Basic Information

Gene Symbol
Camta2
Assembly
GCA_005406025.1
Location
BGZK01000812.1:17846-46348[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.2e-18 3.3e-13 51.2 0.7 40 86 2 47 1 61 0.92
2 2 1.9e-15 1.2e-10 42.9 0.1 78 116 145 182 134 182 0.93

Sequence Information

Coding Sequence
ATGCTGCTCTACAGCCGAAAGAAAGTGCGGTACAGACGCGACGGTTATTGCTGGAAGAAAAGGAAAGACGGGAAGACGACTCGAGAGGACCACATGAAGCTGAAGGTCCAGGGCACAGAGGTCGAACATGGAGACTACATCATGCTCCCCGTCTCTTTGGAGAAGACACGAGCCCAGCTGCGGCCCTTATGGGGTCGCGTAATTAAATGTACTGGCGCGAATAGCTTGTACAACATTGATTCGGCTTCCAAAGCAGAACCGATAAAACGAGATAGATATCGGCACGTCTCCTCTCACGCGGCGGCCCCGAAAAAAGCGTTCCTCTGGAGACGAATTTGCGAGGCGTGCGCCGGCAGCGGGGCGCGCGGGGGGCGGGGACGGCGACGTGCGCCGTCGGCGACGAGTCGCTTGAGCGGTGACGCGTCCGCGCGTGTGTCGTGCATCTACGGCTGTTACGTCCACTCGGCCATCCTGCCCACATTCCATCGCCGCTGTTATTGGTTGTTGCAAAATCCTGACATTGTCTTAGTGCACTACTTGAATGTACCTTATCCAGATGACAACAAGCTAGCGACTGTAGCTCCTAGCTTAGCGCTGTGGGCGGACAAGAAGGAATGGACGAAAGATGAATTAGTTAACCAACTGAAACCCATGTttTTCAGTGAGGATGAGCCAGATATCAATAACGAATTGGAAATATCGACGGCGGAAACCGTAGAAGCTATAGTCGGTCAGCTAATGGAAAAACAACGGGCCGCACGGGCAGCAGCGCTGGCTCGACAGCTTGAGTGCAGCTGTCCCGACTCCACTTGTCAGGATTCAAGAACTTGTGCTCATCACCTACGGCGCATCCAAGCAGCAAAACCACCACCCTCCGACCATCACGTTTCTTCCACAACTGGACCGTCACCAAGACCTTTAGCACCACCACGGCAATATACCAGAGATCAAAGACCAGCACCGCAGCCAGCTTCTCCTTTACTTCTTTCCTTAGGTCAAATCCAAGGTGGTGGTGGACTCCTCATCCTCAACGGCACCAGTAATACGAGCCAGCAACATTCTTCTTTGGTATCACCTTTGTCGGTAACTTCGTTCGTCTGTGAGGAACCAAGAGATCGATATCGCCATCAGTACAAGCCGACTTTCGTGCTGAAGAGAGAAGTACCAGACAATCAACCATCATCATGCCTTCATGGGTCTGATTCCGCTTTCGAAGTTACAGACAGTCACACTgaaaagaatattgaaataacagAGACTTTCGAAAGAAGAATCAAAACTGAACCCCGGTCCAGAGCTCAGGTGACCGTGGCGAGTGCTCCCGCAACCCCTTCTAGGTATTCCGATTTAATCGACCGTTTGGATGGTAAGAACCACATTGTGACTGAGAACAATTGTGATGATACGTTAGTTTTACTGGGCCCGGACGGTGCACATTTAGAGTCTTCCAGTAATTTCTTTGATGAGACTTTAGATTTATCACACGAAGATATACAGAAGACGTTGTCAGCGAATATGCCCACATGCGAATTGAATAGAAACAGTGTGCGATCCAACGACGGGTCTGCTAATGTTATGGTGTCCGGTATAGATACGATGGATTTTATAGAGAGCTGTGAGGCCGTCGCGTCGCCCACTCATGTGGTCGACGACAACGTGTTCGTCAACCTCGATGCGTTCGACATGCTCGGGGATTTTCCCGAGTTAGAAGTTTTGGATCCCAGTACGATATCAACTCACATCGTGaattcTCGTGGCAAATCAAGCAACGGAGAGGATACCACTGAAAAAATGGTGACAGACTGCAACGAGGAGGGCGCACTCAACATCGTCGACTACTCCCCCGAATGGGCTTATTCTGAAGGTGGTGTCAAGGTGCTCATAGCTGGGCCCTGGAACGACAGCACTGACCAGTATACTGTGCTTTTTGACAACTTTCCTGTACCATCGATATTAGTTCAGAACGGCCTACTCAGATGTTATTGTCCAGCTCACGAGGCCGGCCTGGCGGCGCTGCAGgtggcgcgcggcggccgcgtgGTCTCGGACACGGTGGTGTTCGAGTACAAGGCCGGGCCCGCGCCGGTGTCGTCGTCGCCGGCCTCCGCCCCGCCGCCATCCCTGGACCTGCAGAAGTTCACGCTGCTGCAGCGGTTGCAGAGACTGCACGGGAGACTGCAAGTCAAATTGGAGCCGATAGATGATAGCAATCAGATCGAGGATGTTCAATTGTACACCAATCCTAAATTCGAAGACCGCTTGGTGACTTTTTGTCGTGCGATCAGCTCTAGGACGTCTAACACATCACTGGAAGGTTACAACAGCGAACCGGGAGAGGGCGGTTCAACGGTACTCCATTTGGCGGCCGGCCTGGGCTACACGGAGTTGACCACCACGCTGCTGCGGTGGCGTCAGGACGACCACAGTCTGCCGCTGGAGAAGGAAGTGAACTTGGCTGCGAGGGATCACGAAAACTATACACCGCTGCCCGTAGACTTTGACGTCTTCGTCGAAAGCGCCGGCAACATAGAGATGCTGACGGTGTgcgactgccctatgggtgcttAG
Protein Sequence
MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTEVEHGDYIMLPVSLEKTRAQLRPLWGRVIKCTGANSLYNIDSASKAEPIKRDRYRHVSSHAAAPKKAFLWRRICEACAGSGARGGRGRRRAPSATSRLSGDASARVSCIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLATVAPSLALWADKKEWTKDELVNQLKPMFFSEDEPDINNELEISTAETVEAIVGQLMEKQRAARAAALARQLECSCPDSTCQDSRTCAHHLRRIQAAKPPPSDHHVSSTTGPSPRPLAPPRQYTRDQRPAPQPASPLLLSLGQIQGGGGLLILNGTSNTSQQHSSLVSPLSVTSFVCEEPRDRYRHQYKPTFVLKREVPDNQPSSCLHGSDSAFEVTDSHTEKNIEITETFERRIKTEPRSRAQVTVASAPATPSRYSDLIDRLDGKNHIVTENNCDDTLVLLGPDGAHLESSSNFFDETLDLSHEDIQKTLSANMPTCELNRNSVRSNDGSANVMVSGIDTMDFIESCEAVASPTHVVDDNVFVNLDAFDMLGDFPELEVLDPSTISTHIVNSRGKSSNGEDTTEKMVTDCNEEGALNIVDYSPEWAYSEGGVKVLIAGPWNDSTDQYTVLFDNFPVPSILVQNGLLRCYCPAHEAGLAALQVARGGRVVSDTVVFEYKAGPAPVSSSPASAPPPSLDLQKFTLLQRLQRLHGRLQVKLEPIDDSNQIEDVQLYTNPKFEDRLVTFCRAISSRTSNTSLEGYNSEPGEGGSTVLHLAAGLGYTELTTTLLRWRQDDHSLPLEKEVNLAARDHENYTPLPVDFDVFVESAGNIEMLTVCDCPMGA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-