Ejap035227.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eumeta japonica
Gene Symbol
Arid5b
Assembly
GCA_005406025.1
Location
BGZK01000890.1:42057-57007[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.4e-16 5.3e-12 47.7 0.0 3 89 269 351 267 351 0.87

Sequence Information

Coding Sequence
ATGCATCCCGAGGAAAACCACGTTCAGAGGGTGCGTGTTAATTTACATCCATCCCTTGTGACAATTGTGTTCTACAGCGACACGCGCCCGCCATCTGCCGTATCGGGTACAAACTGCGACGAAGTGGTGGCCATCAACGAAAAGGTGGTACTCCGCGCCGAGGACCTGCTCAGCTGGCTGTGCTCGGGCGAGGGCTGGCGCTGGGGCTTGCGGGCGGTGTGCAGGGACACGTGCGCGCCGCCCGCGAcgcccggcgccggcgccggcgcagcctCCACCGCGCCGCTGCACTGCTCCAAGCTCGACTTCAGCGACGTCGAAAAAGAGAAGAACGCCCTCAAAGACGAAAAAGACGCGCCCGGCGTGGTAGTGTTTTCATATCCACGGTACTGCCGCTACCGGGCACTGCTGCGCAGGCTGGACGGCATCCAAGCAGCCTGGCTCAGGGACTCGCTCGTCGCCGCACTGGGGGGATATGCTGCTCCCACGCACAACACCAGGATACTGTACTGCAAGGAAACGTTCGAATATCCGGAACTGGAGGGCCATGAGTTCGTGTGCAACCACCTGGCGCCGCGGCTGAAGGGGCGCCCGCGCGGCCGTCGCCGCAAGCGCTCGCGCAGCGCCGACCGCGACCGCGACCGCGACAGCAGCGACAGCGGCCACCgcacgccgccgccggcgccgcccgcggaGCCTCAGACCCCGCGCCGGCTGTCCTTGCGCAACGGCGGCGACAGCAAGAACAGCGACGAGGACTACGAGGACGAGGGCGCGGCGTGCGTCAGCGCCGAGGCCGACGACCGGGCGTTCCTCGTGCAGCTCAAGGCCTTCTACAAGGCGCGGAGCACGACCCTCAACATATCGCACTCTCTCAAGGACCTGTCGCTGCGCGCCCTCTACCACGCGGTTTCGAAGCGCGGCGGGTACGCAGCAGTGTGCAGGGAGCGCGGCTGGCGGCGCATCCACGCGGCGCTGGTCCGGAGGCCGCCCTCGCCCACGAGCGCCGGCCGCACCCGAAGGGACTACGAAAGattattattaccTTTCGAAAATCACGAGAGGCGCAACGGGGCTAAGCTAACCAACGGCACGGACAAACAGCTAACGACTCCGGACAAGAGCAACGACCTAATAGAGACCATAGACATAGCCGAATCACCGCTGAGGGAAGTCGAAACGAAACTGGAAGAGGTTAAAAAGAGGTTGAGAACACCCTCGCCAGAGAAGAGGGCGGACAGCCCCAGGAGCGTGTACGACTTCACGGACAGCAAGGACGACCTGAACATAACAACGAAGCCGGCCGCGGAACTGAACCAGGAGTTCTTAGACTCGCTGCCGAAGCCCGAGGCGATGGAGGAAGAGAAGAACGATGCGCCCATCAAGATAAGCGTCAAACCCGTAGAGAAATTAATAGATTCCAAGCCGCCGGCGATCATAGACAAACCTCTCATGAAACTGGCCGGACATCCTTTGACGGACTACTTGAACAGCTACGTGGACACGAGGTACGCCGACGAGGACCTGTCGTCCATCGTCGCCGAGATCGCTGCCAAAATGAATTTGAACTCGCACAGCGTGCTCGCCGAGCTGGCCGGGCAACAGCCGTTAAGCGAATCCAGCAACGTATTCCTAGCCCAGATAGCACAGAAGCTCAATTTAGGTAAACCGGTCTCTTGCGTGAGATCAGACGCTAGTCTCGGCGGCGGTGCGCTCGCGCAGCTGTCGTCCTTGGGTGACAAGTACGCCACTTTACCGAACGGGCCGCATCAAAACGGCGTACTCAGCACGGGGGGTGAGCAGAAGAGTCGTCCAGTTGGCCGAAGCTCGTTGAGGTCGGTGCGCGTGAAGCCGGCCCGCGCCTccgcgccccccgcgccgcTCAACCTCGtccccggcgccggcgccgtccTCGGGCCCGTCCCCGTCCCCGTATCCGCCCCCGCTCCCGCTCCAGCACGCACCACGCCCGTGCCCCCTCTGCGACCGGACTCGGCCTCGTGCTCCCCCCCGTCCGTGTTCAACATGCCACCGCCGCAAGTCACGTCCACTAATCACGACCACTCCGACGACGAAATCGTGGAAGTGCCCTACAAGCCGAAGACCCCGGAGATCATAGACCTGGACGAATATCCGGAGAGTCCTCAAGCGGCCAAGAAGAAAAAGCTGGACATCCTAAAGGAGAGGGGCCTGGAGGTGACCGCCGTGCCCAACAACTGGTCAGCGCCCGCCGCCGCTCCCGCCAACCTGCTGACGTCCCACGCCGCGATGTTGGGCCTCAACCCGGCGATGCAGCACCAGATAATAACTCAGGCGCAACTGTTCCAAATGTACAACATGATGCCGCCGAACTACGCCAACGGTATACAGCCACCTAAAGTTATACAGGGCAAGGGAATTTTCGGATCGTCCGGGCCGGAGAAGACCGTATACGGCAACCCCAAGGACCCTTTCATGCCCCCACCTCACATACTGCAAGGCACCCCCATCAAACCCGCGAGGGCCGTACTGACGACGACTCCCACACCCGCGCCCGCTCCCGATATCCTAGATCTAACCTGCAAAACCTCGCACACCCCGCCCGTACAGAAACCCGCCGTTGAAATAGTTAGGGTGCCCAATGTACCGTCCTCGTCGCCGAAAATCGGTACGACCCCACAGAACTTGTCCAAAAATTACACACTACTAGACGGCAAAGCGGTAGTCGGCTCCAATTTAGAGATAACGCTAGTCAGCCCCAAACAGAACCAGGCGAAGCCGCCCAGGCCGCCCCAGAAGAGGTCCTCCAACGGCAAGTTCATGTCAAACAAAACGCCGACTCCTCCCAAGGAATACAAAAACTTCCCCCAGAGCCATTCGCCCAGAGCGACGAACCAAGATAGGAAAGTCAGCAACATTGTAGTTCCTACTTACCAGATCAACAGCAGGGAAGAAGCGAACACGGCGACCACCGCCGCCGCGAAATCGCAACCTCCGTCGAACTTGGTCGATTTGTCCAAGATGCAACCTCAGGGTATGTCGCCGTACATGGACCCCAGCATATACATGACAGCTCTGTACAGCAGCCTCGCGGGTCAGATGGACCCCAGGCAGTTGGCGTTGTACAGGGAGCTGATGGCGGGCCAGTTCAGGGGCTATCCGAATTTATTGAATATGGGGGTAGGCAGTACACCCACCACTAAGAATTGA
Protein Sequence
MHPEENHVQRVRVNLHPSLVTIVFYSDTRPPSAVSGTNCDEVVAINEKVVLRAEDLLSWLCSGEGWRWGLRAVCRDTCAPPATPGAGAGAASTAPLHCSKLDFSDVEKEKNALKDEKDAPGVVVFSYPRYCRYRALLRRLDGIQAAWLRDSLVAALGGYAAPTHNTRILYCKETFEYPELEGHEFVCNHLAPRLKGRPRGRRRKRSRSADRDRDRDSSDSGHRTPPPAPPAEPQTPRRLSLRNGGDSKNSDEDYEDEGAACVSAEADDRAFLVQLKAFYKARSTTLNISHSLKDLSLRALYHAVSKRGGYAAVCRERGWRRIHAALVRRPPSPTSAGRTRRDYERLLLPFENHERRNGAKLTNGTDKQLTTPDKSNDLIETIDIAESPLREVETKLEEVKKRLRTPSPEKRADSPRSVYDFTDSKDDLNITTKPAAELNQEFLDSLPKPEAMEEEKNDAPIKISVKPVEKLIDSKPPAIIDKPLMKLAGHPLTDYLNSYVDTRYADEDLSSIVAEIAAKMNLNSHSVLAELAGQQPLSESSNVFLAQIAQKLNLGKPVSCVRSDASLGGGALAQLSSLGDKYATLPNGPHQNGVLSTGGEQKSRPVGRSSLRSVRVKPARASAPPAPLNLVPGAGAVLGPVPVPVSAPAPAPARTTPVPPLRPDSASCSPPSVFNMPPPQVTSTNHDHSDDEIVEVPYKPKTPEIIDLDEYPESPQAAKKKKLDILKERGLEVTAVPNNWSAPAAAPANLLTSHAAMLGLNPAMQHQIITQAQLFQMYNMMPPNYANGIQPPKVIQGKGIFGSSGPEKTVYGNPKDPFMPPPHILQGTPIKPARAVLTTTPTPAPAPDILDLTCKTSHTPPVQKPAVEIVRVPNVPSSSPKIGTTPQNLSKNYTLLDGKAVVGSNLEITLVSPKQNQAKPPRPPQKRSSNGKFMSNKTPTPPKEYKNFPQSHSPRATNQDRKVSNIVVPTYQINSREEANTATTAAAKSQPPSNLVDLSKMQPQGMSPYMDPSIYMTALYSSLAGQMDPRQLALYRELMAGQFRGYPNLLNMGVGSTPTTKN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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