Eann010298.1
Basic Information
- Insect
- Eupelmus annulatus
- Gene Symbol
- -
- Assembly
- GCA_900480025.1
- Location
- UDEW01001137.1:10216-11745[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7e-09 8.3e-06 25.8 0.0 3 38 57 92 55 95 0.90 2 2 2.9 2.5e+03 -1.3 0.0 30 40 434 444 432 447 0.83
Sequence Information
- Coding Sequence
- atggttaAGACAAGAGAAAtccactttaaaaataaagttagcCCTAATGGAGAAAggaaaatgaaacaaaaaaatgtttgtacagataaaaatagagtaacaataaaaattaaattgaataaatcagGATTCATTAGAAAAGAAAGGAAGGAAAAACAGTATAGTACtgataacattaaaaaagctCTTGATGCAGTTGGTAAAGGACAATCTTTAAGAGAGGCAGCTCATAATTTTGGAGTTCCTAAAAGCAcagtgtataataaattaaaaaatttaacacctattgattgtaaaaaaggTCCACCATCTGTGCTTAgtaaaaatgaagaagatgAAATAGTGGAATGgcttatgtatttattagaaaaaggtTTTCTTGTGAcaaaaagtcaattattcgATTGCGTACAAGactttttgattgaaaaaaaaaaaaaaaacccattcAAAGATAACAGACCTGGTAAGCACTGGTTGATTGCCTTTATGAAGAGGCATAAGagtttaaatggaaaaattgacCAAAGTTTCAATTCCATCAGTGAACCAGCCAGTGAAGAAAATCTTAGACAATGGTTCTGCCaagtaaaactttattttaaaaagaaaaatttattatcattaacaCCAGACAGAATATTCAATCTTGATGGATCatcttttatgtttattccaaaagataattttatcatagCGGATAAAGAATCAAGATCTATTTATCAAATTCcagcaaaaaataagaaagatgTCATAACTATTCTGTTCAGCGCTGCTGCTTCAGGAGAAATGTCTCTGCCAATGATTCTTTATGATTTGAAATTGGCAGCTAGAAAAGATGTGTTAGTTAATATGCCTGAAGGGTGGGAACATGAATACACAGAACATGGGAGTCtaacttcaaaaagtttttatagttatatcactaaatttttctttaaatggcTTCAAGTCAAACAAATAGTATTTccaattgttttatatatggATGGTTGTTGCCCTTACCTCAGTTTGCCTTTAGTCAAATTTTGccaagaaaatcaaatagaaCTGATGGCATTGTACTCAAatgctataaatataattcaaccattaaatatggatttttttcaacCACTAAAAGAGTCATATGAGCAAATCCTTTGTCAGTggaaaatagataataacatacaaactttaaaaaaatctatgtttGCACAAgtgttaaaattaactttagaAAATCTTGATTTGTCAACAAGTATTGTCAATAGGTTTAAAGTTTGTGGACTCTTTCCATTTGATGAAAATGCTATTGACTATAATACTTTGaagaatcataaaaagaaaacaaatgttttaaattcctctgatgaaaatgaaataagcaatgataatttaaaattttttaatttttttgaaaatgaaatactttCTCCCAGTGTTTTAGAAGCATTCAAACAAGATGAATTCAAAGAATCTTGGAGTGGTGACATCAGTCAACAAGGACTTTTTGAATCttggagaaaattaaaaaagcttttactttaa
- Protein Sequence
- MVKTREIHFKNKVSPNGERKMKQKNVCTDKNRVTIKIKLNKSGFIRKERKEKQYSTDNIKKALDAVGKGQSLREAAHNFGVPKSTVYNKLKNLTPIDCKKGPPSVLSKNEEDEIVEWLMYLLEKGFLVTKSQLFDCVQDFLIEKKKKNPFKDNRPGKHWLIAFMKRHKSLNGKIDQSFNSISEPASEENLRQWFCQVKLYFKKKNLLSLTPDRIFNLDGSSFMFIPKDNFIIADKESRSIYQIPAKNKKDVITILFSAAASGEMSLPMILYDLKLAARKDVLVNMPEGWEHEYTEHGSLTSKSFYSYITKFFFKWLQVKQIVFPIVLYMDGCCPYLSLPLVKFCQENQIELMALYSNAINIIQPLNMDFFQPLKESYEQILCQWKIDNNIQTLKKSMFAQVLKLTLENLDLSTSIVNRFKVCGLFPFDENAIDYNTLKNHKKKTNVLNSSDENEISNDNLKFFNFFENEILSPSVLEAFKQDEFKESWSGDISQQGLFESWRKLKKLLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00692835;
- 90% Identity
- -
- 80% Identity
- -