Basic Information

Insect: Eumerus sabulonum
Gene Symbol: -
Assembly: GCA_951905685.1
Location: OX645060.1:3942651-3972039[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00041 0.072 14.7 0.5 5 23 317 336 314 336 0.93

2 8 0.079 14 7.5 1.6 3 23 344 365 343 365 0.94

3 8 0.088 16 7.3 1.4 3 21 376 394 375 396 0.93

4 8 1.2e-05 0.0022 19.5 3.4 1 23 405 427 405 427 0.99

5 8 9.5e-07 0.00017 23.0 0.1 1 23 433 455 433 455 0.98

6 8 4.6e-05 0.0082 17.7 1.8 1 23 461 483 461 483 0.98

7 8 3.6e-07 6.4e-05 24.3 1.9 1 23 489 511 489 511 0.98

8 8 0.029 5.2 8.9 1.3 1 17 517 533 517 534 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00041	0.072	14.7	0.5	5	23	317	336	314	336	0.93
2	8	0.079	14	7.5	1.6	3	23	344	365	343	365	0.94
3	8	0.088	16	7.3	1.4	3	21	376	394	375	396	0.93
4	8	1.2e-05	0.0022	19.5	3.4	1	23	405	427	405	427	0.99
5	8	9.5e-07	0.00017	23.0	0.1	1	23	433	455	433	455	0.98
6	8	4.6e-05	0.0082	17.7	1.8	1	23	461	483	461	483	0.98
7	8	3.6e-07	6.4e-05	24.3	1.9	1	23	489	511	489	511	0.98
8	8	0.029	5.2	8.9	1.3	1	17	517	533	517	534	0.94

Sequence Information

Coding Sequence: ATGGTCTCGATATGCCGCTTGTGTGCATCTCTGAAGAAAGCCGAGAGTTTGACGTTTATCCGTGACAGCAATCATGAGTTGTGTCAACGATTGTCGAAGTGCTGCCAACTCACGATTGACCTATCCGATGCACTGCCGAAAGGTGTGTGTCCGGAGTGTGTGCGCTCGTTGAATGCATCGTTTGAATTCTACGAGAGGGTGCACGAGTCGCAGCAGTCGCTACAGAAATTGCTTGGTGTCGTGTCGTCAGACGTTTCAAAAGATTGTTCGACTGTCGGGTCCGGGGAAGGGGAGAGGGAGCAGAAGGCAATGGCTGTGATAGCGGCGGCTGCGATCACCTCCGATGCTGGTAAATTCCCAACGAGGCAGTTGTCGCGTATGAATTCGAATGATTCGAATGGGCCGACAGTTCAGTTAAAGAGAGAGGATATCAGCGATGAAGTCGCAAGAACTATCAATGAAATACTGCTAACCAAAGAGGAGCAGACGTTCATGATTGATGACGATTCAGGGTGTCAGGCCGTGCCGGAGAAACCGAATGCGATTGAGAAATTCGAGCAAGAGGCTACAGGTCAGCAAGAACAAGAAGAGGAAAGTAGGTTCAATACGAGCGGCAACATCCTGCTCGACATCATTGAAGAAGACGACGACGGGATGGCCGTCGAGCACAATCGATACGAAATCATCGAAGaagacgatgatgacgacgacgacgtcgAGGAAACCATCCAACAATACGAAACAATCGAAATCGACGGCAACGATGACGATGACACACAATTCTCCATCGCCGAAATGAACGACGCGGACGTATCGAAAGGAACATGGACCGAGTACCCATGGAAATGCATCCGATGCTACGAAGAAGTCTTCTGCGCCAAAGATCTCATCGAACACAACCGAATCGAACACTCTGTTCAACCCATCGACGTTCAATGGCTCTGCATCGATTGCCAGAAAGCCTTCAATCGCTACTACAGCCTGATCAATCACATACGTCTTCGACATCGCACCCAACTCGCTCTGCTCTGTGACCTTTGCAACCTCGCCTGCACATCCTTCACCGAATTGGAAAAGCATCGTTCCGAATCGCACGCCCGCGAAGAGAATTTGATTATGATTCTCTGCGTGTTATGCGGCAAAGGCTTTCAAACAGTCAATTCGTTGCAAATTCACACCAAATGTCACCTGCCCGACGATGTTCGTTTGCGTTACCAATGCGATTTGTGCGAGAAGAAATTCCGCACATCCTCGAACCTGAAGTTCCATCAGAAAATGCACACGGGTACACGTGACTTTGTGTGCGATCAGTGCGGAAAGAATTTCATACAAAAAGCAAATCTGGAGGAGCATCTCGTGACACATCTCTCCCAGACGCCGTACGAGTGTTCGGTGTGCCAAAAACTgTTTAAGACGCCTGAAAGGTTGACGAGACATAAGCAGCGTCACACGGATGACAAACCATTTAGCTGCTCGGAATGTGAGAAGACATTTAGGACAAAGGATGCAATGTCTACACATATGAGAACGCATACAGGAGAGATGCCTTTCTCGTGTGAATTTTGCCAGAAACCATTCCGGTTCAGGAGCACGTTGacgGAGGATTTTTCAGCGGTTGTCAAAGAGGAATATCAGTATTCAACACTATCAGATCTAGAGCCGGCAGGTCCAAGTACAAGTAGCAGTAGTAATATCGAACCTGTAGTCGCCGAAAGGATGTCACCATCTAAGACGAAATTCTCGATTCCTCAAAATGTACCACTACCGCCACTTCCGGTCGGTTTGCAAATAAGATTCGAAGAGGAAGGAATAACTGCCAAAAATCGAAAATTTTTCATTGCACACTGGGGTTCCTATTTATGGAACGCGACCAACAAAGACCCTAAAAGGAAAGATTATAACCATTTGACTCAGAGCATCATAAGAGCCTATCCAAACCTTCGAGCAGGCGATGACGGATGTAGTTTGGTTCAGCTTGCGTTGAgtatttggattcgcaatcatCGTAGAAAAATCAAGATCGCATCTGCATATCAAGAAGTGGAGCGAAACCAGAACGAGAAAGCCACGTTACCTGTAGAAAATGCAACACTTGGCTTGTCTAACTCGTAA
Protein Sequence: MVSICRLCASLKKAESLTFIRDSNHELCQRLSKCCQLTIDLSDALPKGVCPECVRSLNASFEFYERVHESQQSLQKLLGVVSSDVSKDCSTVGSGEGEREQKAMAVIAAAAITSDAGKFPTRQLSRMNSNDSNGPTVQLKREDISDEVARTINEILLTKEEQTFMIDDDSGCQAVPEKPNAIEKFEQEATGQQEQEEESRFNTSGNILLDIIEEDDDGMAVEHNRYEIIEEDDDDDDDVEETIQQYETIEIDGNDDDDTQFSIAEMNDADVSKGTWTEYPWKCIRCYEEVFCAKDLIEHNRIEHSVQPIDVQWLCIDCQKAFNRYYSLINHIRLRHRTQLALLCDLCNLACTSFTELEKHRSESHAREENLIMILCVLCGKGFQTVNSLQIHTKCHLPDDVRLRYQCDLCEKKFRTSSNLKFHQKMHTGTRDFVCDQCGKNFIQKANLEEHLVTHLSQTPYECSVCQKLFKTPERLTRHKQRHTDDKPFSCSECEKTFRTKDAMSTHMRTHTGEMPFSCEFCQKPFRFRSTLTEDFSAVVKEEYQYSTLSDLEPAGPSTSSSSNIEPVVAERMSPSKTKFSIPQNVPLPPLPVGLQIRFEEEGITAKNRKFFIAHWGSYLWNATNKDPKRKDYNHLTQSIIRAYPNLRAGDDGCSLVQLALSIWIRNHRRKIKIASAYQEVERNQNEKATLPVENATLGLSNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -