Esab036155.1
Basic Information
- Insect
- Eumerus sabulonum
- Gene Symbol
- -
- Assembly
- GCA_951905685.1
- Location
- OX645064.1:92836190-92839498[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 2.9 5.1e+02 2.6 1.4 3 21 647 665 646 669 0.92 2 11 0.0015 0.26 13.0 0.3 2 21 691 710 690 711 0.92 3 11 0.082 14 7.4 0.6 1 23 731 755 731 755 0.95 4 11 0.19 34 6.3 0.3 1 22 760 781 760 784 0.89 5 11 3 5.3e+02 2.5 0.5 2 23 808 829 808 829 0.95 6 11 0.0023 0.4 12.3 0.5 2 23 853 875 853 875 0.96 7 11 0.0048 0.85 11.3 0.0 1 21 880 900 880 901 0.94 8 11 3.4 6e+02 2.3 0.1 2 23 931 952 930 952 0.90 9 11 0.0025 0.44 12.2 3.9 2 23 967 987 966 987 0.96 10 11 5.2e-06 0.00092 20.6 4.0 1 23 993 1016 993 1016 0.97 11 11 0.095 17 7.2 0.9 1 13 1034 1046 1034 1046 0.92
Sequence Information
- Coding Sequence
- ATgttggaagaggacctcgatGATACACACTTGTGTATTAAGTGTAGCGCAACGATTGTCGGCCTCGACAATTACGTTCAACATCGGAAAACAAATTGTGGCGGAAAGACGCCACGAACCCCAATTGTTCCTGGTTATGGTGGTTTTGAGTATCCAGATTCATCCGGTTATGGGAAGTCTGAAGCCACTGAAAGGAAGACAACGAAGACCTTAAGTGATCCGTATGACCTGCCAGATGAGCTCGGAGCAGATGTGTTCTTCTCATCACTGCAATTGCAAAGCGTCCAGGCGAGCAGTGGTGGTAAGACAAGTTCGAGTCAACAGATGTTGACCCGAAAGGCCACGGCAACAATACTGTCAGCAGGACGTGAGGAAACTGagggcgattggcaagaggaaTCCACTAACAACTCCGACAACCTAATGAAGGTCGTACGGGATATCAGTGAGTCGAAGAAGTTTGAACCGATTTTTAAACCCATTGCATTTACTCACGGATCACCGGAGCCCGAGCAgagtgatgatgatgacgatgatgacgagGACTTCgaagatgacgatgatgatgatgaagactACATTCCAATGCCCTATAGTGGAGGAAAGTGGAAGCCGGGAAGTCAGCCGGCTCCAAAAAGTGGTGGCAAGTGGAAGAGAAAATCTGATAGTACACTTCCGATTCCCCCGAGTCACGCACGTGGAAAATGGAATCCTAAGGCAAACAAGAGCACACCCCATCGATGGAAACCATCTCAGGCACAAACTGCCGGTAAAACAACACCGGAGCCAACGACATCCGACGATCTTCTCTCGCAAATCCGTGCGAAACTTAAATCCAACAATGAATACATCCCTAAGGAGAGAATTGTCTCACCAGTTGTCCCCGAATCAGGGGGTAAATGGAAACCAGGATTTTCCAAGCCATTTACTAGTAGAAAGTGGAAATCGCATGACGTGCAGAATTCTCCAGAAGTCCTCGAAGCTCAAACTGGCGGTAAATGGAAGCCTGATGCCAAGTGGAAAACCACTGGTGGACAAGAGTATCCAGGTGTGTCTCTATCTCAAACCGGAGGCAAATGGAAAACATTTAATCCGCAGGAATCTTTAAATGTATCTGAACCACCTCAAATAGAAGGAAAGTGGAAACCTGGCGGATCGAAAACTCTTAAACTTCTCGTCCTACCAACGTCAATTGGTAGCAAATGGAAAGCCGGTGAAGGAAATGAGTCCCCAGAGGCTCTGGAGACACATGTTAGTGGAAAATGGAAACCGGGACAACAACCAACTGATTGCAAGGAAACAGTCCAACCATCATGGGAGGAACAAGAATCTTGGCCAGAGGCAGGCGATAGTCATCCCCCGTTCGAGCACACCAAAGGCAAATGGGTGCCCGGGACAAAGGTCGAAAGACTCGAATATAAAGAGGAGGCACTTCCACCGCCGCAAGACTTCTGGTGCAACATATGCTGTCGGAAGTTGAAAACCAAGGCCATCTACGAGAAACATCTCAAGTCTGGCGTGCATGTAAAGAAATCTGAAACCGAACAGCAGCTTGCCCGGGTGGCTGTGGAGAACCTCGAGCTATCCAAACAGCTCATTCGTCCACCGGAAATTCTCATCGAGCGAGCTGTTTCCCCTGAAGCTGTGCCTGGTAAACGCAAGCGTCGCAAGACCTTTATTCGATGCGAGGTCTGTAAGCATCGTATGCAGAAATACTTGGTCGGGAAACACCTTATCTCGCATTACCACTACGTTCGAATGGCTCTCAACCGCGAGAAGTCATTCGGCATGGTGCTGGACCATATCCACCAAATCGTGCTTCAGTCGCCGTTTCAGTGTACCCCGTGTCGTTTCTATGCAAACACAGAGGAGAATTTCCTCGATCATTGGAACTCGGTGGAGCACCGCGACAAGACTGAGAGACCTGGAAAGTTTTGGTGCAGTTTCTGTCGTTTCGAGTGCGAGGACAATAACCAAATGAGGCGCCATCTGCTTGGCGTCGATCATCGGGAGGTCATTCTGGCTATCAATCGATCGGTGCCTATCTGCATCAGCAAAAAAGTGAGTATAGAGTGTCCGAAGTGCCATCAAGGCTTCCGTTACAACATGGAACTGCGTCAACACGCGCAACGGTGTGATAGCGCCAAGGAAGCCCCCAAAGGTACTGCATCAGATGAATATCAATCACGATTTCGCTGCAAACTCTGCCCGGACGAAGTTCTAAAATCAAAGACCGCCCTTCAGAGGCACGAGAAATTGAAGCACAACAAGCGACACTACTTCTGCTCGGTCTGCGATGTGGAATTCGAAAATCCGCTTAAGGCGATCAAGCATCGTAAAAGTACTCTTCATCGAAAGAACTCGGCTGAGAAGTTAAGGAAGTCGAAGAGAGAAGCAAAGGCGAAGTCAAAGAATGAAGCTCAGTGCGAGAAGTGTGAGCATGTATCGTCGTCAGATGTCGAGGCTATGCTACATCAGCTATCTCATTCCGAGAAGAAAAATTTCGAGACACAGCAACCACATTCAAAATTAAGCAAAGAGGAGAATACCCATCGTAAGTGTCCCTATTGCAAGGACATTTTCAAGACCAAATTAGACCTCAAAGCCCACCTAACTGTCTCTCACCCCGAATCCAAACACATCTGTCCACTCTGTGGTGAAGCATTCACTCTACCCCAAGAACTCGGTTCCCATCGACGATACAAAATCTGCATTGCCTCCACCTCACAACAACCCGGTCCTTCTGCCTCTCCTCCAAAGGAGGAGGAAACAACATCAAAGAAATCCTGGAAATGCTCAGATTGCTCATTCGAATCCGCCTACGAATCCGAGTTGATATTCCACCGCATCATCCACACTCAGGGTCTGGAAGCACTTCAGTCCGACGACAAGAAACTCAACTGCCCAATCTGTGAGAAATCATTCGCTAAGCACTCGCTACGGCATCATTTACGCCAGCACACCAATGAGAAAATATTCACATGCGGGATCTGCAACCGGTCATTCTCCCGTCGGCACAATTACAAGGAACACATGCAGTATCTGCACGCAGTCGGGGGCGTGAAGAAACGGAAGCCAAGTCCAGCGACCGACGAGAGCTTTATTTGCGATACGTGCGGCAAGATTTTCCGAACCAAGTGA
- Protein Sequence
- MLEEDLDDTHLCIKCSATIVGLDNYVQHRKTNCGGKTPRTPIVPGYGGFEYPDSSGYGKSEATERKTTKTLSDPYDLPDELGADVFFSSLQLQSVQASSGGKTSSSQQMLTRKATATILSAGREETEGDWQEESTNNSDNLMKVVRDISESKKFEPIFKPIAFTHGSPEPEQSDDDDDDDEDFEDDDDDDEDYIPMPYSGGKWKPGSQPAPKSGGKWKRKSDSTLPIPPSHARGKWNPKANKSTPHRWKPSQAQTAGKTTPEPTTSDDLLSQIRAKLKSNNEYIPKERIVSPVVPESGGKWKPGFSKPFTSRKWKSHDVQNSPEVLEAQTGGKWKPDAKWKTTGGQEYPGVSLSQTGGKWKTFNPQESLNVSEPPQIEGKWKPGGSKTLKLLVLPTSIGSKWKAGEGNESPEALETHVSGKWKPGQQPTDCKETVQPSWEEQESWPEAGDSHPPFEHTKGKWVPGTKVERLEYKEEALPPPQDFWCNICCRKLKTKAIYEKHLKSGVHVKKSETEQQLARVAVENLELSKQLIRPPEILIERAVSPEAVPGKRKRRKTFIRCEVCKHRMQKYLVGKHLISHYHYVRMALNREKSFGMVLDHIHQIVLQSPFQCTPCRFYANTEENFLDHWNSVEHRDKTERPGKFWCSFCRFECEDNNQMRRHLLGVDHREVILAINRSVPICISKKVSIECPKCHQGFRYNMELRQHAQRCDSAKEAPKGTASDEYQSRFRCKLCPDEVLKSKTALQRHEKLKHNKRHYFCSVCDVEFENPLKAIKHRKSTLHRKNSAEKLRKSKREAKAKSKNEAQCEKCEHVSSSDVEAMLHQLSHSEKKNFETQQPHSKLSKEENTHRKCPYCKDIFKTKLDLKAHLTVSHPESKHICPLCGEAFTLPQELGSHRRYKICIASTSQQPGPSASPPKEEETTSKKSWKCSDCSFESAYESELIFHRIIHTQGLEALQSDDKKLNCPICEKSFAKHSLRHHLRQHTNEKIFTCGICNRSFSRRHNYKEHMQYLHAVGGVKKRKPSPATDESFICDTCGKIFRTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00992171;
- 90% Identity
- -
- 80% Identity
- -