Ejap029895.1
Basic Information
- Insect
- Eumeta japonica
- Gene Symbol
- ZNF296
- Assembly
- GCA_005406025.1
- Location
- BGZK01000664.1:162199-176592[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.29 64 6.0 0.0 3 23 111 131 109 131 0.96 2 15 0.00037 0.083 15.1 1.3 1 23 193 215 193 215 0.99 3 15 1.7e-05 0.0038 19.3 0.3 1 23 221 243 221 243 0.98 4 15 0.0015 0.33 13.2 4.7 2 23 249 271 249 271 0.92 5 15 4e-05 0.009 18.1 0.6 2 23 423 444 422 444 0.97 6 15 0.00013 0.03 16.5 2.6 1 23 450 472 450 472 0.99 7 15 1.1 2.5e+02 4.2 8.9 1 23 550 572 550 572 0.96 8 15 0.00074 0.17 14.2 1.2 1 23 579 601 579 601 0.98 9 15 7e-06 0.0016 20.5 1.9 1 23 607 629 607 629 0.98 10 15 2.7e-05 0.0061 18.7 2.0 1 23 635 657 635 657 0.98 11 15 0.0022 0.49 12.7 2.1 1 23 666 688 666 688 0.98 12 15 0.00038 0.085 15.1 2.2 2 23 738 759 738 759 0.97 13 15 0.0092 2.1 10.7 5.3 1 23 779 801 779 801 0.97 14 15 3e-06 0.00067 21.7 0.7 1 23 807 829 807 829 0.97 15 15 7.9e-07 0.00018 23.5 2.5 1 23 835 858 835 858 0.98
Sequence Information
- Coding Sequence
- ATGGAAGAAGTGAGTAACATGGATGTCGATCCTTTGAGCAATCCGGACACGTCCCAGTATCAACGGTATGACAACGACTATCATGAACAGAATGACAACCGGGGCTCATCACTTaagaatcaatttttcataaaatcggaATATTGTGAACAGAGTAATGCTtcaactgaaaatgaaaatgaaaaccaGAAAGCAAACGATGACACTtcaacagaagctgaaaaccAAAACATGTCCGAGCAGAACATAGCGCAGACTGTGACCGAATTACTGAGCCAAAATTTTAACCAAACATTACATGATATGTTACCTCAGTTCCCTTTTTATGGTTGCGCAGTATGCAATATCTCGTATTTAACCCTTACCGACTTGGACCGTCACATGGCTATACACAAAGACAGAATAACCTCCTGGGATTTGAGGCAAAGGGCCAAAGAGAAGAAGAAGTACAAGGTTAAAAGGATAAAAAAGGAAGTAGAAGAACCTGTCGATAAACAGAACGATGAGTCCGTGGAGCAAAGCTCAGAGGAACATAGCTCCAAGGAGAAGAATGCTGACGAGActctagaaaaaatatttaaatgtggtGTCTGTTACAAACAATTCGCTTTAAGTTATTACCTCAAGTTACATGTAAGATCTCACACAGGGGAAAAACCTTACACTTGCGCTGAATGCGGTATGTCATTTATTACGGCAAGTAAATTAGGCAGGCATAGGAAGTTGCATTCGATGGTGAAAGCCGAATGCCGCATATGCCATAAGACTTTTACTAGGTTTGAATATTTAACGAAGCACTTTGACAAGAAACACATGGAGGACAAATTGGAAGGGGAACCTTATGattacaATGCCATTTTGCCATATTTGAAAGAATTGGAAGAAGAAATGGAAAAGCAGAAAGCTGAAGAACAGAGTTCCAAACCTAAAGCTGAAGACGATTGGTTAATGAACACTGTGCCCGTGAAAGAAGAGCTGGAGGTCAAGATCAAAGTGGAGAACATAAAAGCAGAACCGATTGATGCGGAAATGCCGAATTCCGATCATGAAAGTTTTGAAGTCAACTTCGAACCTGTGAAAGAGGAAGAGTCAGATTCTGATTACTTCCCCGAAGTGAGCGCTGCCACTAAATCGATGGAGACGGTCAGCAGTCCAGTGAAACCCAAACAGAGAGGCAGAAGAAAGAAGAGTCCAGTGCTAGAAAACGAGAACCAAGATCGAGAAGACAAAAAAGAATTAGATTTCACAATGGAAGGAGAAGTGCTGAAATGTAAGGTGTGCGATAAGATTATTAAGACGCCATCATACATGCGCATCCACTTGCGCACGCACACGGGAGAGAGGCCGTACCGGTGCTATATATGCGAAAAGGGGTTCATCACGTCCAGCAAGATGCACCGGCATGTCTTGACGCACATGGAGGCCTGGGAGAGCGGTGATGCCGAGGAGATCACGGTCAAAGTGGAAGTCGACTGGGTCAATGGCAACCGGAATGAGAATGAACACGCTAAAGAAAATGAAGCAAAAACTGAATCTAACCAATCTGAAGGCGCATCGCAGAAGGTGAGCAAGAAGAAAAGGAAATTCCTGAAGAAGCACATCAAACTCGAGAAGAACCAGGAGAATAAGAAAAGACGAAAACGTCCCCACGCGTGTGAATTTTGCCACAAGAGATTTCTGCACTTAGAGACCCTACATGTGCACAGAAGGATGCACCGGGGGGAGAAGCAGTCTTTTGTATGCCACTTCTGCTTGACTAAATTCGAAGATGAAGAGAATCTGAAGATACATCTCATATCGCACACCGGTCCGAAACCTTACATATGCACCATATGCGGCAAGAGATACAAACGCAAAGACACGATGATCTACCATCGCAGGATGCATAAAATGGAGAAGAAGTTTCAGTGCAATGTGTGCAATAAAAGTTTCGTTGCGCCATGCAAGTTGCAGCGACATCTGTTGAGCCATAGGCCAGATAAATACGTAGTCAGATACGAGTGCCCTGTGTGTGCGCACATCTTCAACACTAAGTATCACATAGAGATGCATCTGACGACGCACGAGAAAGAGGGAGTCATACTGGAAGAAAACCGCGGCGAAATCCTCGCTATGGTACTACAGAACGCCAGAAAAATACAAGTACCCACAAAAGTGGATGCACCGGTGCCCAATTTCAAGGACATCATGCCCAGCGACGAGCGTTCCAGAGTTTGTAACATATGCGGCGAGGTGTTCCACCACTTCTTCTATTTAGAAGAGCATCTGAAGACTCACGGTTCGAAGCTGGAGCTGGGGAAGTCGGAAGCGCAATCCAAGGAGGACGAGAGACGCTACAAATGCACCGTCTGCCAGAAGGGTTTCAAATTGCACTATTACCTCAAATTGCATAGCTTCACTCACACCAAAGAGAAACCGTTCATATGCCAGCAATGCGGAAAGGGTTTCATTACTAAGGGCAAATTGAAGCGCCATCTGGAATCACATTCCGGATTGAAAAAGTATCAATGTCACATTTGCCTGAAATTCTTCACAAGGCCCAGTTACCTGAGGATTCACGTCAGGACCATACATGGCAGGAACGATAATTCAGAATTCAGACACGACATAATGTCGATACCCCTGGCGTCCACCTGTAACGAACGTCCTTTGACGATTTCAAGCTTTGGAGCGACAATTTCCCTGGCTTTTCACCCTCCACTCATAACCCCGCGCCGAAACGGCGACGCATCGGCGGAAAGAAAGAAGGCTATAGTCCATCACGAGATTATTATAACGCTGTCGCTGTCGCACATTGCGCCATGCGGGTGGAGGGGGGTGCGTGGCCGTTGCGCTACGGAACCCTTAGAATGCCAATCGTCTCTTTCATCATCCCGTGTCGTTTTGTCGGTCGTTGCGacgaaatag
- Protein Sequence
- MEEVSNMDVDPLSNPDTSQYQRYDNDYHEQNDNRGSSLKNQFFIKSEYCEQSNASTENENENQKANDDTSTEAENQNMSEQNIAQTVTELLSQNFNQTLHDMLPQFPFYGCAVCNISYLTLTDLDRHMAIHKDRITSWDLRQRAKEKKKYKVKRIKKEVEEPVDKQNDESVEQSSEEHSSKEKNADETLEKIFKCGVCYKQFALSYYLKLHVRSHTGEKPYTCAECGMSFITASKLGRHRKLHSMVKAECRICHKTFTRFEYLTKHFDKKHMEDKLEGEPYDYNAILPYLKELEEEMEKQKAEEQSSKPKAEDDWLMNTVPVKEELEVKIKVENIKAEPIDAEMPNSDHESFEVNFEPVKEEESDSDYFPEVSAATKSMETVSSPVKPKQRGRRKKSPVLENENQDREDKKELDFTMEGEVLKCKVCDKIIKTPSYMRIHLRTHTGERPYRCYICEKGFITSSKMHRHVLTHMEAWESGDAEEITVKVEVDWVNGNRNENEHAKENEAKTESNQSEGASQKVSKKKRKFLKKHIKLEKNQENKKRRKRPHACEFCHKRFLHLETLHVHRRMHRGEKQSFVCHFCLTKFEDEENLKIHLISHTGPKPYICTICGKRYKRKDTMIYHRRMHKMEKKFQCNVCNKSFVAPCKLQRHLLSHRPDKYVVRYECPVCAHIFNTKYHIEMHLTTHEKEGVILEENRGEILAMVLQNARKIQVPTKVDAPVPNFKDIMPSDERSRVCNICGEVFHHFFYLEEHLKTHGSKLELGKSEAQSKEDERRYKCTVCQKGFKLHYYLKLHSFTHTKEKPFICQQCGKGFITKGKLKRHLESHSGLKKYQCHICLKFFTRPSYLRIHVRTIHGRNDNSEFRHDIMSIPLASTCNERPLTISSFGATISLAFHPPLITPRRNGDASAERKKAIVHHEIIITLSLSHIAPCGWRGVRGRCATEPLECQSSLSSSRVVLSVVATK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -