Eazu001589.1
Basic Information
- Insect
- Eupelmus azureus
- Gene Symbol
- -
- Assembly
- GCA_030522685.1
- Location
- JAPYZA010000569.1:15184-18798[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.01 2.2 10.6 3.7 1 23 44 66 44 66 0.96 2 22 6e-06 0.0013 20.8 2.7 1 23 72 94 72 94 0.98 3 22 1.3e-07 2.7e-05 26.0 0.1 1 23 100 122 100 122 0.99 4 22 0.0017 0.36 13.1 1.5 3 23 130 151 129 151 0.97 5 22 0.00018 0.038 16.2 5.9 1 23 156 178 156 178 0.97 6 22 2.4e-06 0.00051 22.0 1.0 1 23 187 209 187 209 0.98 7 22 1.2e-05 0.0025 19.9 0.9 1 23 215 237 215 237 0.97 8 22 0.00012 0.026 16.7 2.1 3 23 245 265 243 265 0.97 9 22 1.6e-06 0.00033 22.6 1.7 1 23 271 293 271 293 0.98 10 22 0.061 13 8.2 0.6 1 11 299 309 299 312 0.92 11 22 0.013 2.7 10.3 0.4 1 21 384 404 384 407 0.88 12 22 0.0016 0.34 13.2 5.4 1 23 412 434 412 434 0.97 13 22 1.2e-06 0.00024 23.1 3.9 1 23 454 476 454 476 0.97 14 22 0.003 0.63 12.3 4.6 3 23 483 503 481 503 0.97 15 22 0.00057 0.12 14.6 0.1 1 23 508 530 508 530 0.98 16 22 4.6e-06 0.00097 21.2 0.9 2 23 539 560 538 560 0.97 17 22 0.12 26 7.3 2.1 1 23 566 589 566 589 0.93 18 22 0.00027 0.057 15.6 0.3 3 23 602 622 600 622 0.96 19 22 1.5e-06 0.00032 22.7 1.8 1 23 628 650 628 650 0.96 20 22 8e-08 1.7e-05 26.7 0.3 1 23 656 678 656 678 0.98 21 22 3.1e-07 6.5e-05 24.9 0.9 1 23 684 706 684 706 0.98 22 22 0.00071 0.15 14.3 1.7 1 21 712 732 712 733 0.96
Sequence Information
- Coding Sequence
- ATGATAGTCAAATCGGATTCGATAGTATCCATAATTGATATAAGTGCGGTGGAAACATTGGAACCATTGCCGATTGTCGATGCAAAAGATAAGCCTGTTGTGGACGACCAACAAGCCGTTGAACCTgGCTACCAGTGCTCACTTTGCACCAAGTGCTTCAAGGCCAAACACCTGTACGAAGGCCATCTCATAGCTCACAGCGACGCTCGGCCACATCGCTGCGACGTTTGCTCCAAGTCTTTCAAACGTACCAGCACCTTGGCTGTACACCGACGCATCCACACGCGCGAGCGCAACTACGTCTGCGACGTCTGCGGCCGAGCCTTTGTCCAGGCCTCCCAGCTCGCCACCCATCAACGCCGGCACTTCGAGAGATACAGTAAATTCTGCCTGATCTGCAACAAGGGATTCTTTACTAATGCCGAATTACACGGCCATATGAACATGAAGCACGCGGCTAACCAGCACGTGTGCTCGGTTTGCCAGAAGTCGTTTCCCAATAATCACACGCTGACGCATCACGCCAAGAGCCACGATCCGAACTACGAGCGGGTTAAGCACCAGTGCGAGATCTGCGGCAAGACGTTCGCCTTCAAGAACTCGCTGGTGGCGCACGTCAAGTCGCACACCGGCGAGAATAGGTACGACTGCCAGCTGTGCGGCAAGTTCGTCAGGTCGAAGAGTTCGCTTCGCGATCACCTGCGATTACACGGCGGCGAGAAGAACCTGTTCTGCGACGTGTGTGGAAAAGCGTTCCATAAGAAAACAACGTTGGTGGTGCACAAGAGGACGCACACCGGGGAGAAGCCGTACGTTTGCGACACGTGCGGGAAGGCGTTTACCCAGCACTCGACCCTCGTTATACATAGGCGGTATCATACAGGGCAGAGACCCTACCAGTGCTCCGTCTGTAACAAGTCATTCGCCTTCACCGAGCGTTATTATCCTCTGACGATCTTGGTCGACGAAACGAATCAACCCAAGACCGACATTCACGAGGCCGACAATTTCGTCATCAACTCTCCGCCTCCGATcacgaagaagaagcagcagatGCGTAAACAACTAGAGGAGGTGGCCGAGATCAAAGTCGAAGAGAACAGCGGTAACGACGGCGAGGCACTGCTCGACGATGATCTTCCTTTGGCCTTTTACTGTAAACCCTGCGGCACGTTCTTCGCCTCGCAAGAACAACTCAATTTGCACTCGGCCGAACAGCATGCGCGCAGGCGCTTCGATTGTGCCCACTGCACCAGGAGCTGTCGCAGCGCTTTGAGTTTGCGCCGGCACATGAAGCAGCACAGGAACGAGATCTTAAGTGGTAGAAGAGACACCGAGGAGAAGCCACGACAGGAAGAATTCGCGTGTGATACCTGCGGAAAAGTGTTTCGTCATAAGAGCAATTATCAGAAGCACTTGACGAGACATTCAGCAGGGGAACTGGCCTGCAAACACTGTTCAAGAAAGTTTCGGCTTTTCCGAGATCTCACGCGCCATGAGAAAACACACTTCCTTCCGAGCTTTCAGTGTAAAGAGTGTGACTACGAGACTACCGTGCTAGCTGCTCTAAGCATCCACATGTTGAGGCACACGAACAAAGCAGACCTGCCCTTGAAGTGTAACGAGTGCGACAAAAGGTTTAGAAAGGCGACGGAACTGCAAGAGCACTATAACATTCACTCGGGTGAGAAGCCGTTCGCCTGCCAGACCTGCGACGAAGCGTTCTTCCTGAGGCGACAGCTATCTGCTCACTGCAGGCGGCTGCATCCAGAACTAAAAGCTGAGAAAGTTACCAGTACTGCGTGTGATATCTGCGGTAGAGTTCTGGCCACGAAACGCTCTTTATTTAGACATAAGGAGAGTCACAACCCGACCAAGCTTTATCTTTGCGATTACTGCGGCAAGAGCCTTAGCTCGGCGGAACATTTAAAGAAGCACAGGAGAATACATACCGGCGAAAAGCCGTACGTTTGTGACATGTGCGGTAAAGGATTCACCGACTCGGAGAACCTGAGGATGCATCGCAGGGTACACACGGGAGAGAAGCCGTATAAGTGCGATCAGTGTCCTAAGGCCTTCAGTCAGAGATCCACGCTTACCATACACAGGAGAGGACACACGGGAGAACGTCCGTACGTCTGCCAGATCTGCCACAGGGGATTCTCGTGCCAAGGCAATCTCACTGCCCACCAGAAGTCTAACTGCTTAGGCGGCTTCCATAAACCGCGTAGCCCTATTTCCACCGTTTTTGAACCTCCCGCCTACTCCGCGTAG
- Protein Sequence
- MIVKSDSIVSIIDISAVETLEPLPIVDAKDKPVVDDQQAVEPGYQCSLCTKCFKAKHLYEGHLIAHSDARPHRCDVCSKSFKRTSTLAVHRRIHTRERNYVCDVCGRAFVQASQLATHQRRHFERYSKFCLICNKGFFTNAELHGHMNMKHAANQHVCSVCQKSFPNNHTLTHHAKSHDPNYERVKHQCEICGKTFAFKNSLVAHVKSHTGENRYDCQLCGKFVRSKSSLRDHLRLHGGEKNLFCDVCGKAFHKKTTLVVHKRTHTGEKPYVCDTCGKAFTQHSTLVIHRRYHTGQRPYQCSVCNKSFAFTERYYPLTILVDETNQPKTDIHEADNFVINSPPPITKKKQQMRKQLEEVAEIKVEENSGNDGEALLDDDLPLAFYCKPCGTFFASQEQLNLHSAEQHARRRFDCAHCTRSCRSALSLRRHMKQHRNEILSGRRDTEEKPRQEEFACDTCGKVFRHKSNYQKHLTRHSAGELACKHCSRKFRLFRDLTRHEKTHFLPSFQCKECDYETTVLAALSIHMLRHTNKADLPLKCNECDKRFRKATELQEHYNIHSGEKPFACQTCDEAFFLRRQLSAHCRRLHPELKAEKVTSTACDICGRVLATKRSLFRHKESHNPTKLYLCDYCGKSLSSAEHLKKHRRIHTGEKPYVCDMCGKGFTDSENLRMHRRVHTGEKPYKCDQCPKAFSQRSTLTIHRRGHTGERPYVCQICHRGFSCQGNLTAHQKSNCLGGFHKPRSPISTVFEPPAYSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -