Esab028118.1
Basic Information
- Insect
- Eumerus sabulonum
- Gene Symbol
- L
- Assembly
- GCA_951905685.1
- Location
- OX645063.1:5758327-5802272[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 5.2e-06 0.00092 20.7 1.7 1 23 342 364 342 364 0.98 2 14 0.43 77 5.2 5.8 1 23 370 392 370 392 0.98 3 14 2.2e-07 4e-05 24.9 3.1 1 23 398 420 398 420 0.99 4 14 1e-05 0.0018 19.7 0.3 1 23 426 448 426 448 0.98 5 14 0.085 15 7.4 0.1 2 23 548 570 547 570 0.96 6 14 0.05 8.9 8.1 1.5 1 23 651 673 651 673 0.97 7 14 0.007 1.2 10.8 1.1 2 23 681 702 680 702 0.95 8 14 8.9e-05 0.016 16.8 1.4 1 23 710 735 710 735 0.91 9 14 0.0013 0.24 13.1 2.9 1 23 827 849 827 850 0.96 10 14 0.00098 0.17 13.5 4.6 2 23 1034 1056 1033 1056 0.96 11 14 0.73 1.3e+02 4.5 0.1 1 23 1062 1084 1062 1084 0.89 12 14 0.015 2.7 9.7 0.0 2 23 1092 1113 1091 1113 0.96 13 14 0.00051 0.091 14.4 0.1 1 20 1233 1252 1233 1255 0.96 14 14 0.11 19 7.1 1.0 1 23 1262 1284 1262 1284 0.93
Sequence Information
- Coding Sequence
- ATGAACCTACCGTCCACTCATTGTGACGATGTGGCATCGGCGGCTGTTGAACGGGTGATACCAGTATTATACCGAAAGGATGAAGATTTTAAATCCTCCAGGTGTGATTTGAATGTGTCGTCCTTAGGCTTAACCGGCGAAGATAATCTGTGCGCCGATGAGCAAGAGCACAACCTAATTGACCCAAAGGAGGAAATCATTTCAGATGTCGACAGTGACATTGACGGCGAGGACAATTGCGATGACTTTGAAAACACTAAGGGTCATGAAGATAACATCAATGATTTCCCGACTCCGACACTGATTGACAAACCACAAACCGAGGATGAGTACTTTTTAGATGAGAACAAAAAACTGGAACAGCTTTCTGCTAATACCGAAATCGAGGATGAGGAACCAAGCTCTGACAGTTTCTATTCGGATCTTTACTCCACGCACACCTCGTCCAGCTATTCGCCCTCCATGTCGGACGGAACAATTACTCCAAACTCATTGCACAGCAACCATCAGCCACAACACCATaaccatcatcatcagcatcagcATCAGCATCAGCACCAGCAACATCAACAGCGTCAGAGGCTACAGCATTTGCAGTATGAATGTGAACAAAAGAATAGTGGTGGTCGGAATCGCGACAGGCATCATCACAATCGACGTACTATATCGGGCACCTTAAATGGAGCAATAGCTACTGGTGGTGTTGGTGTCATCGGTGACGAGGATGAgaatgatgacgatgacggaGACATTGATGAAGATGACGACGCCGCAAATTCTAGTGAGGAAAGGATTTTCCTCTCATCAAACTCGACTGGTGCTAACGAGGCTACGAACAATGCCACAACAGCCACAACTACATCAACATCGACGGTAGGTAGTAACATGAGTGGCGCAACCAGCAGCGGTGAACATTCTTCAAAAATACCAACGAAATTGCGGAAAATCGATAGGGATTCGGCAAAGTTACTGGATAAGTTGACAAGTGATGGTATTAAAAGCACGACCGACCGCGACGGATCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGCCTTGGGTATCTGAAGAAGCATGAACAGAGTCATGCCGAGCATCTTCCATTCAAATGTGACTACTGTGCAAGGCTTTTTAAGCACAAGAGATCACGAGATCGCCACACGAAGCTCCATACAGGCGATAGGCGTTATAGATGTCCCCATTGTGAGGCTGCTTTTTCACGAAGTGATCATCTCAAGATTCATATGAAAACCCATGATAACCAAAAACCCTTTCAATGTACCATTTGTAATCGCGGCTATAACACCGCTGCCGCTTTGACCTCACACATGCAAAATCACAAGAAACAGGCAGCTCTTCTAGCCGCCGGTGGAAATCCGGCAGCACTTAATTACAGTCCAAGATCGACGGGTTCGGGTTCAAGCAACGGTAGCCTACAGAAACGCAGAAATCCATCAGCTGCAAGCACTAAAAGTCCTAGTCCAAGCACATTGGAATATGCAAAACGTCTACGAAGCTCCTACATCTCATGCATGTATTGCACGAAATCGGACTTCTTAACCATGGAACAATTGGGCAATCATATTCAAGCAATGCACGAGAAGGAAGCACTTGCAAATCAGTCGGCTTTTCAAATGTCATGCGAGTTCTGTACCATGAAGTTTCCCAATATCCCGGCAATATTTCAGCATATTCGGACCATTCACATCGATCGTCTCTCCAGTCCAAGTGCTTATCTCGAAAACTTCTCACGACTAGCGTCAAGCGGAACGTTTAGCCCGCGACTACTTACATCGAAATCGCATGAGATAAAAGTCAAAGTCGAAGAAACAAGCCCAAAGGCAGTCGAGAAACACGATGACGAACCGACTGATTTGAGTCAGAATAAACGTTCGTCACAGACACCCGCACAAGAGTCGAGTGATGTCGCCGAGAAGCCTGGAGTTTTTTTCTGTAACCAATGCACCGATGGATTTCCTGATTTCGATAGTTTTCGAAACCATCTCAAGTCACACATAGTCCAAGGTCTCAATCTAGTCTGTCACCACTGCGGACAGGCGCTGAGGGAGCAGACAGAGTATGAGCGGCATGTAGTATCTCATTTCCTCATAACCAGCTCGGAATACACCTGCACCGATAAGAACTGTAATAAGACCTTCTCCAAGCCGGAAGAGCTGCAAAAACACCTCTTCGACAGTCACATTCAGACCATGTACAAGTGTCTACTTTGTTCAGATCTATTCGAGACAAAGGTTGCGATTCAGGTGCATTTTGCATGTGTCCATTCGCCggaaaataaaatattccgcTGCTCAGCCTGTATGGATACGTTTCACGGTGAGCAAGAGTTCCATGTTCATGTGAAGACTCGTCATCAGACTGTTGCCGGATCACCCATACAATGTATGTTCTGCCGAGCAATATGCTCTTCGGAGTTGGAAATGCATTTTCATTTAGCCGCTCACGCACGTCAATTTCGATGTCCATCGTGTCCGGAAACGTTTCATGTGGAATTCTTACTCGATCGTCATATGCAGACTCATCATGGCCAGAAGGATGTTGAGTCGGCGTCAGTGATGAATCAGCCGACAATGAATCCCATAAATCCACTGTATATGAGCGCGCTTTTCAGTAAACCATCGGCATCGACTCAGAATAATAACAACAGCATGATCGACTATAATGCCTTTGCCATGGGCAAGAATCTATTTGGCAATAGCTCGGGAAATAAGTTCTACAATCCCCTGCAGGTGGACACCAACTCGGCTATGAAGCATCCTCCGCTAGTATATGCTAGTTTGAATCAACGATACTTTGACACAAATCGGACTATTTTGGAGATGTACAGTCAACAGCAGCAGGAGAAGCTTGGCAGTGCTGCAGCGAATTTTTTCAATAGCCCCAATAGTCTTATTGGCAGAAGTGCTGCATCCAAGCCACAGACGGAGTTTAATAAACTTCCAGAGCAAACTGGAAATGGCAGTACGGGTGGTGGTTTCAGTTGTGGCATGTGCGAACGTAATGACTTCAAGACCGAAGCTGAAATTCATTCGCATCGAAAAATCGTTCACAACCTCAAGACTGGCGTAAGTTTGCGTTGCGCTTATTGCAGCGGTAACTTTAAATCACGCAGTGAACTCGAACATCACATGAAAACCTGTCACAATTCAACGGGTAAACATAAATGCAATATTTGTGATGACATCTTCCCATCGCCTGCCATTCTTGCCGAGCATAAGCTTCAGCATTCGAAAGTTGGTCAGTCGGGGAAATGCTCTAATTGCGGAAAAGCCTTGGCAGACGTGGCTGCCTTTAAAAGTCATCTGTTGGAGCACAACACAGAGGGGCAGATGCCAGTTCAATGCATTTGCTGTCGCCAGACACTTCATTCGGACTTTGAAATAGGTTTGCATgccaaGTTCCATACTAAATCGTCGAATATATCGGAAAATGTATGCGCTCTATGCCTGGAGGCATTACCCAGTACGGCTGAGACTAAGGTTTGCGAGAAATGCTGTCGAAAGCATAACTTAAACGCCAAGCTGAATAGTCAGCGTAATTTTGACAGTTCGTCAGGCTCGTCGAACTACGTCGAGAACCGATGCAATTTGTGTAAGGTGATCATGCCGCATGCTCAGAAACTACAAGAACACTTGGTTGAACACACGTTTGCCGGCTGTGAGGATAGAGGTTTCACGTGCTACATATGCTCGACGGTCTTTACGACACCTGCCGGCTTACTTAATCACATGCCGGGCCATGGATCAAACTCCCGACCATATGATTGTAATCTTTGCAGTGAACAATTCTACTTTCGTGCTGAGTTAGATCATCATCTAGTTGATCATGAGATTGTTGATCGTTTGAAGAATGTGCTCAGCGATGATAACACGAGTCATATGGCGAACGGGAAGAAACCTTTAGATGAGTCGTCGACGGTAGAGGAATCGCCATCGACTAAACGTGAATCGAAACAGTTTGATGACAAGGCCGCCGATGAAGAGGACGATGAATATATTGAAGTCGAAAAAGATCCAGAAATCGGCCATAACGATTCGGGACCATCCGAAAAGGCCGACTAG
- Protein Sequence
- MNLPSTHCDDVASAAVERVIPVLYRKDEDFKSSRCDLNVSSLGLTGEDNLCADEQEHNLIDPKEEIISDVDSDIDGEDNCDDFENTKGHEDNINDFPTPTLIDKPQTEDEYFLDENKKLEQLSANTEIEDEEPSSDSFYSDLYSTHTSSSYSPSMSDGTITPNSLHSNHQPQHHNHHHQHQHQHQHQQHQQRQRLQHLQYECEQKNSGGRNRDRHHHNRRTISGTLNGAIATGGVGVIGDEDENDDDDGDIDEDDDAANSSEERIFLSSNSTGANEATNNATTATTTSTSTVGSNMSGATSSGEHSSKIPTKLRKIDRDSAKLLDKLTSDGIKSTTDRDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAALLAAGGNPAALNYSPRSTGSGSSNGSLQKRRNPSAASTKSPSPSTLEYAKRLRSSYISCMYCTKSDFLTMEQLGNHIQAMHEKEALANQSAFQMSCEFCTMKFPNIPAIFQHIRTIHIDRLSSPSAYLENFSRLASSGTFSPRLLTSKSHEIKVKVEETSPKAVEKHDDEPTDLSQNKRSSQTPAQESSDVAEKPGVFFCNQCTDGFPDFDSFRNHLKSHIVQGLNLVCHHCGQALREQTEYERHVVSHFLITSSEYTCTDKNCNKTFSKPEELQKHLFDSHIQTMYKCLLCSDLFETKVAIQVHFACVHSPENKIFRCSACMDTFHGEQEFHVHVKTRHQTVAGSPIQCMFCRAICSSELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHGQKDVESASVMNQPTMNPINPLYMSALFSKPSASTQNNNNSMIDYNAFAMGKNLFGNSSGNKFYNPLQVDTNSAMKHPPLVYASLNQRYFDTNRTILEMYSQQQQEKLGSAAANFFNSPNSLIGRSAASKPQTEFNKLPEQTGNGSTGGGFSCGMCERNDFKTEAEIHSHRKIVHNLKTGVSLRCAYCSGNFKSRSELEHHMKTCHNSTGKHKCNICDDIFPSPAILAEHKLQHSKVGQSGKCSNCGKALADVAAFKSHLLEHNTEGQMPVQCICCRQTLHSDFEIGLHAKFHTKSSNISENVCALCLEALPSTAETKVCEKCCRKHNLNAKLNSQRNFDSSSGSSNYVENRCNLCKVIMPHAQKLQEHLVEHTFAGCEDRGFTCYICSTVFTTPAGLLNHMPGHGSNSRPYDCNLCSEQFYFRAELDHHLVDHEIVDRLKNVLSDDNTSHMANGKKPLDESSTVEESPSTKRESKQFDDKAADEEDDEYIEVEKDPEIGHNDSGPSEKAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00992082;
- 90% Identity
- -
- 80% Identity
- -