Eann000202.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupelmus annulatus
Gene Symbol
Kr-h1
Assembly
GCA_900480025.1
Location
UDEW01009391.1:2356-3978[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.29 25 6.0 2.6 1 21 56 76 56 77 0.92
2 8 1.5e-06 0.00013 22.6 2.8 1 23 86 108 86 108 0.97
3 8 8e-08 7.1e-06 26.6 1.2 1 23 114 136 114 136 0.99
4 8 2.7e-05 0.0024 18.6 3.8 1 23 142 164 142 164 0.99
5 8 2.2e-07 2e-05 25.2 2.0 1 23 170 192 170 192 0.98
6 8 0.00027 0.024 15.5 4.0 1 23 198 220 198 220 0.98
7 8 2e-05 0.0018 19.0 1.4 1 23 226 248 226 248 0.97
8 8 0.0001 0.0091 16.8 2.0 1 23 254 276 254 276 0.99

Sequence Information

Coding Sequence
ATGGTAGAATTTCAAGTATCTCCTATAATTACTGCAGAGAACAATTATAGCTCGGATGTTTTAGAAACATTTCAGAATTCAAGTCTTCAAAGGTCTATAAAAACTTTGAGTGCTCTTAAAATGACATCCAATGATGCTAACtcttttacaagaaaatataaatcttatcAATGTATCAAGtgtaacaaaacttttaatgaaaaaaacgtatatcaaattcatttatgcaaagtgaaaattaattgtgaTGATTTGCATCATTGTAATATTTGTGGCAAATCATTTTCTGTTCCAGCTAGATTGATAAGGCATTATAGAACTCATACTGGCGAGAAACCTTATCAATgtgaatattgtaataaatcgTTTTCCGTTAAAGAAAATCTCAGTGTTCATCGTCGAATTCATACAAAAGAACGTCCATATAAATGTGATATTTGTAAAAGCGCTTTCGAACATAGCGGTAAACTTCATCGGCATATGAGAATACATACTGGTGAGCGACCACACAAATGTTCGCTCtgtaacaaaacatttattcaaagCGGACAGCTAGTTATTCACATGCGTACTCATACCGGGGAGAAACCTTATATTTGTAAGTCATGTGGAAAAGGATTCACATGTTCAAAACAGCTCAAAGTACACACTCGAACTCATACAGGTGAAAAACCGTACAAGTGTGATATTTGTGGAAAATCATTCGGATATAATCatgttttaaaacttcatcAAGTGTCACAttatggagaaaaattttacaaatgcaCTGTTTGTCAAGAgacatttaattctaaaagatTCATGGAATTACACATAAAATCGCATGCGGaatcatcaataaattttaataaacctcCGAAATTAAATACAACAGTTTATGAAAgaacaaatataaacaaaatgtttacaagagaaaatagaattctaatgattgaaaataaaacggaaaaaattttacagaaaagcataaaaaaattcgaaaatagtaaaatacacAAAGTAAATGACTATCCAAATATTGTTCTTTACAACAATCTCTATGAACAAAATAATCCAATTGATCAAAGGGTACCTTCATTACTTGACGATCAGCAGTATTTAACTATGAATCCAAATTCATTCATTTCAAagcattcaaattttataagtaccCAAGTCAATCATATTCAAGATACAGAAATGCAAAATCAAACACCAACTCATCGAAAATGTATTACTACTTACAATCCTCTCAATTCttgtatgtttaaaataaaagaagatacatatttttctgaaGAATCATTGTCAAGATTTTGTTCATCGAATAACAAGATGAAAGAAACTTTGGAGCCCAATTTGCCACTAATTGAGGAACTAGAAACAGAAACAAATACAGAACTTAATTACCATGAAAGTTATAGCACAGCTCATAGTAACTcagtcaatttaaaattaaatacaaattctttAAGTATGATGATGtcaaaagtaaaagataaTCTTAGCTTACCTCCTCGCAAAAggtgtaagaaaattttagaattaatggAAACTGAAAAATCCGACATGAGAGttacaaaaagatttaattctgttataaaatttgcgaaattaaattctaatttaactGATAAGTAG
Protein Sequence
MVEFQVSPIITAENNYSSDVLETFQNSSLQRSIKTLSALKMTSNDANSFTRKYKSYQCIKCNKTFNEKNVYQIHLCKVKINCDDLHHCNICGKSFSVPARLIRHYRTHTGEKPYQCEYCNKSFSVKENLSVHRRIHTKERPYKCDICKSAFEHSGKLHRHMRIHTGERPHKCSLCNKTFIQSGQLVIHMRTHTGEKPYICKSCGKGFTCSKQLKVHTRTHTGEKPYKCDICGKSFGYNHVLKLHQVSHYGEKFYKCTVCQETFNSKRFMELHIKSHAESSINFNKPPKLNTTVYERTNINKMFTRENRILMIENKTEKILQKSIKKFENSKIHKVNDYPNIVLYNNLYEQNNPIDQRVPSLLDDQQYLTMNPNSFISKHSNFISTQVNHIQDTEMQNQTPTHRKCITTYNPLNSCMFKIKEDTYFSEESLSRFCSSNNKMKETLEPNLPLIEELETETNTELNYHESYSTAHSNSVNLKLNTNSLSMMMSKVKDNLSLPPRKRCKKILELMETEKSDMRVTKRFNSVIKFAKLNSNLTDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00693246;
90% Identity
iTF_00693246;
80% Identity
-