Eann008076.1
Basic Information
- Insect
- Eupelmus annulatus
- Gene Symbol
- lov
- Assembly
- GCA_900480025.1
- Location
- UDEW01002428.1:12820-15204[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.9e-05 0.042 14.0 0.0 1 37 211 247 211 254 0.88 2 4 4e-11 3.4e-08 33.5 0.0 8 39 268 298 261 302 0.91 3 4 5.3e-05 0.046 13.9 0.0 6 34 318 345 315 350 0.91 4 4 1.4e-10 1.2e-07 31.7 0.0 4 37 376 409 373 414 0.92
Sequence Information
- Coding Sequence
- ATGTCAGAGTCCTCGCCGACGGCCCAGCAGGCGGACACGTCCTACTGCTTCAAATGGAGCAACTACCAGGGTCACCTCTCCGAGGTCGTGCGTCAACTCCTCGACGAAGAGTGCATGGTCGATGTGACGCTTTACTCGCAGGGCGAACGTATCCAAGCCCACCGGCTTGTTCTCTGTGCCTGCAGCACTCTTTTTCAGgaaATTCTCAGCCAGGTTAATGATGAACATCCAACCATTATTCTGAGCGATATATCACCACAAGATGTAAGGTCAATTGTAGAGTTCAGTTACAATGGAGAAGTTAGAATACCTGTTgaaaacatcaataatttattagatgcagcacattctttgaaaatatgtgGTTTGATGGAAattGAAGGACTTGATGAAACTGAAATACCAAATGATAAGGATGACATTGAAGAAACATATATACTTAACGAAGTACCACCAAGTAATAATGATGATTATCtggattttgaagaaaaaaccaataatgaaaaatctccAGAgtcaaaaagaagaagaaagaaagattcAGACGATGATTTTGATTTCACAAgtccctttaaaaaaaataatggaaagaTGAAAAGGCAAAGAAAAAGTGTgtgtaaaaaagaatacacAGATGAAATGTTTAATCAAGCTATTGAAGATATAAAAGCTGGAAAATCACTATTAGAGGCTGCTGCTCAGAATCAAATTCCTAGATCTACACTTTATATGCGTGCAAAAATATTGGGAGTACATTTGAATCCTATTAGAAATGAGTATACTTATGAAGATGTGAAAGGAGCTATAGAAGCAGTATGCgATGGAGCTAGTTTGCAACAAGCAGCAGATTGTTATGGAATTCCAAAAACAGTCTTGTGGAGGAGAATTCAAAAAGCAGGTATTACAACTCCTAGAcgagaaacaagaaaaaattatgccTGTGAAAAGAGAGAAGCTGCTGTAAAAGCATTAGCGAAAGGAGAGTCTCTCACAAAAGTTGCAAATGAATACCAGATTCcaaaaacaacattatttcgagataaagtaaaattggTAGATCAAGGAAAATTACCAGGATCATTTTGGAAAAAGCGTAAAACTGATActgaagaggaaaaaagatcTCGTCTAGAAGAAGCCGTATCAGCATGCAAAGATGGTAAAATGTCTCAAGCATTGGCATCTTCAACTTATCAAGTACCTAAAACAACAATATGGAGACGTCTTCATcaagatgagaaaaaaatagttccATCACCACTTcccaagaaaaaagaatcaaaagttGTTGAATCGCCTATTAAAACGAAAACGGTGGATGTAAAAGCGGAAGAGTTAAATGAAGGCGATTTTGAAGCTTATTGCCCAGATGAATCAGAAATGAGTATAACATATATTGATGAAAGTAATATGACAGATGATCCAGTTATAATTTTGGCTAGTGGAGATGTAGACAATCTAAATTTACCAAATAGATCTTTAGTAGTTGTGCAGAATGATGGTAATGATGAGAACTTTATTTCCTGTGGACTGGAAGAATTAGATGAAAATTCAGCATTTGAATCAAAGAGTTAA
- Protein Sequence
- MSESSPTAQQADTSYCFKWSNYQGHLSEVVRQLLDEECMVDVTLYSQGERIQAHRLVLCACSTLFQEILSQVNDEHPTIILSDISPQDVRSIVEFSYNGEVRIPVENINNLLDAAHSLKICGLMEIEGLDETEIPNDKDDIEETYILNEVPPSNNDDYLDFEEKTNNEKSPESKRRRKKDSDDDFDFTSPFKKNNGKMKRQRKSVCKKEYTDEMFNQAIEDIKAGKSLLEAAAQNQIPRSTLYMRAKILGVHLNPIRNEYTYEDVKGAIEAVCDGASLQQAADCYGIPKTVLWRRIQKAGITTPRRETRKNYACEKREAAVKALAKGESLTKVANEYQIPKTTLFRDKVKLVDQGKLPGSFWKKRKTDTEEEKRSRLEEAVSACKDGKMSQALASSTYQVPKTTIWRRLHQDEKKIVPSPLPKKKESKVVESPIKTKTVDVKAEELNEGDFEAYCPDESEMSITYIDESNMTDDPVIILASGDVDNLNLPNRSLVVVQNDGNDENFISCGLEELDENSAFESKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00693104;
- 90% Identity
- iTF_00693104;
- 80% Identity
- iTF_00690402; iTF_00691002; iTF_00691261;