Ejap050599.1
Basic Information
- Insect
- Eumeta japonica
- Gene Symbol
- -
- Assembly
- GCA_005406025.1
- Location
- BGZK01002044.1:55059-62610[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.00046 0.1 14.8 4.9 1 23 137 159 137 159 0.98 2 29 0.00034 0.076 15.2 0.3 2 21 196 215 195 216 0.93 3 29 0.0013 0.29 13.4 0.1 2 23 246 268 245 268 0.96 4 29 0.079 18 7.8 2.4 1 23 321 344 321 344 0.94 5 29 0.0011 0.24 13.7 0.3 1 23 365 387 365 387 0.96 6 29 4.9e-05 0.011 17.9 1.1 2 23 425 447 424 447 0.96 7 29 0.00087 0.2 13.9 4.0 2 23 486 508 486 508 0.97 8 29 0.012 2.7 10.3 2.1 1 23 558 581 558 581 0.97 9 29 0.0065 1.5 11.2 0.7 1 23 639 661 639 661 0.96 10 29 0.0046 1 11.7 7.4 1 23 672 694 672 694 0.98 11 29 0.078 17 7.8 2.7 2 23 706 727 705 727 0.96 12 29 0.0045 1 11.7 1.1 1 23 737 759 737 759 0.98 13 29 0.12 27 7.2 7.0 1 23 786 808 786 808 0.95 14 29 0.0012 0.27 13.5 2.1 1 23 819 841 819 841 0.99 15 29 1.6e-05 0.0037 19.4 0.8 1 23 849 871 849 871 0.98 16 29 0.15 34 6.9 0.1 2 23 891 913 890 913 0.97 17 29 0.51 1.2e+02 5.2 1.1 1 23 931 953 931 953 0.94 18 29 0.6 1.3e+02 5.0 2.2 2 23 961 982 960 982 0.95 19 29 0.0011 0.26 13.6 0.8 2 23 993 1015 992 1015 0.95 20 29 0.0044 0.98 11.7 0.2 2 23 1038 1059 1037 1059 0.95 21 29 2.1 4.8e+02 3.3 6.2 2 23 1102 1124 1101 1124 0.97 22 29 0.0021 0.47 12.7 0.2 2 23 1140 1161 1139 1161 0.95 23 29 1.4 3.1e+02 3.9 4.2 5 23 1171 1189 1168 1189 0.94 24 29 0.0099 2.2 10.6 0.8 2 23 1200 1222 1199 1222 0.95 25 29 0.39 88 5.6 6.9 2 23 1239 1257 1239 1257 0.96 26 29 2.9 6.5e+02 2.9 3.3 2 22 1261 1281 1261 1281 0.94 27 29 2.5 5.7e+02 3.0 0.4 2 23 1329 1350 1328 1350 0.93 28 29 0.0019 0.43 12.8 0.9 2 23 1361 1383 1360 1383 0.95 29 29 0.4 90 5.6 2.0 2 19 1421 1438 1420 1438 0.95
Sequence Information
- Coding Sequence
- ATGGCTAAACTGTCGGATAATTCATCAGCACAATGCCCTAAAAAAAGCTTAGATGCAGGATTCAATGTTCCATCCCCACACAACAGACAAAGTAGTGATTCAGGATTTTCAAACAGAACTGATTtatcaaatcaaacaaaaccCTTATCATCTAGTGAGGAGAAATTCACTCCACTATTAAAAAGGAGCACGAGAAAGAGAAGCAGAGAAAGCGATGACAGTAATTCAGTGAGCAGTAGATTTCGAGATACTCctaaatataaggaaaatccAAGATCTCGTGTCAACGAACTGAAGAGTACAGAAAAGCGGAGAAGATTAGAATCGGATAATACATCTACAAAGGAGTCTGATTATGAAGATAATAGCATTTCTCAATACACCACCGATTCGGATGAACCTCTCCTGCATAAATGCGAGACTTGCGGCAAACAATTTGAATCGAAACACAGTTTGGGTCAACACAAACGTGTACATTCACGGGTTAAAAAGACCAACGAAAGCAATAACAGTAGTCTTGGCGAAAATGCGGTAGTCAATATTCCTGCCAATAATACTGAAGATGATAAGGAAGAAGAGAAACTTTCTTGTCCTAAATGTGGAAAAATGTTCAAACTGAAAATCATGTTCAACAGGCATTTACAAGTTTGCGATTCGAGTTCGCTTGAAAATAGTGCGTCACAGCAAAAAGAGCTCAaagtttctttacaaaatttaaaccctgagaaaaaaatagaatgcaGCATGTGTGGTGGTAATTTTAAAGCTATCGAAAACCTAGAGAAGCACATGAAGATGGTACATTCTGCTGTGCTCAAAGATTCCGAAAGACCACAGACTGTAGACAAAGAATCGGGGAAGGTCTTTGTACCTTGTATTTTTTGCCATAAACCATTTGAAGACTACTATATTCATGCTGTTCATTTCAATTCTTGTACACAGAGATCAATTGTGTCAACTTTCTCATGTTTGGTTTGCAACAGCCGTTACAGTTCAAAGAAGGCTTACTTCAAGCAtcttaatgattttcatttttctatcaAGAAAGAGGGGAAAGCGAGAGCGTCCGGTGAAAAAACGGACACTGAGTCGTTTCAATGTCGTTTATGTAGCAAAAATCTATCTACACAAGACcaattaattacacatttaGCGGCACATATGTCCAATATCGATGATGGCTCTGCAGTTTCAACTGCAGAAGATGAATCCagGGGGAGCACTCAGGAAGACTCAATATCAATGCATTCAGAAAAAAGTAGTGGTCCGTCTAAATGTCAATATTGTGATAAAGTGTTTACTTATGGGAAGAGTTTAACAAACCATATCCTAATGAAACATTCGCAAGTTGAAGTCGAGTTGAAGAATGAACCGCCCGATACTTCTACAGTCGTTGCTAAGAATGAAGAAGAGCCTCAAGAATCCGAAGAATCTACAGAGGATGAAGATGACAATACTTGTGACATATGCGAAAAGCATTTCTCATACAAACGACTTTTgattcaacataaaaaaacaaagcacAACATAAGCTCTGGTACGAAAAGGGCTAATTTCACTTTGAAGGACTGCTCCGTCAAATGTTTGATATGTGATATTACAATGAAAGTCAGTGAGATAAATGTACACAATCAACAACATCtgtcaaataatatgaaaccGAGAAACTTGTATACATGCTTTGAATGCGAAGACACATTCAAAAGTTGTCAAGGCTTGCAGAACCATATCAAACTGGTACACAGACTGAAAAGGCAAGTCACAAAGAAGTTTCAAGTGGCTGATCTGGCGGATTTTTGTGAAGTCGTTGTGACGAAGACGGAACCCCTGGATACATTCCAGAGTCACAACGACTTTGGGGAGGTTCCGGGGCAATCCACTGACGGTTCTAAAGCGGTGGTGGACATCAGCGGTTTTACATGCCCTATTTGCAGCAAGAAAATGCGCACTCTTTTGTCACTGAAAAGACATGTCAGTTGGCACAATAATGTGGGGAACAATATTCAGAAGACTTACGAATGTTTCATCTGTAAAGAGACCTTCCGGTTCAACTGTCACTATAAACTACACATGAGAGAGCATTATCATGATACGAACCTTGATCCCAAGTATCTGACATGCAACATTTGCAACAGGAAAAGTAAACACCTACGAGCTGCACAAATGCATATGAAATATCACATGCAAACCAGATTCAATACCAAAGACTACCAGTGTTCAATTTGTAAACGAGTGTTTCAATTTCGTAAGGTATACCTTACACATATGGCAGTTCATTATAAGAAAGGTGATTCTGTCGAAAATACAGTAGTCGGTGATTCTTTCAGTAAGGATAACTCTAACGCTGGAGAAACACATAAGTGTCCACATTGCGATAAAATATGTGACTCGGAGTCTTCTCTTAAGTGCCATATATCGTGGCATAAATCTAAAACCAGTTTATACGGATCTAGATATCAGTGCACTTTCTGTGGTCTCATATTTACGAATAAAAGACGTCGAGAATTGCACCTCCGCACTCATTACGAAGATGAAAATGGCCCCTTCAAATGTGAAATATGTGGAAAGGGTTACAGCGATGAGAATTATTATCGTCGTCATCTCAAAGGGCATAATTTTGATCACGTCTCGCACAAAAAGCGTATAGCGAAACTGCGAGAAAATAAAGTCAAATGCCCTATTTGCATCCGTTACTACCCAGATGTGATCAAATTGATTCGTCATTTGCGTAGAACACATCCAGAAAGTAAAATGGTCAAGACAGATCCCGATGCGCCCCCGGAACAGGTCTATCCCTGTAAGTTGTGTGCAAAAGTGTTCTTGTCAGAAAAACGTTTGCAACACCATGGAGAATCGCATCTTCGTAAACATACTTGGATCAAATGCAAATTCTGCGGAAAGAAAAGCATTTCATTGAAAGCACACAACATTCACATTAAGAGTCATTTAACTGAAAAGCACGTTGATAACCCTCTAAAATGTCCAAAATGCGATGAGAAGTTCGTACGTGGTTATGCATTACATTATCACCTACGTGATGAGCATCAGATTAACGAAACTTGGGTGGCAGAACTTGATGATGAGCCGCTTAATGGGCCACTCAAAGAATTGCAGTGCTCCATATGCCTCAAAATACTTGCCTCCAAAGGCAATTTTGAAAGGCATATAGATTACCATAATTCTTTGCGTTGCAACTATTGCTTTGAATACTTCAATGCAATAAGATTCCTGGAAGGGCATCTGGTGTTTGGCTGTGAAAAGAAAAAGCTGATAGGTGAAACTGAAGTCTACCCAAAGAAAGTTAAATGCCATATATGCTACAAAGCATTCCATTTGCAAGTTAAACTGGACTGCCACATGAGGACACAGCACGGTATCAAAGTTTCAAGGGAAGCCAAAGAAGGCATCAAACAGATAGTATGTGATTATTGCTTCAGAGTCTTTGAAAATGAGGATGCATTGATGACCCATAAATTATACCATCGGACTGTTGGTTACTATGGCTGTATTTACTGCAATAGAAAGTTCAACACAATGACTCTGTACAGGAAACACAAGAATCACCATTTTACACAACTGAATGTAGACAATCCTACCAAATGCGAGCATTGCGACGAAACTTTTGTAGCGTTCAGGGACATGATTTATCACATGCGCGACGTGCACGGAGACAAAAAGGAGTGGATCGTCTTACCGAAAGAATCTATCGAGGAAGAGTGTAATATCTGCCATAAGAAATTCTACAATCTGCACAGACATCTGCGTTACCACGAGGAGAACAGATGTAAAAAATGCAGTGAATACTTCTTCTCTAGAACAGACTACGACAATCATTTGTGTACCATTGATAGCGACGACAATCCTGAAAGCAATGAGAAGGACCTACGGCCTACATATGATGAATGCAGATTTTGTTTTAAGCCAGTAACAAAGACAAATTCGAAATTGAAGCATGACCTCATACATAAGAGTTCAGGCTCTATCTCATGTCGATTCTGTGCATTAAAATTCAACACAATGGACGCATTCAATATACATGCATTTTCGCATCGCAGcagaaaatacacaaacaacCCTCTAAAATGTCGTTTTTGCAATGAGAAATTCATAAGATACGGACCATTGATGAAGCACATGAAGAATGTACATAAGAGTAAAGAGAAAATGCACTACCGATCGACTATACTACCCGAACGCTGTGTGGTGTGTGGCGACGACTTCCCGAACCTCCACAATCACTATCGAGCACATCTGCAGAACCAGTGTCAGTCCTGCCACAAATACTTCACATCCAGCAAACTCTACTTGGCCCATGATTGCAATAAACCCGATGTGGATCCCACAAAGGTGTTCACATGCGACGAAAATTTACTTGTCCACATCAACTCCTATGTACCCAAAGATGAGACTACAGAGAAATATTATGGCCAATCATATGATGAAAATGTTGAAGATGATTTGAATCAACCGCTGCTCGGATACGATGAAGACaacgaaaattttgataataaaatgccGCTGTCGATCCAGTCGCCCATAATTTCTGACGTGCTGTCTCTGTACAAAGAACAAGAAGTGCCAGAGGACAACAATGATGACATAGTCGAAATAATTGATGACTCTCCGAATACATTAGACAATAGGTATTTCCCTATGATAACCATAGATGATTAA
- Protein Sequence
- MAKLSDNSSAQCPKKSLDAGFNVPSPHNRQSSDSGFSNRTDLSNQTKPLSSSEEKFTPLLKRSTRKRSRESDDSNSVSSRFRDTPKYKENPRSRVNELKSTEKRRRLESDNTSTKESDYEDNSISQYTTDSDEPLLHKCETCGKQFESKHSLGQHKRVHSRVKKTNESNNSSLGENAVVNIPANNTEDDKEEEKLSCPKCGKMFKLKIMFNRHLQVCDSSSLENSASQQKELKVSLQNLNPEKKIECSMCGGNFKAIENLEKHMKMVHSAVLKDSERPQTVDKESGKVFVPCIFCHKPFEDYYIHAVHFNSCTQRSIVSTFSCLVCNSRYSSKKAYFKHLNDFHFSIKKEGKARASGEKTDTESFQCRLCSKNLSTQDQLITHLAAHMSNIDDGSAVSTAEDESRGSTQEDSISMHSEKSSGPSKCQYCDKVFTYGKSLTNHILMKHSQVEVELKNEPPDTSTVVAKNEEEPQESEESTEDEDDNTCDICEKHFSYKRLLIQHKKTKHNISSGTKRANFTLKDCSVKCLICDITMKVSEINVHNQQHLSNNMKPRNLYTCFECEDTFKSCQGLQNHIKLVHRLKRQVTKKFQVADLADFCEVVVTKTEPLDTFQSHNDFGEVPGQSTDGSKAVVDISGFTCPICSKKMRTLLSLKRHVSWHNNVGNNIQKTYECFICKETFRFNCHYKLHMREHYHDTNLDPKYLTCNICNRKSKHLRAAQMHMKYHMQTRFNTKDYQCSICKRVFQFRKVYLTHMAVHYKKGDSVENTVVGDSFSKDNSNAGETHKCPHCDKICDSESSLKCHISWHKSKTSLYGSRYQCTFCGLIFTNKRRRELHLRTHYEDENGPFKCEICGKGYSDENYYRRHLKGHNFDHVSHKKRIAKLRENKVKCPICIRYYPDVIKLIRHLRRTHPESKMVKTDPDAPPEQVYPCKLCAKVFLSEKRLQHHGESHLRKHTWIKCKFCGKKSISLKAHNIHIKSHLTEKHVDNPLKCPKCDEKFVRGYALHYHLRDEHQINETWVAELDDEPLNGPLKELQCSICLKILASKGNFERHIDYHNSLRCNYCFEYFNAIRFLEGHLVFGCEKKKLIGETEVYPKKVKCHICYKAFHLQVKLDCHMRTQHGIKVSREAKEGIKQIVCDYCFRVFENEDALMTHKLYHRTVGYYGCIYCNRKFNTMTLYRKHKNHHFTQLNVDNPTKCEHCDETFVAFRDMIYHMRDVHGDKKEWIVLPKESIEEECNICHKKFYNLHRHLRYHEENRCKKCSEYFFSRTDYDNHLCTIDSDDNPESNEKDLRPTYDECRFCFKPVTKTNSKLKHDLIHKSSGSISCRFCALKFNTMDAFNIHAFSHRSRKYTNNPLKCRFCNEKFIRYGPLMKHMKNVHKSKEKMHYRSTILPERCVVCGDDFPNLHNHYRAHLQNQCQSCHKYFTSSKLYLAHDCNKPDVDPTKVFTCDENLLVHINSYVPKDETTEKYYGQSYDENVEDDLNQPLLGYDEDNENFDNKMPLSIQSPIISDVLSLYKEQEVPEDNNDDIVEIIDDSPNTLDNRYFPMITIDD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -