Basic Information

Gene Symbol
Xbp1
Assembly
GCA_030522685.1
Location
JAPYZA010009259.1:999-3841[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.3 6.1e+03 -0.9 0.3 14 25 87 98 86 102 0.84
2 3 5.5e-13 1.4e-09 39.5 14.0 2 63 105 166 104 168 0.94
3 3 2.5 6.4e+03 -1.0 0.2 35 49 230 244 227 252 0.74

Sequence Information

Coding Sequence
ATGAGCGCGTTGAAGAGCGTGATCATCACCCTGCCAGCCAAGGGTCTAACCCCGACGGGCAAATCGACGCCTGGGATTATCACTAGCGGCGAGCTGGTGAGGCCCCTGACCCCGGCGCAGAAGCTCAACTTCACGACCTCGATTCTGATGGATCACAAGATCAAGATGGAGAGCGGCGCGAAGAAGCAGCAGCTCCAGCCTGTCAAGCATATGGAGCTGCAGAGCCTCGACGCGGAAGTGGTTTTTAAGCAGGAGGACTGCGCGGCGACGGCGGCCAGGGGCAAGAAGCGACGGCTGGATCATCTTACGTGGGAGGAGAAGTTACAGAGGAAaaaactaaagaACAGAGTAGCAGCACAAACCTCTCGAGATCGCAAAAAGGCAAAACTGGATGAACTGGAAGAAACAGTCAGAATTCTCAGAGAAAGGAATGAAATATTAGCAGAAGAATGCACAATGTTGAGAACACAAAACAAATCTCTTGTCACAGAAACAGAGAGGCTAAAAAGGAACAAAGAGTCAGTAGAGATTAAGGAATCCAAGGAGCAGGTGTGCTCGATGTGGTGGAGCAGTACAAACGGCACGACCTCTGACACTGGCGCCAAGCGCAACCATACTCCTGAAGATCCTGACACTCTACCTCCTCTCGAAGACCTATTTAGCGAACTCCAAGGAGACGATTACATCGAAAGACTCGAAGAGCTTGCCGAAAGCCTTCTGCGAGAGGTTACCGCTGAAGTGGAAACAAATTCTACTCAATCAAATGAGCAGAAACCAATTAAACAGGAAAGTGTCAAAGAACTTGACACTACAGAAAAAATGGTGGGGGAGGCATCAAGTTATGTGGAAGCCAGTACACCCAGTGAAAGTATAACAATAGACCAACTCCAGTGCACATCTCAAATCATTCCGGACAACAATACCAGCAACACGGTCTCGCAAGTGCCGACCGTTACGCTTAATGAATCTGGCCCAATTACGATTGCGGAAAACGTCGAGATCAAGGAAGAGCCCATACACGACGCTGAGATGGTGTACGGAACTTACGATGAGGCTACTAACTGCATAACGATTATCTACCCCGAGGAAGACACAACGAAGCTCACTGTCCCGCAGCAGCAACAGTATAATCAACAGCTGCCTTCGCCCACGCACTCCTACGACTCTATGTCACCAGCGAGCCTTCACTCAGATGACACAGACATGGTCAGCGTGCCCTCGAGTAAACTCGACGGCGCGCATTCGGATTGCGGCTACGAGTCGCACGGCTCACCCGCGAGTTCCGTCTGCGGCGCTAATGGCGCGCTTACAGATCTCTGGCACGAGAGCTTTTCGGAGCTGTTCCCTAGCCTTGCCTAA
Protein Sequence
MSALKSVIITLPAKGLTPTGKSTPGIITSGELVRPLTPAQKLNFTTSILMDHKIKMESGAKKQQLQPVKHMELQSLDAEVVFKQEDCAATAARGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEETVRILRERNEILAEECTMLRTQNKSLVTETERLKRNKESVEIKESKEQVCSMWWSSTNGTTSDTGAKRNHTPEDPDTLPPLEDLFSELQGDDYIERLEELAESLLREVTAEVETNSTQSNEQKPIKQESVKELDTTEKMVGEASSYVEASTPSESITIDQLQCTSQIIPDNNTSNTVSQVPTVTLNESGPITIAENVEIKEEPIHDAEMVYGTYDEATNCITIIYPEEDTTKLTVPQQQQYNQQLPSPTHSYDSMSPASLHSDDTDMVSVPSSKLDGAHSDCGYESHGSPASSVCGANGALTDLWHESFSELFPSLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

80% Identity
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