Basic Information

Gene Symbol
ZNF219
Assembly
GCA_900480025.1
Location
UDEW01005256.1:4553-5452[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 1.9e-05 0.0017 19.1 1.7 2 23 101 122 100 122 0.97
2 7 5.3e-05 0.0047 17.7 3.5 1 23 128 151 128 151 0.97
3 7 4.8e-05 0.0042 17.9 1.6 1 23 157 179 157 179 0.96
4 7 3.7e-06 0.00033 21.4 0.8 1 23 185 207 185 207 0.97
5 7 0.0069 0.61 11.1 3.1 1 23 213 235 213 235 0.98
6 7 8.2e-07 7.2e-05 23.4 1.0 1 23 241 263 241 263 0.97
7 7 1.5e-05 0.0013 19.4 2.5 1 23 269 292 269 292 0.98

Sequence Information

Coding Sequence
ATGAAAAGGAGAGGAGGCCGCGTGgtcaagaaaaaaagtctcAAGAAATCCAGCAAAGTGAAGATCAAATCCGAAAGTCCCAAACAATCCTTAGAAGACCCAGAAATCTCCGCTCTTTCCACAGTCAAAGTTGAATCCACAACCACAGCTATGGACCAAGACGTCGACGACGAAGACGACATCCCCGAGAACAACGATGACGCCAACGACGAAGACTACGAGGTGCCGGTGTCCCCTGAATCTgctaaagcaaaaaaatcacGCAAGAGAAGCAGCAATGCGCCAGCAATGGGCAATCTAGAGTGCACGCAGTGCAATAAGAAGTTCCGCATGTACAATAGCTACCAAATCCACATGAGGGTCCACACCGGCGAGAAGCCCTACACCTGCCACATCTGCGGCAAGCAGTTCGGACAGACGGGTAGTCTTTACTATCATCTGAGGCATGTGCACGGCGGCGTTAAGAATCATGCTTGCGACATTTGCGGACGTTGCTTCGCTATGAAGACGGCCATGGAGGATCATCGACGTATTCACACTGGCGAGCGACCATACATCTGCGACTCCTGCGGCAAGACCTTCAAAACGAAAGCCTCGCTCTACATTCACAGCAAAATCCATACCAACGAGTATCCGTTCAAGTGCAGCTACTGCAAGAAGCTCTTTAGATGGAAGCAGCAGATGATCAGCCACTTGACGACCCACACTGGCGAGAAGAATCACATCTGCGACATTTGCGGAAAAGGATTCGGTGTGAAGAACGAACTGACTAGGCATCGACGTACCCACTCGTCCGACAAACCTTTCACCTGCCAGAAGTGCGGAGTGAGCTTTGGACAGAAGCGTTATCTGACCAACCATAACAGGACGCGACACAAGACCAAAGCTACCGACAATTAA
Protein Sequence
MKRRGGRVVKKKSLKKSSKVKIKSESPKQSLEDPEISALSTVKVESTTTAMDQDVDDEDDIPENNDDANDEDYEVPVSPESAKAKKSRKRSSNAPAMGNLECTQCNKKFRMYNSYQIHMRVHTGEKPYTCHICGKQFGQTGSLYYHLRHVHGGVKNHACDICGRCFAMKTAMEDHRRIHTGERPYICDSCGKTFKTKASLYIHSKIHTNEYPFKCSYCKKLFRWKQQMISHLTTHTGEKNHICDICGKGFGVKNELTRHRRTHSSDKPFTCQKCGVSFGQKRYLTNHNRTRHKTKATDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00692356;
90% Identity
iTF_00691407;
80% Identity
iTF_00691407;