Basic Information

Gene Symbol
GATA6
Assembly
GCA_900480025.1
Location
UDEW01002507.1:17289-27438[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.4e-10 1.9e-06 27.8 8.5 1 33 523 554 523 556 0.93
2 2 2.5e-18 8.5e-15 54.5 7.6 1 35 584 617 584 618 0.97

Sequence Information

Coding Sequence
ATGAAGGAAAGTCTGCAGCAGAAGCAGGAGCCAAGCAAGCTGGACTGGGACAACCACCGGCCGGAAGAAGCCTCCCCGCACCAAGCGGCCCACCCCCAAATGGAGGATCCACACCAGCAACAGACTCCCGTGGGCAGTCCGCGCAGCGTGATAACAATGCGACGGCCTGTGCGCACCATCACCACCGCCGGACACATAACCGAGACGCTGGTCGAGCACACGGAGCCAAGTTCGCCTGAGAATGCTCAGAGCGCGGCTGAGATTCAGCAACACATGGTTCAGCAACAGCAGAGTCGGAGTGTCAAGCAGGAGACGCAGGAGCCGCCTCCGCCGTACTCTGATGAGCATCAGCATCAGCATCAGCACCAGCAGCCGCAGTATCACATTCACATATCGCACGAGCACAGTCCTGAGGACCAGAGGGTTGCTGAGCAGAAGCAGCATGTGATATACGCTACGGCCAACGGTCAGGATATACAGGTTGATGGTGCTGAGGGCGCAGAGCCGGGAATGGCTATGGCCGTTGAAGAGCCACCGAGATACGAAACCCCGGCGCCGGACCGCGTCGAGGTGGACCGGGTCACCTACGTCACCTACAGCGACGGCACCGAGCTCAGGCGAGACGTGATCGCAGTTCACGAGCAGCCGCGTCAACCTCAGCAACAGCGCTTCAGTCCGCACGATCCATCTCACCAGCAACAAGCCCAGCAAGCTCGCTATCAAACGTCCCCTGTCTCAGCCCCAGCTGAAAGCTACGAGACGCAAGCCCTGGTACCTCAACAAGCGAGCACTATGCACCTCAGTCCACCTGGACAAAACTACTCACCGCCGCTGGACGTCATCAGGCCTggtcagcagcagcaacagcaacagcagcatcagcaacagcagcagcttGTTGCTACGGCTTACGCTGACGCAAGTGGCAACATTAAGTACCACACGGAAGTCAGCGTCGCTGCTGCTGAGAATTTGAAGGCCTCCAGCACGTACACGACCCTGGAGACGGTGCCTCTGCCGCCGGGCCAGGCGGTGCCTTATACGCAGTATATTACGGCCTCGGAAGCTTTTCAGCAGGCGCCGACTAGTTACAGTTACCCTAAGCACCAGGAGATTTACGTTTACTCGACTTCCGGTCAGGCGGGCAGAGCTGGCGAGATCGAGCACCCGGTAGGCGTGTACATAAAAAGCGACCCCACGCTGACCTCCTCCTCGCTGATGCGACCGGCTCCGGTGCCCTACGAGCAGCCCGCCTCGCCGTCCCAGGTGAACATGTACCAGGGCGGCCCGGTCACCTACCTAACCAAAACCACCAACGAGCAGTACTGGACCAGCGCCGGCGGTCCAGCTTCACCCCCGGCCAACTTCGATTACGTGCCAACCGGCTACGCAGGTGTGCCTACAGCAGCGGCTATCTCAGCTGCCGCAGCGGCCGATGGTAACGGCATGCTGTACACGAGCAGCGCTTACATGTCCAATGGTCCAGGCTCGCCCTGGCCGCCGCTTCAGCTTCCGATAACGGAGGAAGCTATGGACGCCGCGGCTCTAAATAATGAGCCCAAGGAGTGCGTGAGCTGTGGGTCTAGCACGACGCCGTTGTGGAGAAAGGATGGCACGGGGCTGTATTTGTGCAGTACTTGTGGTATATGCTGCAAGGCGAATGGTATGGGCAGGCCACCAGCGCAGAGAGTCAAGCCCAAGACGTCCGCGCCGCCGGTGAGTACTGGTGGTAGGAGGATAGGTGTCAGGTGTGCCAATTGCAGTACCACAACAACCACCCTATGGCGACGAAATAACAACGGCGAACCAGTATGCAACGCTTGCGGATTATACTACAAACTTCACAATGTGAACCGGCCAATGAGTATGAAAAAGGACGGCATCCAGACGAGGAAGAGGAAGCCGAAAAATCACGCCAATGTAAATAACAATCACGGCGTGTCGAATGCAATTCACAAGCCGGAGATCAAGTCCAGCCTACTCGTGGAATCAAAGGTGCAGTTGAGCATGTACGCAAACGGAGGTgttggtggtggtggtggggACGGTGGGGTGGCGGCGGTCGACAATCAGCATTACGTACCGGCAAGCGACGGAGGCGCGCAATTGTCGCTGACTTTACCGTCTTACAGTGCCTCGCACTCGCCCCTAAATTTACCTTCCGCCGCCGCGCTCAATCGTCAGACCACGCTTACcgtgCCACCGTTAGAACCACCCACTAGCCGACTGAACGCAGACCTGACATCGGTGATAACGTCGACATCAACGGCTGTGCACACGACCGAGAGATCCTAA
Protein Sequence
MKESLQQKQEPSKLDWDNHRPEEASPHQAAHPQMEDPHQQQTPVGSPRSVITMRRPVRTITTAGHITETLVEHTEPSSPENAQSAAEIQQHMVQQQQSRSVKQETQEPPPPYSDEHQHQHQHQQPQYHIHISHEHSPEDQRVAEQKQHVIYATANGQDIQVDGAEGAEPGMAMAVEEPPRYETPAPDRVEVDRVTYVTYSDGTELRRDVIAVHEQPRQPQQQRFSPHDPSHQQQAQQARYQTSPVSAPAESYETQALVPQQASTMHLSPPGQNYSPPLDVIRPGQQQQQQQQHQQQQQLVATAYADASGNIKYHTEVSVAAAENLKASSTYTTLETVPLPPGQAVPYTQYITASEAFQQAPTSYSYPKHQEIYVYSTSGQAGRAGEIEHPVGVYIKSDPTLTSSSLMRPAPVPYEQPASPSQVNMYQGGPVTYLTKTTNEQYWTSAGGPASPPANFDYVPTGYAGVPTAAAISAAAAADGNGMLYTSSAYMSNGPGSPWPPLQLPITEEAMDAAALNNEPKECVSCGSSTTPLWRKDGTGLYLCSTCGICCKANGMGRPPAQRVKPKTSAPPVSTGGRRIGVRCANCSTTTTTLWRRNNNGEPVCNACGLYYKLHNVNRPMSMKKDGIQTRKRKPKNHANVNNNHGVSNAIHKPEIKSSLLVESKVQLSMYANGGVGGGGGDGGVAAVDNQHYVPASDGGAQLSLTLPSYSASHSPLNLPSAAALNRQTTLTVPPLEPPTSRLNADLTSVITSTSTAVHTTERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00693455;
90% Identity
iTF_00693455;
80% Identity
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