Basic Information

Insect: Eupelmus annulatus
Gene Symbol: -
Assembly: GCA_900480025.1
Location: UDEW01004149.1:11150-14280[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.017 1.5 9.9 0.4 3 21 8 27 6 28 0.85

2 14 1.5 1.3e+02 3.7 0.0 2 20 34 52 33 53 0.92

3 14 0.12 10 7.2 0.1 1 12 231 242 231 245 0.93

4 14 0.084 7.4 7.6 0.7 1 20 373 392 373 394 0.94

5 14 6.3e-05 0.0055 17.5 0.3 2 23 399 420 399 420 0.97

6 14 0.033 2.9 8.9 2.4 1 23 431 453 431 453 0.95

7 14 1.3 1.2e+02 3.9 0.1 1 23 472 493 472 493 0.77

8 14 0.0012 0.1 13.5 0.0 2 23 499 520 498 520 0.95

9 14 5.8e-05 0.0051 17.6 4.8 1 23 588 610 588 610 0.99

10 14 7.1e-06 0.00062 20.5 5.0 1 23 616 638 616 638 0.98

11 14 0.00015 0.014 16.3 4.6 1 23 644 666 644 666 0.98

12 14 1.8e-06 0.00016 22.4 0.8 1 23 672 694 672 694 0.98

13 14 0.00011 0.0098 16.7 0.2 1 23 698 720 698 720 0.99

14 14 0.00023 0.021 15.7 0.1 1 23 728 750 728 750 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.017	1.5	9.9	0.4	3	21	8	27	6	28	0.85
2	14	1.5	1.3e+02	3.7	0.0	2	20	34	52	33	53	0.92
3	14	0.12	10	7.2	0.1	1	12	231	242	231	245	0.93
4	14	0.084	7.4	7.6	0.7	1	20	373	392	373	394	0.94
5	14	6.3e-05	0.0055	17.5	0.3	2	23	399	420	399	420	0.97
6	14	0.033	2.9	8.9	2.4	1	23	431	453	431	453	0.95
7	14	1.3	1.2e+02	3.9	0.1	1	23	472	493	472	493	0.77
8	14	0.0012	0.1	13.5	0.0	2	23	499	520	498	520	0.95
9	14	5.8e-05	0.0051	17.6	4.8	1	23	588	610	588	610	0.99
10	14	7.1e-06	0.00062	20.5	5.0	1	23	616	638	616	638	0.98
11	14	0.00015	0.014	16.3	4.6	1	23	644	666	644	666	0.98
12	14	1.8e-06	0.00016	22.4	0.8	1	23	672	694	672	694	0.98
13	14	0.00011	0.0098	16.7	0.2	1	23	698	720	698	720	0.99
14	14	0.00023	0.021	15.7	0.1	1	23	728	750	728	750	0.97

Sequence Information

Coding Sequence: ATGGGTTCGATAAGCCTGATGTGTCCAATGTGCTGCGGAGAGACTTTCAACAACTCCGAGTCTCTCAAGTACCATTTGTTGAGCATGACGGATAATTTGTACTGCCCTGGATGCTCGTTGAGGACCTACTCGGTGGCTGCTTTGATACAGCATTTAGACTGCTGCGGAAAAGAAATGGAGCAGGAGGAGCAGCCAAGGGATACAGAGATAAATACCAATGATTTGGTAGCAGGTGATACTGACAGAGATGAATCGGATATATTAATGGGTGATAATGACGATGGGATTAATGACAGCTTCTTAGCGACTGTCAATGATGAAGGAATTATGATTGTTGGTGAAGGTAGAACTATACAAGTAGATGAAAATGGGGACATACAAGTTGTAGGAAAAGCGCATTCCATAACTGAGGAACAATCCTTACCTCTTGTAAATGGTGATAAAGATATGATGAATGAGTCAGAAGAGCCAAAAGAAGTTAATGAAGCTTCGGTTATGTTAGAAGAAAACTCAATACTTAATTCAAAAGGGGAAGATGTTATATCAAGTATGTCTGATACAgctgaattattaaatgaaaatactacATTAATTAGTATGGCACAAGTTGATCTAAAGTTGGATGACatacttacaattaaaaaagaatcaagcCAAGAAACAGAAAATGATCAGgATACAGAGATAATGTATAGTTGCAGTACATGTGGAATGAGTTTTACTTCTGTATTAGAGCATATAAAGGAATATCATGATGGTCAAGAAGTTGTTTTGGAAATGGCTGAACAACAAATGGATGAATTAGAAACAACACAATCAATTCTTCCAACTTCTGAAGTTTCTATTGAACCTCCAGTAAGTACTTCAACTAGTACTGTACAAACAACTACAGCTCCAACAAAACAAAGACAGTCAATGAATACCTTGAGAACAGAAGAATGTATTGATAGTGATGGCAGATTATATACAAGAAAAGTTGTACAAATTGAAAGGTTTTGGGACCGAACTCCTGTTACTCTTTCCACCACCAAAGCTCcaatgattgaaaaatttttttccaatgttGAAGGAGTCAAGGTTAGAGATAAAAGTGTAACCGTTGCTCCAACGAGAATGTATAGGTGCAATCAGTGTTTAGAACAGTTCGCTAAGTTAGGTGATTTTCGCGTTCACGTGTGCCTTCAAGGAAATAATCGATGCGATCAGTGCGATCAAACGTTCGCGACGGCAAAAGCATTGCAGACGCACGCGAAAGTGCACGAAAACAGTGATTTCCCttcgcaaaaaatatttttatgcactGTCTGCGGCACAGAATTCCTGACGCACAAGAGTCTACGACTGCACTCGAGGATGCATGCCCCAGTCAGGGCGCGACATGTCGACGCGCCTGAAGGAACGGAAGAAGAAACTTTCGTATGCGCCGAATGTGGTACGACGCTCTCAGAATCCTATCGGGGGGCACACATGGCCCTGCATGCCGGAGACTCGATCACTTGCACGGTCTGCAATCGCAAGTTCGACTCAGCCGAGAGCCTGGCGATGCATGCGGCTGTTCACATGGAGGTGAATGCTAGTCCAAGCTCCAGCACCGCGACAGCAGTTAACGATCTTGTACTCGCCGCTGTCTCCTCTGGCATGGCCAACTCCCAAGATCCTTCCGAACCGGAGTTCATTAGCACTGGCACAACAATGTCTTCGAGCACTGCTACGTCTACGTCGGCGACCGCTGATTCGGCCGAAGTCCAGAATCAGAAGCCTTACCAGTGTCAGCACTGCGGACGAAGGTTCACCAGGCCTCATGAGAAAGTCAAGCATGAGAGAATACACACCGGTGAAAAGCCGCATTCTTGCGAGGTCTGTGGTAAGAAGTTCCGTGTCTCATACTGCTTGACGCTACACATGCGAACGCATACGGGAGTGCGACCGTACGAGTGTCAACATTGCGGCAAGCGCTTCAAAGCTTCCTCTGTTTATAATCACCACCTCCTGACCCATGGCGAGGAGCGCGCTTACACCTGTCCGTATTGCCCAAAGACCTTTAAAACTAGGGTACAGCTGGCTGGCCACAAGAACAGTCATACCAAGCCGTTCCGTTGCACCGAGTGTTCCAGGCCATTTGCCTCGCTCTATGCCGCGCGCGCCCACATCCAAACCCACAAAAAAGACAATAACCTCAAGTTCAGCTGTAATATTTGCGGTGCGTCGTATGGCAGGGCTTTCGCCCTCAAAGATCATGTGAAGCAGCATGAGCGAGAAAACGTAGTGATGCCGCCCGAGCCCGCCCGAGAAGAAGAAGTCCAGGTCGATAGTTTCCTGCTGCAGGatgacgacgacgaggaggaaCTCATCGTGCCTTCGCCACCGCCCAACTGTGATCCCATTCAGACGGAACTTGATGACGAGCAGTTTAAGGAGTAG
Protein Sequence: MGSISLMCPMCCGETFNNSESLKYHLLSMTDNLYCPGCSLRTYSVAALIQHLDCCGKEMEQEEQPRDTEINTNDLVAGDTDRDESDILMGDNDDGINDSFLATVNDEGIMIVGEGRTIQVDENGDIQVVGKAHSITEEQSLPLVNGDKDMMNESEEPKEVNEASVMLEENSILNSKGEDVISSMSDTAELLNENTTLISMAQVDLKLDDILTIKKESSQETENDQDTEIMYSCSTCGMSFTSVLEHIKEYHDGQEVVLEMAEQQMDELETTQSILPTSEVSIEPPVSTSTSTVQTTTAPTKQRQSMNTLRTEECIDSDGRLYTRKVVQIERFWDRTPVTLSTTKAPMIEKFFSNVEGVKVRDKSVTVAPTRMYRCNQCLEQFAKLGDFRVHVCLQGNNRCDQCDQTFATAKALQTHAKVHENSDFPSQKIFLCTVCGTEFLTHKSLRLHSRMHAPVRARHVDAPEGTEEETFVCAECGTTLSESYRGAHMALHAGDSITCTVCNRKFDSAESLAMHAAVHMEVNASPSSSTATAVNDLVLAAVSSGMANSQDPSEPEFISTGTTMSSSTATSTSATADSAEVQNQKPYQCQHCGRRFTRPHEKVKHERIHTGEKPHSCEVCGKKFRVSYCLTLHMRTHTGVRPYECQHCGKRFKASSVYNHHLLTHGEERAYTCPYCPKTFKTRVQLAGHKNSHTKPFRCTECSRPFASLYAARAHIQTHKKDNNLKFSCNICGASYGRAFALKDHVKQHERENVVMPPEPAREEEVQVDSFLLQDDDDEEELIVPSPPPNCDPIQTELDDEQFKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00693232;
90% Identity: iTF_00693232;
80% Identity: -