Ejap016648.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eumeta japonica
Gene Symbol
-
Assembly
GCA_005406025.1
Location
BGZK01000269.1:87408-92727[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.0054 1.2 11.4 1.1 1 23 45 68 45 68 0.93
2 28 6.4 1.4e+03 1.8 0.1 2 23 93 115 92 115 0.83
3 28 0.00018 0.04 16.1 4.0 1 23 138 160 138 160 0.97
4 28 0.011 2.5 10.4 0.2 1 23 164 186 164 186 0.98
5 28 0.02 4.5 9.7 2.2 1 23 191 214 191 214 0.96
6 28 0.022 4.9 9.5 1.0 3 23 223 244 221 244 0.94
7 28 3.6e-05 0.0082 18.3 5.9 1 23 272 294 272 294 0.97
8 28 1.5e-05 0.0035 19.4 1.0 1 23 300 322 300 322 0.99
9 28 0.022 4.9 9.5 1.0 1 17 328 344 328 345 0.92
10 28 0.17 38 6.7 0.8 3 23 410 431 408 431 0.93
11 28 0.36 80 5.7 0.1 2 23 460 482 459 482 0.95
12 28 0.011 2.5 10.5 2.1 1 23 504 526 504 526 0.97
13 28 0.011 2.5 10.4 0.1 1 23 530 552 530 552 0.95
14 28 0.062 14 8.1 0.3 1 23 557 580 557 580 0.92
15 28 0.0097 2.2 10.6 4.2 1 23 586 609 586 609 0.97
16 28 8e-05 0.018 17.2 0.2 1 23 616 639 616 639 0.96
17 28 0.00011 0.025 16.7 0.8 1 23 645 667 645 667 0.96
18 28 7.5e-07 0.00017 23.6 0.7 1 23 673 695 673 695 0.99
19 28 1.3e-05 0.003 19.7 4.4 1 23 701 723 701 724 0.95
20 28 0.77 1.7e+02 4.7 0.3 1 23 873 896 873 896 0.93
21 28 0.00047 0.11 14.8 0.2 3 23 922 943 920 943 0.93
22 28 0.00088 0.2 13.9 0.2 1 23 965 987 965 987 0.98
23 28 0.00074 0.17 14.2 0.2 1 23 991 1013 991 1013 0.98
24 28 0.0044 1 11.7 1.4 1 23 1018 1041 1018 1041 0.95
25 28 0.015 3.3 10.1 0.3 2 23 1048 1070 1048 1070 0.92
26 28 5.9e-05 0.013 17.6 2.2 1 23 1077 1100 1077 1100 0.96
27 28 0.001 0.23 13.7 3.7 2 23 1107 1128 1106 1128 0.96
28 28 9.9e-06 0.0022 20.1 0.7 1 23 1134 1156 1134 1156 0.99

Sequence Information

Coding Sequence
ATGACTGAACTGGAAAATCTCAAACGGAACGGGTCCGGAAGAACGAAACGATACAAAACAAAGACGAAAAACAATCTATTGACAGTTCTAGAACACACGACAGCCTGCCCGTTCCGATGGCTGCACAACACATTCATGTGCTTCTACTGCGACACCAAGTTTAACGACATTATATCCTTGAAGAGCCATACTATGGACAACCATCCGGACACGACCGAGACTTTCAATAAATTCAGGTGGTCTTACCGCCATGTCAAAGTTGAAATAACGGATTTGAAGTGTAAACTGTGCGATTCAGGGTTTGACGACGTGAAACCTGCCAAAGAACATCTGGCGTCCGACCACGAGAAGAGAATCGATTTCGCTTATAGCGATGCATTGATACCTTACAAGCTCCTCAATTCGAATTCGTACACTTGTCACGTGTGCGACAAGGTCTACTATAGGTTCGCGCACCTGTCTAACCATCTTAATGACCACTACAGAAATTACGTTTGCGACACTTGCGGTGCACCGTTTCTCGAGAGGAGTCGACTGAGGCAGCATCTGCTAACTCACGGTGGCGGCTCATACCCCTGCGTGCATTGCGGGGAGGTCTTCGAATCCGTGATCACTAAACGGCACCACATGTCCAGGTTCCACTGGAAAAATGGATTTAGATTGGCTTGTCCGCATTGCCCTGAAAGGTTCAAAGCGTACAGGGATCGGATACATCATATGTCAGTCGTGCACAACGTGAAAAACGAGAACTGCGGCTGTCCGTTCTGCATTCTTCCAGCTGGCCCTTCGAAGGACGACGACAGTACGAAACCGTACGAGTGCAGCGAGTGCCACAAAAGGTTCACGCGAAAACATGAACTGAACTCCCATAGGGTCTCGCATACCGGCGAAAGGCCTTACACATGCGAGGTGTGCTTGAAATCGTACGGCAGGAAAAGGACACTACGCGAACACATGAGAATACATAACAACGATAAAAGGTTCGCGTGTCAGGAATGTGGCAGGGCGTTTGTTCAGAAATGCTCCCTAAAGAGTAAAGAGACCACCGGCTCGATAGAAAAGCGGATGGTACCGCAAGAAACGAGACCGTCACAACAAGCGTATTCAGAGGAATACGTGAAACTAATGAACGATATAGACGAAATGATAGCTCGCAAAAGAAGCGTCTTTCACATATTGGAATGTTCTAGAGTCTGTCCTTTCAAGTGGGCGAAAAACCTTTACGGGTGCTTCTTTTGCGATGAGCATTTCAACGAGCCGACGTGGCTGAGGGAGCACAACGCGACGAACCATTCGCAAACAAACGGGCAACAGATCAGGGCCTCCATTAAGAAACTAAAGAAATACGAAATGGTCAAAGTTGACATAACCGATATAAGTTGTAAATTGTGCGACGACGCTATAAAAGATTTCGGAACGCTTAAGCAGCACCTTCTAACGGTACACAACAAACTCATAGATCCCAAGTACGGCGACGGCGTTCTGCCTTTCAGACTCGCCAACGGCGGTTTCCACTGCGTGCTGTGCGATAGGAAATACGAAGAGTTCAAACTGCTGAATCAGCATATGAACGTGCACTTCCAAAACTTCATATGCGAACAGTGCGGGGCCGGGTTCATGACTCCGGAACGGTTGAAAACCCACGCGTTCTCCCACGAGACCGGTTCCTTTCAATGCGACGCCTGCGACAAGATCTTTAGGTCGATGAACGCCAAAAACGAACACTACGCCTCTGTCCATAAACAAGTGAAGAGGCATAGGTGCACGCAATGTTCGGAGACgttcagaaattattttcagaggAACAAGCATTTGAACGTGGTACATGGGATTAAAAGCAAAGAATTCAAATGTAACCTATGCGACAAAGTATTCACGCTCAGCGGTAAATTGGGAAACCATATAAAGGCCGTGCATTTAAAGGAGAAACGGCACGCTTGCAACATTTGCGAATGGAAATTTTACGCCAAATCGGAACTGAAGGAGCATATGATAAGGCACGGAGGCGAAAGGAAATACCAGTGCGGCGTGTGCAAGAAGGCCTACGCCAGGAAGTACACGCTGAGGGAGCATATGAGGATACATAATAACGACAGACGTTTCATATGCGCGGTTTGCGGGAAGGCGTTCGTGCAAAACTGTAGTTTGAAACACCACATGAAAGTTCACCATCCGAATCCTGCTTCTGCGGCGTTGAACAATTTGCCCGTAGTAGTCTACCACAATCCTGACACGAGATCCGAAACGTCTCTTAAACCGGAAACAGTTCAAAGGGAAGAGAAGATTGTACCACTGTTTCAAGTGGCGTACGACAGGACCTTGTGTCGGCCCTTGGGCACCCTAGTGGACTTTAACCGTTTGACGCCGAAACTGAAAGAGTTTCTCAAGAGAATCGAGGTCAAAGACGAATATCCTACCAATGTTCTGCATTCTCCATCGCGGAGCGTATCTCCTCTTTCGCCACTGCCTTCCGCGACCGTGAACGGCCCCGTCGTAAAAGATGCGACGAAATCGAAACCAAAGTCATCGGCACCTAAAATTCCGGATCTGAGACAAAATGCCTTAACCGTGTTCGAATTTTCTACTGTATACCCTTTTGTATATGGTAACAACAAATTCAAATGCTTCATATGCTCGCAGCCCTTTTTAGAGACGCCACCTTTGAAGGAGCACATGAATTCCACTCACACTTTTGCCCCGTTAAAAAGGTTGATAAACAATAGGAGAGAGACGGTGATTAAAGTAGACGTGAGTTCTATAATCTGTAAAATATGCACCACGCCTTTTAAAGATTTGACATCCCTGAAAGTGCACCTCAAAGACGTGCACCAGAAACCTCTGGACGCCGAAGTAAAAGACAACATGATACCGTTCAAATTGGACGAAGGGCTTTACAAATGCTTTCTGTGCGATCAGGTTTTCATAAAAGTGAGACTGCTAGTGATACACATGAGCGTCCATTTCAGTAATTACAGCTGTGACGTGTGCGGGTCCGGTTTCATGACGCTGAGGCTGCTGAAGAAGCATCTGGAAGTGCACGAAAGCGGGAACTTCCCCTGCGATCGTTGCGAGAAAGTGTTCAACACCTCCCACAAGAGGTCGCTTCACATACGCGGCGTACATCTCAAACAGTGCCCGAGACGGTGTCCGATATGCCCGGAAAGGTTCAACTCCAACTACCGAAGGACCATTCACCTTCAGGACGTGCACAATCAGTCGACGAGGGTGCACAAATGCGACATATGCGGTCGCGGTTTCAATCTGAAATACCATCTCATATCTCACACGAGGGCGGTGCACTTGCAGGAGAGGAACCAGCAGTGTAAACTGTGCTTGCAAAGGTTCTGCAGCAAGGAGACCCTGAAACGGCACATGGTGATACATACCGGCGAGAAGAACTACAAATGCGAAGTTTGCGGCATGGCGTTTCTGAGGAGGAAGAACCTTAAGGACCACATGAGATTGCACGACGTAGCTTAA
Protein Sequence
MTELENLKRNGSGRTKRYKTKTKNNLLTVLEHTTACPFRWLHNTFMCFYCDTKFNDIISLKSHTMDNHPDTTETFNKFRWSYRHVKVEITDLKCKLCDSGFDDVKPAKEHLASDHEKRIDFAYSDALIPYKLLNSNSYTCHVCDKVYYRFAHLSNHLNDHYRNYVCDTCGAPFLERSRLRQHLLTHGGGSYPCVHCGEVFESVITKRHHMSRFHWKNGFRLACPHCPERFKAYRDRIHHMSVVHNVKNENCGCPFCILPAGPSKDDDSTKPYECSECHKRFTRKHELNSHRVSHTGERPYTCEVCLKSYGRKRTLREHMRIHNNDKRFACQECGRAFVQKCSLKSKETTGSIEKRMVPQETRPSQQAYSEEYVKLMNDIDEMIARKRSVFHILECSRVCPFKWAKNLYGCFFCDEHFNEPTWLREHNATNHSQTNGQQIRASIKKLKKYEMVKVDITDISCKLCDDAIKDFGTLKQHLLTVHNKLIDPKYGDGVLPFRLANGGFHCVLCDRKYEEFKLLNQHMNVHFQNFICEQCGAGFMTPERLKTHAFSHETGSFQCDACDKIFRSMNAKNEHYASVHKQVKRHRCTQCSETFRNYFQRNKHLNVVHGIKSKEFKCNLCDKVFTLSGKLGNHIKAVHLKEKRHACNICEWKFYAKSELKEHMIRHGGERKYQCGVCKKAYARKYTLREHMRIHNNDRRFICAVCGKAFVQNCSLKHHMKVHHPNPASAALNNLPVVVYHNPDTRSETSLKPETVQREEKIVPLFQVAYDRTLCRPLGTLVDFNRLTPKLKEFLKRIEVKDEYPTNVLHSPSRSVSPLSPLPSATVNGPVVKDATKSKPKSSAPKIPDLRQNALTVFEFSTVYPFVYGNNKFKCFICSQPFLETPPLKEHMNSTHTFAPLKRLINNRRETVIKVDVSSIICKICTTPFKDLTSLKVHLKDVHQKPLDAEVKDNMIPFKLDEGLYKCFLCDQVFIKVRLLVIHMSVHFSNYSCDVCGSGFMTLRLLKKHLEVHESGNFPCDRCEKVFNTSHKRSLHIRGVHLKQCPRRCPICPERFNSNYRRTIHLQDVHNQSTRVHKCDICGRGFNLKYHLISHTRAVHLQERNQQCKLCLQRFCSKETLKRHMVIHTGEKNYKCEVCGMAFLRRKNLKDHMRLHDVA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-