Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_030522685.1
Location
JAPYZA010000923.1:1-21622[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.1 2.6e+04 -3.2 0.0 8 22 34 48 32 48 0.84
2 3 8.7e-18 3.2e-14 54.1 0.1 1 45 451 496 451 496 0.97
3 3 2.3e-18 8.4e-15 55.9 0.0 1 43 907 950 907 952 0.94

Sequence Information

Coding Sequence
ACACGCGCAAAATTGCAGCAGGCGAAGCCGGCGGACTCGCCGAGCCAGCCGCTGAAGGCGAGCCTCGCGaatcaccagcagcagcagcagcgggcgATCGCAGCGGCAAACTGCACATCGGGCGGCATCTCGCCTCGGCGCGCCGACGAGTCCGCGGCCACGGAGAACGGCCGAGTGCTGCTCGCCGAGGGTGCCCGGGAGAACGGGGACACAGCGACGACAGTagcagcgacgacgacgacgacgacgacggcggcgCAGCTGAGCAGCGAGAACGGCCCGATCGAAAACGAAAACGGCAGGACGGGGCTGAGCGGAGAGTTGGAGGAGCTAGAGGAGGGGGAGGCAGCGGGGGCGGCGGCGGCTACGACGGCggaggctgctgctgccgcgGCGACGACGAGGCCGGACGGCGAGGACGAGGAGAGCCTCAGGATAAAGAAGGAGCGACTCGACGAGAGGATAAGGCTGAGCCCGCTCAGGGAGGacgagagcgcgacgacgaacGACGGACGGCTCGAGAAGACAAACGACACGGAAGGGACCAAGGAAGTGAAAGAGGAAGCGGGAGCGGAGACACAGCGGGTCCAGGTGACGCAGGGCCTGCTGAGGGTAAAGAAGGAAGAGGAGCTACAGGAGACGCCGGGCCCAGGTGGCGGGCTGCCTGGCAGGCCGACCTCGACGCCTCTGAACAACAACAACGGGCCGACGGTgaacagcggcggcggcagcagtgGCCTGGCCGAGCTGAGCCGCAGCGCCTCGACCCCGCCGAAGAAGGAGGTCGTGTTCTGCACGCCCTCGTACGTCCTTGGCAGGCGTGCGAGCCCGCCGCCCGAGGACTGGAAGCCGCTCGACAAGTGCTACTTCTGCCTCGATGGCAAGCTGCCGCACGACGAGCAGCCGCCTCTTAGTCCACAGAGcgacagcagcaacagcagccgaTCGGCGGAGTCGCCCATGTCCGTGCAGGTCGATCCCATGGCGGCGTCGGTCGTCGCGGCTGCCCTCAGCGGCACCTATCCGACCCTGCTGCCCCAGTGGTGCCTGCCGCCGCGGGAGCCGCCCCACGCGGTCATCGCCGCGGCGGCCGCCGCAGCTGCTGCTCAGCAGCATCACCAGGAGAACGCCGGCGCCGATCAGCCCCTCGATCTCTCCGCCAAGCCCAAAAACTCTCAGGACAACAACATATCTATACTGGAGCAGAAGATACCTCTACGTATGCCGGCGGCCATCGATCCGAAAACTATTTTCAACAGCTATCGGGGGAAGCCGAGGGTGACGGCCGGTCCAGGCGGCACTACTGTGCCGGTGGTGTCAaccggcggcggcggtggccgTCGCACCTACACCGAGGACGAGCTCCAGGCCGCGCTGCGCGACATCCAGAGCGGCAAGCTGGGCACGAGGCGGGCCGCCGTACTCTACGGCATACCGCGCAGCACCCTGCGCAACAAGGTCTACAAGCTAGCGATGGAGCGCCAGAGGGACGCGAGCCCCTCGGCCGCCAATGTTGTCGTTGCCAATGTCGCCGCCAACACAACAGCACACAACAACAACATCAACAAGAACGAGGTGGCGACGACGGCGGCCAGCGACGCCAGCACCATCGCCGCCACCACGACCACCACCACCATCACCACACCAAATACTACGACCCACCGACAAAACGCCACTCCGCTACCGCAAGTGGACGAGGTGGACGACAAGGAGCTCTCGGGCGCCGAGGAGGAGAAGGAGGTAGAGAAGGCCCTGCTGAAGCCGCTGCTTTCGTTCGAGGACCTCGTGCGATTCTCCAGCCTGGAGGGCAGCAGCGGCGAGTCGCTCAGGGCGCTGTTACAGCGCGGCCAGGAGTCCGGCTCGGCCGAGTGGTCGGCATTCGAGCACGCAAACATCGGGCCTTATATACAGAAAATGCTGGCCGCCGCCGCGCCGTTCAAAGGAATGGAGTCACAAGACTACAGGATTCCGGAGGTCATGCGACGGTTAATGTGCGAGGACAAAAAGCTCAGCAAGGAGGCTAACGTCAATGGCGATCAAATACAGCATCTTCATCATGCTGTACTGCAGCATCGTCTCTCACAGTCGACTGGCCAGCGGGCGCCGATGACGAACGACGACTTCAATCCGGCGATCGAGGAGGAGGCGAGCGACAGCGGCCAGGGCCGGCCCATCCTCAAGATTCCGTCCTACAAGCCGGCGAGCAGCGCCGGCGCGGCCGGTGGCCCAGCTCCCAACAAGAACGGCGCCGCCGATCAGCCTGGCTCAGCGGCGGCCTTCGCCCAGAGCTTCGCGGCTGCTGCAGCCGCGGCGGCCAACGCCGTGGCTGGCAGTCCGGCCCTCCTGGAGCGCGCCAGCCCGGCGTTCTCGGGCACGAGCTCGCCGACTAACTCGCTCGTCGGCAAGGGCATGGCAGTCAACTTCCGCGACGTCATCGCCAAGAGCATCAGCGTCAAGTTCCAAGAGGGACAGACGCCGGCCGGCATTCCAGGTCAAGGTGCACAGACGGTACAGTCGATGATCACCGAGCCAAACCCGTACAAACGCGGTCGCTTCACGCCgccgcagcagcaacagcagacCCAGCCGACGTCGCAGGCGCAGTCGCAGCAGCAGGCAAAGTCCAGCGCGGCTCAGCAGGCGCAGGACAAGCAGCAGAACAAGCCGAGCGCCGGCGGCAAAGGCACGAGGCCGAAGCGCGGCAAGTATCGCAACTACGACCGAGACAGCCTCGTCGAGGCGGTGCGCGCTGTGCAGCGGGGCGAGATGAGCGTGCACAGGGCCGGCAGCTACTACGGCGTTCCACATTCCACACTCGAGTACAAAGTTAAGGAGCGGCATCTTATGAGGCCGAGGAAGAGGGATCAAAAGCAGCCAGACGACAAAGCGAAAGAGATGACTGCCACGGGTTCAGCGCTGCGCGCAGCGCCCTCGACGACGCCGGAGAAGAAGCCGATTCTGAAGCCCCAGAAGCCGTTCGGTCCAGGAGCGGCTGGCGGTGGTGCAGCTGGTGGTGGTACCGGTGCCGGCATGCCCGGGCCGAATGGCCTCAAAATGCCGCCCTTCGGTATGGAAAGCATGCCTCACCTGCCGTTCGCCCATCCCTTCAACTTCTGGGGCCCGGCGCCCTTCATGCCTACGCCCTTCATACCCGGCGGGCCCAACGTCCCGGGCATCCTACCGGAGCAGTACTTCGCCACGCAGCGTATGCGCGGCATCCAAGAGCAACAGCGCAACGCCATCGCCCAGCAACAGCGCGACGGCGCGCAGCCAGTCGAACAGCCAGGTACTTCGAATTCACGAGGCACCTCGCTGATGAAGTCGCCGCGCGAATTAGCCGAGAGCCTGTACGACGGCACGGCGGCCAACGGCAGCTTCCTCGACAATCTGATAAGGTCAAGCCTGGACTCGGGAAtaccgcgcgagcgcgccatCGCCGAAGCGCGCAGCAACGCGGCGGCTCAGTCtggccagcaacagcccgagaACCTGGGCAGCAGCAAGGTCCTCATAGACCAGCTCTGCAGGAACTCGAGGCGCACGCCACTGCCGCGAGCAATGCAGCAGGACAGTAGCGAGGACGAGGCGACGCCTACGAACTATAAAACGACGCCCCAGAGGGCGCTGCCAGAGCGACCGGAGCGCGTGCCCACCGTAGACTTGAGTCCTTCGCCCTCGGAGCGCGCCCGAGCCACAGACGAGGGCAGTGAGCGAGGCCTGGCCTCGCCGCCTACGCCACTCTCGCTCTCGAGGCACAGTGCCGGCTCAGGCAGGGAGGACGATACCACCCGGGACTCGAGGAGCAGCCGGGAACGCGAGGTACACAACGGCGGCGGCAGCGAGAAGCCGGAGGAGCACCCAGTAGTCGACTCCACGAATAAGAAGCTGAACCACTACCCGGACATACAGAACCTCTACGCCGTGTCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCAACACAAGGATTTGGCGGTCGCCGGGGCAGCGCCCGGCGCCGGCCTGGTGGTGCAGCTGCAGCGCGGCTACAGCAACAGCAACTCGGCCAGCGCAGCCGGCAGCAACGGTCGCCCGGCCACGCCGAACAATCAGCAGTCGCCGCAGAAGCAGCCGCCGTCAGCAGCAGTGGCAGCCCAGGATCAGCGTGGACTCTCGCCGAGCCCTACGACGGTGACGAGGACGACGACGGCCGTAGCGACGACGATGGAAGAATCGGTAGAGCAGTAG
Protein Sequence
TRAKLQQAKPADSPSQPLKASLANHQQQQQRAIAAANCTSGGISPRRADESAATENGRVLLAEGARENGDTATTVAATTTTTTTAAQLSSENGPIENENGRTGLSGELEELEEGEAAGAAAATTAEAAAAAATTRPDGEDEESLRIKKERLDERIRLSPLREDESATTNDGRLEKTNDTEGTKEVKEEAGAETQRVQVTQGLLRVKKEEELQETPGPGGGLPGRPTSTPLNNNNGPTVNSGGGSSGLAELSRSASTPPKKEVVFCTPSYVLGRRASPPPEDWKPLDKCYFCLDGKLPHDEQPPLSPQSDSSNSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPREPPHAVIAAAAAAAAAQQHHQENAGADQPLDLSAKPKNSQDNNISILEQKIPLRMPAAIDPKTIFNSYRGKPRVTAGPGGTTVPVVSTGGGGGRRTYTEDELQAALRDIQSGKLGTRRAAVLYGIPRSTLRNKVYKLAMERQRDASPSAANVVVANVAANTTAHNNNINKNEVATTAASDASTIAATTTTTTITTPNTTTHRQNATPLPQVDEVDDKELSGAEEEKEVEKALLKPLLSFEDLVRFSSLEGSSGESLRALLQRGQESGSAEWSAFEHANIGPYIQKMLAAAAPFKGMESQDYRIPEVMRRLMCEDKKLSKEANVNGDQIQHLHHAVLQHRLSQSTGQRAPMTNDDFNPAIEEEASDSGQGRPILKIPSYKPASSAGAAGGPAPNKNGAADQPGSAAAFAQSFAAAAAAAANAVAGSPALLERASPAFSGTSSPTNSLVGKGMAVNFRDVIAKSISVKFQEGQTPAGIPGQGAQTVQSMITEPNPYKRGRFTPPQQQQQTQPTSQAQSQQQAKSSAAQQAQDKQQNKPSAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKAKEMTATGSALRAAPSTTPEKKPILKPQKPFGPGAAGGGAAGGGTGAGMPGPNGLKMPPFGMESMPHLPFAHPFNFWGPAPFMPTPFIPGGPNVPGILPEQYFATQRMRGIQEQQRNAIAQQQRDGAQPVEQPGTSNSRGTSLMKSPRELAESLYDGTAANGSFLDNLIRSSLDSGIPRERAIAEARSNAAAQSGQQQPENLGSSKVLIDQLCRNSRRTPLPRAMQQDSSEDEATPTNYKTTPQRALPERPERVPTVDLSPSPSERARATDEGSERGLASPPTPLSLSRHSAGSGREDDTTRDSRSSREREVHNGGGSEKPEEHPVVDSTNKKLNHYPDIQNLYAVSTDKKSACDSKLIVDHSSQKTQQHKDLAVAGAAPGAGLVVQLQRGYSNSNSASAAGSNGRPATPNNQQSPQKQPPSAAVAAQDQRGLSPSPTTVTRTTTAVATTMEESVEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00690081;
90% Identity
iTF_00690081;
80% Identity
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