Basic Information

Gene Symbol
CDC5L
Assembly
GCA_030522685.1
Location
JAPYZA010004412.1:1141-1605[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-13 3.4e-10 41.6 0.1 4 45 11 53 8 54 0.94
2 2 6.8e-14 1.9e-10 42.4 0.1 1 43 60 101 60 104 0.94

Sequence Information

Coding Sequence
ATGCCGCGTGTTATGGTAAAGGCCGGCATTTGGCGGAATTCCGAAGATGAAATTCTTAAAGCCGCAGTCATGAAATATGGCACACAAAATTGGAATCGTCTATCTTCGCTTTTACCCTCAAAGAATGCATCTTTATGCAAAAGCAGATGGTTCCAGTGCCTTGAACCAAGAATCAAGAAGACAGAATGGAGTAGAGAGGAAGAggaaaaattattgcatttagtTAAGATCATGCCTGCTCAATGGAACACAATTGCTCCAATAGTAGGACGAACAGCAGTACAATGCGTAGAACACTATACATATTTGATTGATCAAGCACTAGAAAGGAAAGGAGATGAAAAACTGGATGatccttaa
Protein Sequence
MPRVMVKAGIWRNSEDEILKAAVMKYGTQNWNRLSSLLPSKNASLCKSRWFQCLEPRIKKTEWSREEEEKLLHLVKIMPAQWNTIAPIVGRTAVQCVEHYTYLIDQALERKGDEKLDDP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00690109;
90% Identity
iTF_00690109;
80% Identity
-