Eazu028290.1
Basic Information
- Insect
- Eupelmus azureus
- Gene Symbol
- -
- Assembly
- GCA_030522685.1
- Location
- JAPYZA010025967.1:1-4621[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.4e-13 3.1e-09 38.1 0.0 1 39 264 303 264 307 0.90 2 4 6.8e-12 2.5e-08 35.2 0.0 2 39 319 356 318 359 0.94 3 4 9.3e-19 3.4e-15 57.2 0.0 2 45 374 418 373 418 0.97 4 4 0.0019 6.9 8.2 0.1 1 14 425 438 425 439 0.92
Sequence Information
- Coding Sequence
- CTCAAGAGGCACCACCACCACCCGGGCCGCTACAAGAGGCCGCGCGGCTCCGCGTCTGCCTCCTCGTCCTTCGGCAAGCGCGCCAGcgccgcagcagccgcagcagcagcagcagccgcgggCTCCGAGCACTGTCATTATCATCATCACGCGGACCCCGACAAGCATCACAGCAAGGATTTCGTCGAGAGCTACGTGCGTGACTGCAACAAGGAGAACCGCCGAGACTGCTGGCCAGCTGAAGATGAGGAGTGCATGGAGACGACAGGGCCGGGCGCAGCAGTAGTCCTGGACGCGTGCCAGCGCGataacaacaacagcagcagcgccAGCAACAACGCCGCCGGCAACGCAGCGACGAACAACAACGgtgACATGTTCTGTCACACAGGTCTCGGCCACTACGGTCACCATCCAGATCCGGGCGAGGTAGACCTGCCGCCCGAGACGCAGCCCACGCCGCCCAGCGCCACCCTAGTCGGCACCACCATCACCCACCTCAGGGATCCCGATCACCACACGGCAGATATCCAAAGCTGCGACAGTGTGAAGATAAAGTTCGAGACGCTGCACACGATGGACTCGTCGGACACGATCGACATCGACAGCCACATGTCCGACCGGGCGAGCGTAAGCTCGAAGAACGCCGACGACAACATAATGATGATCACGCCGGAGCTTCTTGGCCTGATGCCCTCGGGCAGCTCGGTACATTCTGACTCGGGTGAGAACAACTCGCGCAGCCACTCGGGCCAGTCGGGCTCGCATCACCACGGCTCCAAGTCCTGGACGCAGGAGGACATGGACGCGGCCCTCGAGGCGCTCAGGAATCACGATATGAGCCTTACCAAAGCCTCCGCGACCTTCGGCATCCCATCGACGACGCTGTGGCAGCGCGCCCACCGGCTGGGCATCGACACGCCAAAAAAGGACGGGCCGACCAAGTCGTGGAGCGACGAGAGCTTAAACAACGCCCTGGACGCCCTGCGCACCGGCACGATCTCGGCCAACAAGGCCTCCAAGGCCTTCGGCATACCGTCGAGCACGCTTTATAAAATCGCGAGGCGAGAGGGCATCAGGCTGGCCGCGCCGTTCAACGCGAGCCCGACCACCTGGTCGCCGGCTGATCTGGATCGGGCCCTCGAGGCGATCAGGTCCGGCCAGACGTCCGTCCAGAGGGCCTCGACTGAGTTCGGCATACCCACGGGTACACTGTACGGGAGGTGCAAGCGCGAGGGCATCGAGCTCAGCAGGAGCAACCCGACGCCCTGGAGCGAGGACGCGATGACGGAGGCGCTCGAGGCCGTGAGGTCAGTGTGCGAGCTGCTCGATTTGGGCTCGAGGgggcaaataaataaatatgtaaatcgTGACAGAAAATTGGGGAGGTATACTTGA
- Protein Sequence
- LKRHHHHPGRYKRPRGSASASSSFGKRASAAAAAAAAAAAGSEHCHYHHHADPDKHHSKDFVESYVRDCNKENRRDCWPAEDEECMETTGPGAAVVLDACQRDNNNSSSASNNAAGNAATNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHTADIQSCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNADDNIMMITPELLGLMPSGSSVHSDSGENNSRSHSGQSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRSVCELLDLGSRGQINKYVNRDRKLGRYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00690080;
- 90% Identity
- -
- 80% Identity
- -