Basic Information

Insect: Eupelmus annulatus
Gene Symbol: -
Assembly: GCA_900480025.1
Location: UDEW01000818.1:42461-44203[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.0024 0.21 12.5 0.3 7 23 106 122 97 122 0.91

2 6 0.09 8 7.5 1.1 1 23 138 160 138 160 0.95

3 6 4.2e-05 0.0037 18.0 1.5 1 20 175 194 175 197 0.94

4 6 2.7e-05 0.0023 18.7 0.6 2 23 293 314 292 314 0.94

5 6 1.9e-05 0.0017 19.1 6.7 1 23 320 342 320 342 0.99

6 6 0.00013 0.012 16.5 6.4 1 23 348 371 348 371 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.0024	0.21	12.5	0.3	7	23	106	122	97	122	0.91
2	6	0.09	8	7.5	1.1	1	23	138	160	138	160	0.95
3	6	4.2e-05	0.0037	18.0	1.5	1	20	175	194	175	197	0.94
4	6	2.7e-05	0.0023	18.7	0.6	2	23	293	314	292	314	0.94
5	6	1.9e-05	0.0017	19.1	6.7	1	23	320	342	320	342	0.99
6	6	0.00013	0.012	16.5	6.4	1	23	348	371	348	371	0.98

Sequence Information

Coding Sequence: ATGAGTGCAGCAAGCCAAAGTGGTGCGATGTCTTTGGCTAATCCGTCGGCCATTCACTTAGGTCCAATACTGGCACCTGGAAGCAACGAAACTATTTCTATAGTCATTCCTCTCTCAGCTCAACTAGCTACACTGTCTAGGAATGCTGCTattcagcagcagcagcagcaacaacagcaccAGCAGGTGGTTTGCAAGCAAGAGCCTATCGACAACACAGACAAAAAAACATCGCCTAAGCGACCTAAAACTAATCCACCTCGGATAAAAGAGGATAAAACTAAAGgTTGTCCTTATCCAAATTGTAGTAGATACGGCAGAGCCTTTTCAAGAGCACATGACTTGAAGCGTCACATAGCAAGACACGAGTCAAGAGAAAACAAGACATCAGAAGTTCAGCAGCAGCAAATTCATCCATGCTTAGTGTGTGGTGCTcacttttataatgaaatgatTCTACAAAGGCACAAACTAATACATGAGAATGGAACAAATTCTATAACGTCCACAAGTGGACCTCCATATACTtgcaatttttgcaaaaagacCTTTGAGCATGAAAGTCTTCTCAATGCTCATCTACCCATTCATATAAAGAGCGAGCCGTTTTTGGCATTTCAGCACAGCGCTGCGGCTGCGGCCGCAGCCGCGGCGGTCATTCCCTCGGCTTCGCGTTACCAGCCGCCTAACGGGCCTCCACCTCTGCCACTTGCGCCGTCGGCAATGACGACAAGCGCGTCAGCCTCGTCGGTGAACTCAGACGATGACTACCGGCTCGAGGATATGCTCTTGCTGCGCAAGGGTACAAACGGTAGCTCGTCCGGTTCGCAACACAACAAGGCTTCATCGCCGTCTGGCAGCGCTGCCTCCAAGATCCGCTGCGAGTACTGCAGCAAGACCTTTAAGACTAAATGGACGTTAAGCTCGCACGTGGCGGCGCACGAGGGCCGCTTCCAGTACCAGTGCTGCATATGCAGCAAACGCTTCGTCAGGAAAAGCCACTACGAGAGCCACGTCAGATCGCACGATGCGGCTAGACCCTACGTCTGCGAGCACTGCGgTAAAACTTTCAAAGAGAGTAAGCATCGGAGAGAACACTTGAAACGAAAGCACTCTAATAACCGAAATGCCATACAATCGCTCCTCGATAGCATCACCGCTTGCGTCAATGAAGAccctgctgctactgctgcagAGCAAGCCAAACTCACCATACTTATGCCGATGAATTTCAGCACTTAA
Protein Sequence: MSAASQSGAMSLANPSAIHLGPILAPGSNETISIVIPLSAQLATLSRNAAIQQQQQQQQHQQVVCKQEPIDNTDKKTSPKRPKTNPPRIKEDKTKGCPYPNCSRYGRAFSRAHDLKRHIARHESRENKTSEVQQQQIHPCLVCGAHFYNEMILQRHKLIHENGTNSITSTSGPPYTCNFCKKTFEHESLLNAHLPIHIKSEPFLAFQHSAAAAAAAAAVIPSASRYQPPNGPPPLPLAPSAMTTSASASSVNSDDDYRLEDMLLLRKGTNGSSSGSQHNKASSPSGSAASKIRCEYCSKTFKTKWTLSSHVAAHEGRFQYQCCICSKRFVRKSHYESHVRSHDAARPYVCEHCGKTFKESKHRREHLKRKHSNNRNAIQSLLDSITACVNEDPAATAAEQAKLTILMPMNFST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00739372;
90% Identity: iTF_00693282; iTF_00691443;
80% Identity: iTF_00691443;