Ejap042787.1
Basic Information
- Insect
- Eumeta japonica
- Gene Symbol
- GATA-B
- Assembly
- GCA_005406025.1
- Location
- BGZK01001317.1:61461-70868[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 8.1e-14 52.7 3.9 1 34 276 308 276 310 0.97 2 2 4.6e-19 3.2e-15 57.2 6.3 1 34 346 378 346 380 0.97
Sequence Information
- Coding Sequence
- atggtattattttttgtgcGACGCGGGTCGCGGCCGCGGGTCGGCGCCGATAACggcccgccgcccccgccccgccgcccgccgcccgccgcgcacCGCCGCGCCGTCGTCGCGCTCATAACAAGCCGCGCATCGCCGCAGTCGGTTGGGAAACTATCCGGTACTTTATTACGTGGGGAGGCGTGCGCCCGCGACGGCGACGCGCGAGGGCCCGCCGCGCACTCGGCCCGGCCATCGTTTAAAAAGCACATGGACGAAGGCGGCCGAGGTCCGGCGCGACCGCCCCCGCCCCTGCTGCTAGCGACCCCCATACATGCCTACCTCCCTGATATCAAAGAGCCGCGAATAGTTGATCTTTCGGGACACGAATTAAACAGGGGCATTAAAATCGCATTCCGTAAACGGGCCGGTGGAACAGCGCGGCGCGTGCGCGCCGGCGGCATCTCTGCCTCCTTTGTTTCCGATCGAGACCTTTCGAAGGGGATGTATTACTTTGGTCATAAAAGAATGGACAAAAGAAATCTTGATACGAGGTCCTCTCTGGGCCCGCACGAGACAGGACGCCGCGCCGCCGGTGGCTGCCGAGtgcttttgaaattaaaagcttcTAGGATGCAATCCTCGGGCGACGACACTACGCCGCGACGTGACGCTGCGGACGCTCGCACACACACACTGAGGCACTCGCTactcgccgcccgccgcccgcgcgccgcctctgcgccggcgccgggcgACGGGCTGCGGGTACCGGCCGGAGCTATGACTCACGGGGGCCTATCGTGCACAGTCGAAGTGGCGGAGTTTTTCACGGAGGGCCGAGAGTGCGTGAACTGCGGTGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGGTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGGCACGCGGCGAACGCGCTCCCCGCCGCGCACCATGACTTGGGCAGCAAACGACCGGGCATGTCTTGCAGCAACTGCCACACCACTACCACTTCACTGTGGCGTCGGAACGCGCACGGTGAAACCGTCTGTAACGCGTGCGGGCTTTATTACAAGTTGCATTCCATTAACAGACCACTCACCATGAAAAAAGATGCGATTCAGaCTCGAAAACGAAAGCCGAAAAACAGTATGAAGACGGAACGAAACAGTTCAGCCAAGACGCAAGCGGCCCAGGCGACGCACGCGCAGCACGGCCTCGCCACTCCCCTTAAGATCGAAAGTCTACTGAACGAGACAGGAGTGTGCAGCGGGcggacggcgcgcgcgcgctcgcGCTCGCGGTCGCCGCTGCCCGTGCTGGCGTACTACCGCGCCGAGGCGGGCCCCGAGCCGCCGCGCTCGCGGTCGCGCTCTCCACTACCGTCCCTCGGCTACTACGCGGGCCCCGGGAATGCGGAGGAAGCGCTACCGCTGACCGCGCACGTCCATTACGACGACGTGTACCGCGGGGCGACGGCGCCACCTGCGCCGGCGCCCACGCAGCACGCGCACAAGCCCACGCGCGACCATGAACGGCCCACTGTCGTGTCGCTAGGCAGTTGA
- Protein Sequence
- MVLFFVRRGSRPRVGADNGPPPPPRRPPPAAHRRAVVALITSRASPQSVGKLSGTLLRGEACARDGDARGPAAHSARPSFKKHMDEGGRGPARPPPPLLLATPIHAYLPDIKEPRIVDLSGHELNRGIKIAFRKRAGGTARRVRAGGISASFVSDRDLSKGMYYFGHKRMDKRNLDTRSSLGPHETGRRAAGGCRVLLKLKASRMQSSGDDTTPRRDAADARTHTLRHSLLAARRPRAASAPAPGDGLRVPAGAMTHGGLSCTVEVAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLVKQPRRLVRQRHAANALPAAHHDLGSKRPGMSCSNCHTTTTSLWRRNAHGETVCNACGLYYKLHSINRPLTMKKDAIQTRKRKPKNSMKTERNSSAKTQAAQATHAQHGLATPLKIESLLNETGVCSGRTARARSRSRSPLPVLAYYRAEAGPEPPRSRSRSPLPSLGYYAGPGNAEEALPLTAHVHYDDVYRGATAPPAPAPTQHAHKPTRDHERPTVVSLGS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -