Ejap016704.1
Basic Information
- Insect
- Eumeta japonica
- Gene Symbol
- bab1
- Assembly
- GCA_005406025.1
- Location
- BGZK01000270.1:88809-90329[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-13 1.2e-09 39.5 0.0 4 45 341 382 338 382 0.92
Sequence Information
- Coding Sequence
- ATGGGCAGCAGTGAAGGTCAACAGACATTCTGTCTGAAATGGAACCATCACAAGACAAATCTTGTAGAAATATTGGAGGCTCTCATCAAAGTCGAGACGTACGTGGACTGCACGTTGGTAGTAGACGAGCAAGTGACGTTTAAAGCACATCGCGTCGTCTTAGCTGCCAATTCGCCTTATTTCCAATCAATTCTTGCTGACGTGCCCATGGATCACTGTAGTATTCTTTTTCCCGGAGTCAAAGATTTTGAAATGCGTGCGCTACTAGAATATATGTATACCGGGGAAGTTAACGTTACTCAGGCTCATATACCACGAATAATGAAAGTGGCCGAGCAGCTCGAAGTCAAAGGGTTATTTGATATGAGTGAGTTGCGGCGGCGACCCGGCACCGGCGAGCGTACGCCCGCTTCGTCGCCTCCGCgtgtcgccgccgccgccccttCTAGCGCATCACCGCCCGCTCCCGCGGCAATGGGCCCTCGTTGGCCGCCCGTACCACCAGCGCCAGTGCCCCCAGCACCGCCGATCGCACTTTCTGCTGCATACGACTCCACCGATATGAATCCCCTCAAACGTAAAAAACTCTCCAGCATGTTAGCTTCTCGAGATACTCCTATTCTACGCAATGTACTCGCCCAGACCACGCCACCGGACTCGTCGCAACCGGTATCCCTGGTCTGTCATCCTGTCGGTCAGCAACAGGCCCCACCGCGTTTGCATTCGAACGGATCGGCACACGAACCTGAGCGAGCTCCTAGTCCGCCGCGCGCTTTCGACTACCGACCTCGTCGGCTTTCTTCGCGCGCTTCTTCTCCACATTACCATCGTTCCGATCGCTCTGAAGACGCTCACTCGCCATATACAGAGCGCTCTTTTGAAGATGACCCACCGCGCTCTTTCCACCCTTCGCCACCACCGCCTGCTTACCAACAACAGGATGTACGCGCTGGCCTCGCTCCTTATGTGCCTCCGCAGCAGAAGCCCGAGTGGAAACGTTACAAACAGTACACACGTTCCGATATTATGTCCGCCATAGAGTGCGTACGTAACGGTATGAGTGCATTACAAGCTTCACGCAAATATGGTGTTCCGTCGCGTACGCTTTACGACAAGGTAAAAAAGCTCGGTATTACAACAAGTCGTCCGATGAGTCGGGGCGTAAAGCGGGAACCGAACGGTGCTGCTTTTCCTTATGGTTTGAGTGGTGCCGGCGGCGGTGACGAGAGTTCACCGGCGGCACCGCTGTTGGATGCCTCCTTTCTGCAGCAAGCGTTAGAAGGTGCAACCCGTGACGGCGGGCGAGAGGCATTGCATGCCATGGCGCTGGCGGCCGCAGCGCATGCAGCCTTGGCGCCGCGATCGCCTGCACGTTCACCACCGCATTCTCCGCGCACTCCTCCTCCAGACGATGATCACGTGGAAGATTTATCGGTAGCGCGGCGCCGCGAGCCTGAGCCTCCGACGGGCGTTATTGTACCACCGCGCAACTTCGCCCTCGACTGTAGCGAGCGCGATTGA
- Protein Sequence
- MGSSEGQQTFCLKWNHHKTNLVEILEALIKVETYVDCTLVVDEQVTFKAHRVVLAANSPYFQSILADVPMDHCSILFPGVKDFEMRALLEYMYTGEVNVTQAHIPRIMKVAEQLEVKGLFDMSELRRRPGTGERTPASSPPRVAAAAPSSASPPAPAAMGPRWPPVPPAPVPPAPPIALSAAYDSTDMNPLKRKKLSSMLASRDTPILRNVLAQTTPPDSSQPVSLVCHPVGQQQAPPRLHSNGSAHEPERAPSPPRAFDYRPRRLSSRASSPHYHRSDRSEDAHSPYTERSFEDDPPRSFHPSPPPPAYQQQDVRAGLAPYVPPQQKPEWKRYKQYTRSDIMSAIECVRNGMSALQASRKYGVPSRTLYDKVKKLGITTSRPMSRGVKREPNGAAFPYGLSGAGGGDESSPAAPLLDASFLQQALEGATRDGGREALHAMALAAAAHAALAPRSPARSPPHSPRTPPPDDDHVEDLSVARRREPEPPTGVIVPPRNFALDCSERD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00025187;
- 90% Identity
- iTF_00923543;
- 80% Identity
- iTF_00689525;