Basic Information

Gene Symbol
ct
Assembly
GCA_030522685.1
Location
JAPYZA010004226.1:410-15885[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2e-27 1.8e-23 84.1 0.0 2 72 433 504 432 509 0.95
2 3 2.9e-32 4.5e-28 98.8 0.0 3 77 903 978 901 980 0.96
3 3 1.1e-30 1.8e-26 93.7 0.0 3 75 1143 1216 1141 1220 0.95

Sequence Information

Coding Sequence
ATGGAAGAGGTGTCGAGGCTCCAGGCGCACCTACAGCGCCTCCAGGAGACGAGCGCCCAGACGACGGCGAGGTTCGAGGAGGAGCTCGAGGCGCGCCGGCAACACATCGCCCGACTCGAGAGCCGGCTCGACCGCCAGAAGGACTACGAGGACCTGAAGCGCGAGATCAGCGTCCTGAGGTCCGTCGACCTGTCCCAGATACCGACCGGCGAGCCCGGCAAGAGCCTGGAGCAGGTGCTTATCGAGCGGTCCAAGGCTCTGCAACAGGCCGAGACGCTCAAGCCGCCCAGCACGCCCGATGCACTCGGTGGACTTGCGTCGCCCCTGCAGCGTGCCGCGACCGCCTCGCCCCACAACGCTGCGGTGATCGCCGCCTCATCGGCGGCGCCCCCATCCAGCACCCTCGTGTCATCCTCCCAGTCGTCACACCCGAGCCGCTCCACCCCGACTCCCTCCTCGTCCTGCGGCGCCACCTCGACCACCTCCTCGCTCCTGTTTCCGCCGCCCCTGCAAAACGTCGAGACCTTCGGCTCGTTCCTCGGCGAGGAAATCGTCGCCAACTGGAGGCGATCCCTGGAGAGGTCAATCATgagtcagcagcagcagcaacagcagcaacaacagcagccgACGTCCCAAGCGTCCACAGTCGGCCTACATCCGAGTGCGCTGCTCGGCTCGCAGGCACCGCCACAGCAACAGCCGCTGCCGGCTCAGCCTCCGCCTGTGGCCAGCGCCGCCGCTCTAAATCACCACCTTCCGTCGCCAACAGATCCGATCTCAGCATCGAGCACGCCCGCCAAGTCGAGCACGCCCCTCCTCGGCAGCGCCAGCTCGGCCGGCCTCGACTCCGCCGAGAAGGCCACGACGCCCGTCTCCTCGGGCCACGAGACCCCGGCGCCGCCCACGCCCTCCTCCACGACGACGCTCACCTCGCCGCCGATCCAGCTGCAGCCGGTCGAGCTCAACGGGCCCATCTCCAGCAATCCGGCAGCCCAGCAGCCGCCGCCCAAGAGCCCAGCCGAGGAGTCGGCCATCTgccacaacaacaacaacaacagccaCCACCTGGCCAACAACAACATCGGTGCGGCCGCCGCGGGCGCTGGACTCAGCGTCCTGGACAGCCTCAAGAGCCCGTTCCGCTTCGACGAGCGCTCGCATCCGTTCAGATTCGGCGACGAGTTCGGCGCGGCCGGCATGGCCGGCAGGCTCGGCGAGTCGCTCATACCGAAGGGCGACCCGATGGAGGCCCGGCTCCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCTCGCAGAATCTGGACACGCTGCACATCGCGAGGCGGGTGCGCGAGCTGCTCTCGATACACAACATTGGCCAGCGGCTCTTCGCGAAATACGTGCTCGGGCTGAGCCAGGGCACGGTGAGCGAGCTGCTGAGCAAGCCCAAGCCCTGGGACAAGCTCACGGAGAAGGGCCGGGACAGCTATAGAAAAATGCACGGCTGGGCCTGCGACGACAACGCCGTCATGCTGCTCAAATCCCTCATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGCATGCCGTTCACGCGCGGCCCCCAGGAGGGCGGGCCGGGCAGCAACAACggcaacaacagcaacagcggCCCGGTGGTCCCGGGCTCGGCCGccgctgcggctgctgctgcggccGCGGCCGCCCAGGAGATGAGGGacgaggagcagcagcagcgcatcGCGCACATGCTCAGCGACAGCCAGATGAGCCACCTTAGCAGGCAGCAGAGCGAGGCCGGCGACGCGTCGAACGACGCCTCCGACAGCAAGAGCCCGAGCAGGCTCGGCAACTGCCCCAGTCCGTTCGGCAAGGACGCCGGCCGCAGTAGCAGCCTCGACAGCCAGAATCGCAGACTGAAGAAGTACGAGAACGACGACATTCCCCAGGAGAAGGTGGCCAGGATCTACCAGGAGGAGCTGGCCAAGATTATGGGCCGGAGAAACGAGGATATGCGCGGTCCAAGAGACTTTCCTACGAGCGCGATGTTTCCGCACTTTTTCAGCGGGCAGAACCTGCAGGGCATGGAGCGCACGCAGGAGGAGATCCGCATGGCCCTGGACGCCTACCACCGCGAGCTCCAGAAGCTGAACGTCGCCCAGGGTCTACCCTACCCGCCTCAGATCTCGGGCCTCCTGGCCCTCCAGCAGCACGCCATCCAGCAGCATCACCTGGCCACGAACGGCGGTGGCGCCGGCGCGGGTGCCGGCTCCGCAGCCGCCGCGGCCGCggcagccgcagcagcagcggcggcggcggcccagGACCTCAGCCTCGGCAACATCCTCAGGAACAAGATGATCAACGGCGTGTCCGAGGAGGAGAAGGAGAAAATGGAGGAGGCCATGAGGCACGCGGGCAGCGCGTTCTCCTTAGTGAAGCCAAAACAGGAGCCAGGCGTGAGCGTCGGCAGCGGCGCCCAGTCGACGCCCGGCGGCTCGAGCGCCAGCTCGCCCCTCGGCAACTCGATCCTGCCGCCGGCGATGACGCCCAGCGAGGAGTTCCCCGGCGCCGCGGCCGCCAGTCCGCTCCAGCGCATGGCCTCCATCACCAACAGTCTCATCAGTCAACCGTCCACGCCGACTCACCACTCGGCCAATCAGCGGCCGCTCAAGGCCGTGCTGCCGCCCATCACCCAGCAACAGTTCGACATCTACAACAACCTCAACACCGAGGACATCGTCAAGAGGGTGAAGGAGCAGCTGTCCCAGTACTCGATCTCGCAGCGCCTGTTCGGCGAATCCGTCCTGGGCCTGTCCCAGGGCTCCGTGTCGGATCTCCTGGCTCGGCCCAAGCCCTGGCACATGCTCACGCAAAAGGGCCGCGAGCCGTTCATACGCATGAAGATGTTCCTCGAGGACGACAACGCGGTGCACAAGCTCGTGGCGAGCCAGTACAAGATAGCGCCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCGTGCGGCACGCCGATGAAGCCGATGCCACCGACCAAGCTGGTTCAGGAGCAGCTGCAGAACGCCGCCAAGGCCCAGGCCGCCGCCCAGGCAGCTGCCCAGGCCGCAGCGGCCGCCCAGCATCAGCAGGAGAGCCACATGCAGCTCGGCCCGCCCCAACAGAGTCCGCAGCACCCGACGCTGCCCCAGAGCTCGCCGATGATGCTGACGCCGCCGGGACCCATCCTGCCGCACAGCCAGCTCAGCATGCAGGAACTccagaagaagcagcagcagcagcagcaacagcagcaacaacagcagcaccAGGGACCCCCGATGAACCTGCACTCGCCGCACCAGTTGGCGCAGTCGCCCATGCGCGCCCTCCACCCCCACATCTCGCCGAGCGTCTACGAGATGGCCGCCCTCACTCAGGATCTCGACACCCAGACCATCACGACCAAGATCAAGGAGGCTCTGCTGGCCAACAACATCGGCCAGAAGATCTTCGGCGAGGCGGTGCTCGGGCTGAGCCAGGGCTCCGTGAGCGAGCTCCTGAGCAAGCCCAAGCCCTGGCACATGCTCAGCATCAAGGGACGCGAGCCGTTCATTCGCATGCAGCTCTGGCTGTCGGACGCGCACAACGTCGACCGGCTCCAGGCGCTGAAGAACGAGCGCCGCGAGGCCAACAAGAAGCGGCGCAGCAGCGGCCCCGGCCACGACAACAGCTCCGACACGTCGAGCAACGACACCGCCGAGTTCTACCACGCGGCGTCGCCCGGGCCCGGGCCCACCTCCGCCAAGAAGCAGCGCGTCCTCTTCAGCGAGGAGCAGAAGGAGGCGCTGCGGCTGGCCTTCGCTCTCGACCCGTACCCGAACGTCGCGACGATCGAGTTCCTCGCGAGCGAGCTGGCCCTCTCCTCGAGGACGATAACCAACTGGTTCCACAACCACCGCATGAGACTGAAGCAGCAGCCGCCGCACGGCCAGCCGGAGCCGCAATCGCCACGCGAGCCCGGCCAGCCGTTCGACCCCGTGCAGTTCCGGCTGCTCCTCAACCAAAGACTGCTCGACATCCAGAAGGAGAGACTCGGCCTGGGCAGCGTGCCCCTCACCTATCCGCCCTACTTCAACCCGAACCTCGCCGCCCTCGTCGGCAACGCGCTCAAGGAGCAGTGCTCCGGCCTCGACCTGTCCATGGGCTCGCTCAAGCGGGAGCCCAACCAGGAGTTCGAGGACGAGGACGCCGAGGACGCGATGAGCAACCTCGGCAGCGAGGACTCGGAGGGCTCGGCGGCCAGCGTGAAGCGCGAGCCCACGGAGACGCCCGTGCCGGCCAACACGTCGAGGTCGAACCGGCGGAAGCCCGCGGCGCCCCAGTGGGTGAATCCGGAGTGGCAGGAGCCAGCGAGGACCGGCGACGAGGTCATCATCAACGGCGTCTGCGTCATGCAAACCGACGACTACGGCGTGAAGCGAGAGGCCGAGGAGACGGTGAGGGTGGAGCCGACGCCGGTGCAGGACCGATACGAGGAGGACGCCCAGAGCGACGTGTCCTCGGCCGCCTCGGCGAGCAACGTCCCGGACCGTGAGAGCCCCTCGCCCAGTCCCAAGTCGGCGCAGAACAGCCCGGTGCCCTCGCCCAGGCCGGCCTCGGCGCCCCAGCCGGCCGAGGACAGTCCCAAGGACATCGTGAAGCACGAGCCCGAGGAGACGTGGGACTATTGA
Protein Sequence
MEEVSRLQAHLQRLQETSAQTTARFEEELEARRQHIARLESRLDRQKDYEDLKREISVLRSVDLSQIPTGEPGKSLEQVLIERSKALQQAETLKPPSTPDALGGLASPLQRAATASPHNAAVIAASSAAPPSSTLVSSSQSSHPSRSTPTPSSSCGATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQQQQQQQQQQPTSQASTVGLHPSALLGSQAPPQQQPLPAQPPPVASAAALNHHLPSPTDPISASSTPAKSSTPLLGSASSAGLDSAEKATTPVSSGHETPAPPTPSSTTTLTSPPIQLQPVELNGPISSNPAAQQPPPKSPAEESAICHNNNNNSHHLANNNIGAAAAGAGLSVLDSLKSPFRFDERSHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVMLLKSLIPKKEYVSGKEQGMPFTRGPQEGGPGSNNGNNSNSGPVVPGSAAAAAAAAAAAAQEMRDEEQQQRIAHMLSDSQMSHLSRQQSEAGDASNDASDSKSPSRLGNCPSPFGKDAGRSSSLDSQNRRLKKYENDDIPQEKVARIYQEELAKIMGRRNEDMRGPRDFPTSAMFPHFFSGQNLQGMERTQEEIRMALDAYHRELQKLNVAQGLPYPPQISGLLALQQHAIQQHHLATNGGGAGAGAGSAAAAAAAAAAAAAAAAQDLSLGNILRNKMINGVSEEEKEKMEEAMRHAGSAFSLVKPKQEPGVSVGSGAQSTPGGSSASSPLGNSILPPAMTPSEEFPGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDIYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAAAQHQQESHMQLGPPQQSPQHPTLPQSSPMMLTPPGPILPHSQLSMQELQKKQQQQQQQQQQQQHQGPPMNLHSPHQLAQSPMRALHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKKRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELALSSRTITNWFHNHRMRLKQQPPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLDIQKERLGLGSVPLTYPPYFNPNLAALVGNALKEQCSGLDLSMGSLKREPNQEFEDEDAEDAMSNLGSEDSEGSAASVKREPTETPVPANTSRSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKREAEETVRVEPTPVQDRYEEDAQSDVSSAASASNVPDRESPSPSPKSAQNSPVPSPRPASAPQPAEDSPKDIVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00645839;
90% Identity
iTF_00689953;
80% Identity
iTF_00690970;