Eann006879.1
Basic Information
- Insect
- Eupelmus annulatus
- Gene Symbol
- clz9
- Assembly
- GCA_900480025.1
- Location
- UDEW01019077.1:763-2239[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-09 2.9e-06 27.3 0.0 3 35 31 62 29 69 0.91 2 2 6.6 5.7e+03 -2.5 0.0 27 36 218 227 218 230 0.84
Sequence Information
- Coding Sequence
- atgaagaaaagaaaaatcaatgtgACAaacttaagaaatattaatgagaaaattgaaaaagtaaaaattaaaagaaagaactACAGATCTGAAGCAATCGAGGAAGCTAAAAAAGCAGTTAGTGAAGGTATTTCTCTTAGAAAAGctggaaaaatatatgatatacCCTTAGCTACACtttgtagaaaattgaaatatccagagacgaataataaaaaaagtggacCTTCTACAGTTTTAAACAatgaagaagagaaagagatagtgAAATGGGTGCTCTATAGAGCTGAAACAGGCTCTCCTGTAACCAAAGAATCCAAACATACATATCTAAATATAAGCGTAAGAGCTGCTCAAAATCTTTCTCTTATGAGAGCTAGTGTTACAGAAGAGAAATTAAGATCCTGGTTTGGTGAGATAGAAATGTACTTAAATgaaacaaacttaaaaaatattcatccatcaagaattttcaattgcgATGAGTCGAACATTCAGATGCATCCTAATCCTGACAAAGTGTTAGCAGAAAAAGCGGCATGTACAGTTCATAACGTTATAGATGCTCCAGAAAGAGAAGGTATGACAgttctttttatgtataatgtaGAAGGTACTAGAGCACCCCCGatgcttttatataattacaaagaagttccaaaaaatgtattgcaaaATTGTCCAAGTGGTTGTGGAATCGGCTTATCAGAAACTGGATGGATGAATACCGAAACTTTTTATGAGTATATGACTCGAGTATTTCATCCCTGgctaattaaagaaaaaatagaactgCCAGTTTTAATCTATTTGGATCTACATGCATCGCATGTAACTCTGCCACTAGTATCTTTCTGCCGAGAGCATAAGATTGAATTAATCACACTTTTTCCTCATTCGACGCACATTATACAACCTCTGGATATAGCTTTTTTCCATCCACTTAAAGATGTTTATAGAAAGAAAGCAGTTCCTCtatggaaaaatgaaaacaacaataggcgaatgaaaaaaaaagatattcctAGAGCTTTggaaataactttaaaattatttaaagaagagAAAACTGTTGTTGTTAATGGTTTTAAATCTGCCAGATTATATCCGTTTAATCCTGATATTGTAGAttacaatgttttaaataagacAATTTTATCGCCTGAATTATTagatcaatttaaaaagtgtgaATTGAATGAGGTTTGGGATGGCTCTATACAGTTTGAAGGAATATTTGACtactgtttaaatttaaagaaacaaattcctggtattatatgtttttatttagctgattga
- Protein Sequence
- MKKRKINVTNLRNINEKIEKVKIKRKNYRSEAIEEAKKAVSEGISLRKAGKIYDIPLATLCRKLKYPETNNKKSGPSTVLNNEEEKEIVKWVLYRAETGSPVTKESKHTYLNISVRAAQNLSLMRASVTEEKLRSWFGEIEMYLNETNLKNIHPSRIFNCDESNIQMHPNPDKVLAEKAACTVHNVIDAPEREGMTVLFMYNVEGTRAPPMLLYNYKEVPKNVLQNCPSGCGIGLSETGWMNTETFYEYMTRVFHPWLIKEKIELPVLIYLDLHASHVTLPLVSFCREHKIELITLFPHSTHIIQPLDIAFFHPLKDVYRKKAVPLWKNENNNRRMKKKDIPRALEITLKLFKEEKTVVVNGFKSARLYPFNPDIVDYNVLNKTILSPELLDQFKKCELNEVWDGSIQFEGIFDYCLNLKKQIPGIICFYLAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -