQEIQQQLQQQQRIHQATIGQAQIIKPQNIKTITITRQDPGLGQQHVMAHQEILMPLILPLTVTLTDVGEEVILPEGTKIFTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00692317;
- 90% Identity
- iTF_00692317;
- 80% Identity
- -