Basic Information

Gene Symbol
-
Assembly
GCA_030522685.1
Location
JAPYZA010066137.1:1-611[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.2e-05 2.5 9.7 0.1 28 54 12 38 10 48 0.85
2 2 4.6e-17 1.4e-12 49.7 2.4 92 166 43 117 33 125 0.70

Sequence Information

Coding Sequence
ATGGCACATCTCCAAAATTGCGATAAACTTCGACAGGGTGGCAGCCCCCTCAGTATGAGCGCCACACACATGTACGTCGATCACTTCTCGCTGTCGAAGCAGGCGGCCGTGCATTCCGAGGCCCCGAACGACGACACCAACGAGCCGAACGACAGTGCCGAGAAGCTCGACGTCGATATCTACTACTTTCTACAGCCGGTGTCTACCTGGCAGAGTCGAGCTCTGCTGAGGGCCGCCGAAGTGAGCAGAATAAACACGATGAAGAAGGACAAGTGCAGGGAAATAAGGGCGAGCAAAGAGAACAGCAGGGACTATAGCTCTTGCGATTGTGGTGTGCAGCAGGACCAATGTAAAGTCTTGTCAATTCTTTGTCTTTCG
Protein Sequence
MAHLQNCDKLRQGGSPLSMSATHMYVDHFSLSKQAAVHSEAPNDDTNEPNDSAEKLDVDIYYFLQPVSTWQSRALLRAAEVSRINTMKKDKCREIRASKENSRDYSSCDCGVQQDQCKVLSILCLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00690173;
90% Identity
iTF_00690173;
80% Identity
-