Ejap021724.2
Basic Information
- Insect
- Eumeta japonica
- Gene Symbol
- -
- Assembly
- GCA_005406025.1
- Location
- BGZK01000398.1:295253-297401[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.3e-11 1.8e-07 32.5 0.0 1 37 15 52 15 58 0.90
Sequence Information
- Coding Sequence
- atggTGAAaacgtataagaaaaaaacaaatagagggGATTGGACGCAAGAGAGTATGGAAAAAGCTGTGGATGCTGTTATAGAAGGAAAAATGGGGTATATGTTAGCAGCGAAGACATTTTCAGTTCCTCAGACAACTTTAGAAAGAAAAGTCAAGGCATCTCGCGAGAATTTGGCTGCTTCTTCATCTGCAAGTATAAAAGTTCCTTTAGGGCCTAAACGACCTATTTTTACAGAAGACGAAGAGAAAGAGCTTTGTAGCTATATAATAGACATGGAGAGTCGACTTTATGGTCTTACAACCAAAGACCTAAAGGCATTAGCTTATAATCtatcagtaaaaaataataaaccacaTCCTTTCAACGTTCAAAAACAAGAAGCTGGCAAGGACTGGGTTCAAGGTTTTTTGAACAGACATCCGGAGTTGTCAATAAGAAAACCCGAAAGCACTTCAGCTGCGCGTGCTGCCGGGTTCAACAAAGAAGTTGTTGatcaattttatacttttttgggTAATATCTATGATGAACATTATCTTACACCAGACCGCATTTACAACTGCGACGAAACTGGCATTTCAGTTGTACCTAAAACCAAATCAGAAATTATAGCGAGAAGAGGCCGAAAACAAGTAGGGGCCTTAACTTCTGCGGAACGAGGTGCTACGATTACagttgaaatatgtttcagtGCCAGTGGGCAATATATGCCCCCTATGATGATATTCCCCAGAAAAAGGATGGACCCTCAGTTAATGCTTAATGCTGCCCCTGAAGCATGGGGAGTTGTAAGTGACTCGGGCTGGATAATCACTGAATTATTTCTCGGGTGGTTTAAACGATTTGTAAAATTCAGTGGGGCGACAGCAGATCGACCTGTATTACTGTTATTAGATGGTCATAGCACCCACACAAAAAACATAGATTTGATTAAAGAAGCTCGATCCCACGGggttattattttgtgtttccccCCACATACAACTCACCGTCTTCAGGTCGTCGACGTTGCTTATATGAGACCATTGAGCAATTATTATGATCGACAAATCACGGCTTGGCTTCGCAGCAATCCAGGGATGGTAGTTACAATCCGGCAAGTTGCAGAAATTTTTGGAAAGGCCTTCATAGAGACCGATTTTGCTCCTTCTTTAGTGACTGACATTCCGTGCGCTCAATCAATAACTGCAACCGCCAGTGCACCAAACAATGAACTTGCTACTGTAACAACACCATCGGTGAATCTTGCAACATCGACTTCCATTGAAACAGCACCAATTAGCCAATCTGCGCCGACCACATCAGTTATCAGCAGTGTCGCTATTATAACACCTACAACAATTTCAGCAGCCGTAGCACTTGCTGAGCCAGAAACGCAGCCAATTAAGGCTTTCCATGTGCCAGATATCACTGGAGCTGCTACCACTGCAGCAACATCTCGCGCCTTACCTGCAAAAGTTTTACCATCTGCCGAGGTTGAAGCAGCGACTATTTATACGACCACTATGATGGTTTCTGCCGCCCCGTCGAGTCCTAAGCCCGGATGTTCTACTTGGCTTATTAATAACGAAATAGACCGAAGACCAACAACTCCACAACAATCCAAATTTTCTGTTGCTAGTCCACAGCAAATATTACCCCTTCCAGCAACTCGTAAAACTTCACGCGTGACTCGAAAACGAGGAAAAACAGCTATAATTACTGCGTCACCCTACAAAACAGAACTGGaagaaacgataaaaaaaaagaaacttttggAAGAGAGTAAgcaaaaaagaaaggaaatcaGACAATTAAAGTTAAAGAAGACGCAGAAGAAGACTAGAGGGAAAGAAGGTAAAGTCATATTAAAGAAGAATGTAAGGAGCAATCGCAGTTCGTCCAGTAGCAAAAGCGAgagtaatattgaaaatacccCTTGCTTATACTGTAGTGGACTATATTTGGATTCCGATGAAGGCTGGGTTGCGTGTTCTATATGTGGCAATTGGGCACATTGCTCTTGTGCTGGCGTGGATGATGAGGATGATGAAGCAACATTCACCTGCGAATTTTGCGAAAAACAGTAA
- Protein Sequence
- MVKTYKKKTNRGDWTQESMEKAVDAVIEGKMGYMLAAKTFSVPQTTLERKVKASRENLAASSSASIKVPLGPKRPIFTEDEEKELCSYIIDMESRLYGLTTKDLKALAYNLSVKNNKPHPFNVQKQEAGKDWVQGFLNRHPELSIRKPESTSAARAAGFNKEVVDQFYTFLGNIYDEHYLTPDRIYNCDETGISVVPKTKSEIIARRGRKQVGALTSAERGATITVEICFSASGQYMPPMMIFPRKRMDPQLMLNAAPEAWGVVSDSGWIITELFLGWFKRFVKFSGATADRPVLLLLDGHSTHTKNIDLIKEARSHGVIILCFPPHTTHRLQVVDVAYMRPLSNYYDRQITAWLRSNPGMVVTIRQVAEIFGKAFIETDFAPSLVTDIPCAQSITATASAPNNELATVTTPSVNLATSTSIETAPISQSAPTTSVISSVAIITPTTISAAVALAEPETQPIKAFHVPDITGAATTAATSRALPAKVLPSAEVEAATIYTTTMMVSAAPSSPKPGCSTWLINNEIDRRPTTPQQSKFSVASPQQILPLPATRKTSRVTRKRGKTAIITASPYKTELEETIKKKKLLEESKQKRKEIRQLKLKKTQKKTRGKEGKVILKKNVRSNRSSSSSKSESNIENTPCLYCSGLYLDSDEGWVACSICGNWAHCSCAGVDDEDDEATFTCEFCEKQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01283308;
- 90% Identity
- iTF_01283308; iTF_01283309; iTF_01283310; iTF_01283305; iTF_00404683; iTF_01283307; iTF_01283306; iTF_00071340;
- 80% Identity
- -