Basic Information

Gene Symbol
dnajc2
Assembly
GCA_005406025.1
Location
BGZK01000060.1:522856-532436[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.00097 3.2 9.7 0.0 4 31 442 473 441 476 0.86
2 2 6.7e-14 2.2e-10 42.2 0.2 3 44 566 611 564 613 0.92

Sequence Information

Coding Sequence
atgactGATTTAGATTCCACTAACTTAACGTTatctaatgataattttttaagaaaagtagtGATTTCAACACCATTTGTTATAAGGAAAGTGGAATGCGTTGGCTCTGCTTTTCTTAGATACTACAATGTAAAATGTCACGGCGAAGATGCTCTCTTgcaaatttctaaaaaagatgaaaaatcgGAGGAAATTATTTTCGACGATGACGTACAGTATTTGCGTAGCTTGGATCCTAAAGAGTGGAAACAGCAAGATCATTATGCAGTATTGggtatgaaaaatttaagatataagGCTACTGATGACGATATTAAGAGAGCGTACAGACAAAAAGTCTTGAAACATCATCCTGACAAACGTAAAGCTCAAGGAGAAGATGTTCGGAGTGATGATGATTACTTTACATGTATAACGAAAGCCTACGAAATACTTGGTACCCCTGTAAAGAGGCGGTCATATGATTCTGTAGATCCTGAGTTTGACGATGGGTTGCCCACACcagcagaaataaaaaaagatggaTTTTATAAAGCATTCACTAGATACTTTGACCAAAATGCTCGATGGTCAGATAAAAAGAATGTGCCTTTACTTGGTAATGATGACAGTCCTCGAGAGCAAGTTGAAAGattctACGCATTTTGGTATGAATTTGAATCGTGGCGCGAATTCTCTTATCTTGATGAGGAAGAAAAAGAACGCGGAGTCGACCGCGAGGAACGCCGCTGGATCGAGAAACAGAACAAGGTAGCAAGAGCTAAACGCAAGAAGGAGGAAATGGCGAGGATTCGTAGCCTAGTTGATCTTGCATACAATAATGATCCTAGAATACAAAGGTTCAAACAAGAGGACAAAGATAGGAAATTAGCTGCTAAACGAGCAAAACAGgATGCTGTTCAGGCTAAGAAAGCTGAAGAAGAACGGCTGATACGAGAAGCAGCACTCGCCAAACAAAAGGCTGAGGAAGCTGAACGAGCACGTCTTGAAGCTGCGCGTGCTGAACgtgaacaaataaaaaggaatctgcgtaaagaaagaaaaactatcAGGGATATATGCAAAGCTAACAATTTTTATGCTATTAATGACAGCGAAACTGTGTCACATATGGCTGCTGTAGAAAAAATTTGTGAAGTTCTGAAATTTGTAGAGCTACAGACATTTGTGGAAGAACTCAAGAGTACAGGTAGAGAAGcgtttttaaaaactatgatGGAAACTGAAGAAAAATTGGAAGCCGAACGCAGAGCACTATTTGAGACAAAGAAAGCTGAAGAACAGAAAGCTAGAAAGGAGGCGACTCTGAAAGCCCCCATTGACTGGACACCAGAAATGACTCAACTGTTAATCAAAGCAGTAAATGTATTCCCAGCTGGTACAAACCAAAGGTGGGATGTTGTAGCAAACTTTTTAAATCAACATGGTTCATTCATTGATAGTAGGCGTTTTAATGCAAAAGATGTTCTAGCTAAAGCAAAGGATTTACAGAGTTCTGATTTTTCCAAAAGCAGCCTCAAAAAAGCTGCAAATGAAGAAGCCTTTGGTCAGTttgaaaaggaaagaaaaaaagtaGCAACATCATTGGTTGATGACGATAACATATCTAAGAGTGATAATGGACAGCTAGTCAATGGTTCTATCAAACCAAAAATGAATGGAGATGCTGGTAAATCTGACCAAAAAGAAGATAGACCATGGACGAAAACTGAACAAGAACTCCTGGAACAAGCGATAAAGACATTTCCTGTAAATACACCAGAGAGATGGGAGAAAATAGCCGAGTGTATCCCAAATCGTTCTAAAAAAGATTGCATGAAGCGATACAAAGAGCTAGTGGAACTAGTTAGAGCAAAAAAACAAGCTGCTAACCTTAGCAAATAA
Protein Sequence
MTDLDSTNLTLSNDNFLRKVVISTPFVIRKVECVGSAFLRYYNVKCHGEDALLQISKKDEKSEEIIFDDDVQYLRSLDPKEWKQQDHYAVLGMKNLRYKATDDDIKRAYRQKVLKHHPDKRKAQGEDVRSDDDYFTCITKAYEILGTPVKRRSYDSVDPEFDDGLPTPAEIKKDGFYKAFTRYFDQNARWSDKKNVPLLGNDDSPREQVERFYAFWYEFESWREFSYLDEEEKERGVDREERRWIEKQNKVARAKRKKEEMARIRSLVDLAYNNDPRIQRFKQEDKDRKLAAKRAKQDAVQAKKAEEERLIREAALAKQKAEEAERARLEAARAEREQIKRNLRKERKTIRDICKANNFYAINDSETVSHMAAVEKICEVLKFVELQTFVEELKSTGREAFLKTMMETEEKLEAERRALFETKKAEEQKARKEATLKAPIDWTPEMTQLLIKAVNVFPAGTNQRWDVVANFLNQHGSFIDSRRFNAKDVLAKAKDLQSSDFSKSSLKKAANEEAFGQFEKERKKVATSLVDDDNISKSDNGQLVNGSIKPKMNGDAGKSDQKEDRPWTKTEQELLEQAIKTFPVNTPERWEKIAECIPNRSKKDCMKRYKELVELVRAKKQAANLSK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00923637;
90% Identity
-
80% Identity
-