Basic Information

Gene Symbol
CSRNP3
Assembly
GCA_030522685.1
Location
JAPYZA010007885.1:3464-9610[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 2.4e-102 7.6e-98 328.5 5.3 1 218 71 284 71 284 0.92
2 4 0.13 3.9e+03 -0.7 2.0 54 79 293 318 285 347 0.40
3 4 0.51 1.6e+04 -2.7 0.2 77 87 462 472 418 508 0.50
4 4 0.052 1.6e+03 0.5 1.0 51 103 528 574 514 588 0.48

Sequence Information

Coding Sequence
ATGCACCGGATTTTACGAGGTGCGAATCAGCTGGACGGCTTCGCGGCCGACGTGCCCAAGCAGCCTCTGCCTCTGAACTTCGGCGCGCCCGCCAAAAGCAGCCTGAAGCGCCGACGACTGACCGAGGACTGCATCGAGGACGCGACGAGCAGCGGCGAGCCCGATGCGAAGAGGCTCAACGTAGACGAGGCCTCCTCGGCGAGCGGCGCCAAGAAGAAGCGCAACATACAGTTCGACGCGGTCACGGTCTACTACTTTCCCAGGGCCCAAGGCTTCACCTGCGTGCCTTCACAGGGCGGCAGCACGCTGGGCATGAGCGCGACGCACACGCACGCCGAGCGTTTCTCGCTGACGGAGCACGCCGCGGAGCAGCGCCGGCTCCACCGGGCGAGGCTGGCCCAGCTGCGCTCGGAGCGCGCCGCGGCCAACCTGAACGCGGCCGAGGCCGCCTCGAGCTCGGAGGACCCGAGCGACGACACCGACGACGAGCCGAGCGACAGCGCCGAGGAGCTCGACATCGACAGCTACTACTTCCTGCAGCCGGTGCCCACCTGGCAGAGGCGGGCTCTGCTCAGGGCGGCCGGAGTGCGCAGGATAGATGCTGTAGAGAAGGACGAGTGTAGGGATATCAGGGCGAGCAGGGAGCATTGCGGCTGTGGGTGTAAAGGGTACTGCGATCCCGAGAGCTGCCCGTGTAGTAGGGCCAACGTCAAGTGTCAGGTCGACCGAGCTGGCTTCCCTTGCGGCTGCTCGCGGGACGGCTGCGCCAACAGTTCCGGCCGCATCGAGTTCAATCCCGTCCGCGTGCGCACACACTTCATCCACACTCTCATGCGGCTCGAGCTTGAAAAGAAGCCGGCCCACCACCACccgcagcagcaacagcagcgcgACGAGTCCGAGCACCAGCAGGAGTCGACGAGCGGCGCCAGCAGTCATCACCAGCATCATCATGCACAGGCCAACCACCACCACCTTCATCAAAGTCGACTCGCCGTGCCGCTCTCCTCGGTCCTGGACTCGGCCAACGACTGTCTCACAGGTGGCTTCACGAGCCTCCACTACGACAGCCAGGATAGCGCGCGGCCCGACAGTCTCGATCTCTACACGATAAGGGATGACTGTTACGGGAGCGAGGACTGCCTGCTGGATGGGGGCCAGAGAAAGATGCACTCGGAGTTTAGCCAGAGCTTTCAGCACTACGGGGCCCAAGGGCCCAGCGTTGGATTCCAGCAGAATCCGTACGCCGATTACCAGAGCTACCAGTCCCTGCCGTCGACCTCTAGGTCGCCCTTTCAGCCGCAATTTCAGACAAATTCCGGCTTCTCTCACTACGGCTCGTACTCGCAGGACTCCAGTTCCAACTCAAACGGCTGCCACCAGAGTCACTCGCTCatacagcagcagcaacaacagcacaGCAACGTCATCTACGACGCCCCCTTCGCACAGGACGAGGTGACAGGCTCCCAGTACACCAACCTCAACTCGATCCAGCCCATGAATTCGGTCGTCCAGCAGATTGGCAAGCTCGAACCCTTCTCCGAGCTATTGTCTGCCAGGTACTCCTATTACGACGAAGTCGTTAATCAGCAGCAAAATcaccagcagcaacagcagcatcaCGGTGCATACCACGCGAACACCGGCAAGATGGAGATAGAAAAGGGAGAATTAAATGTTAATGCGCCGCAGGAACAGTTGACCGAGGAGGATTGCGACGAGAACTTCGGCGAGATCATCAAGAAGTCTATGGTCGAAACTGTGTCTGCTTAG
Protein Sequence
MHRILRGANQLDGFAADVPKQPLPLNFGAPAKSSLKRRRLTEDCIEDATSSGEPDAKRLNVDEASSASGAKKKRNIQFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLTEHAAEQRRLHRARLAQLRSERAAANLNAAEAASSSEDPSDDTDDEPSDSAEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCSRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKPAHHHPQQQQQRDESEHQQESTSGASSHHQHHHAQANHHHLHQSRLAVPLSSVLDSANDCLTGGFTSLHYDSQDSARPDSLDLYTIRDDCYGSEDCLLDGGQRKMHSEFSQSFQHYGAQGPSVGFQQNPYADYQSYQSLPSTSRSPFQPQFQTNSGFSHYGSYSQDSSSNSNGCHQSHSLIQQQQQQHSNVIYDAPFAQDEVTGSQYTNLNSIQPMNSVVQQIGKLEPFSELLSARYSYYDEVVNQQQNHQQQQQHHGAYHANTGKMEIEKGELNVNAPQEQLTEEDCDENFGEIIKKSMVETVSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-